; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008336 (gene) of Chayote v1 genome

Gene IDSed0008336
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG02:52209930..52213703
RNA-Seq ExpressionSed0008336
SyntenySed0008336
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]2.9e-3024.84Show/hide
Query:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSK---------
        V E+ +  G+WN + I+N+F  +D   IL +PR     DD + WH++  G +T++S + + ++L++   SS+  +S  WW ++W   +P+K         
Subjt:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSK---------

Query:  -------INLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG
                 L +R +     C+ C+   E+  H +W C      W+Q     V    +  +   ++L  ++ ++S+      +  WR+W  RN  V   G
Subjt:  -------INLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG

Query:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEA
           +   D+       +   +  EFR AN+    E+++ +    WK P +  +KIN D +  L + ++G+G+I R+++G  + A S  ++   + + +EA
Subjt:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEA

Query:  LAIKEGSNLS
         A  EG +L+
Subjt:  LAIKEGSNLS

XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]2.4e-2925.57Show/hide
Query:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------
        V ++++ + +W ++ I   F  ED   I+ I  P     D  LWHY+  G +++KS + + ++L+   +  ++D S + WN +W A +P KI        
Subjt:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------

Query:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG
                NL +R ++ + +C+RC    E   HA+ DC+  K  W+ +         +  ++  +L+   +K    ++E   ++CW IW  +NL +    
Subjt:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG

Query:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRR--WKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFV
         E  +L   R +         ++ F+   +     L  Q+ +R+  W PP    +KINVD A N++   +G+G+I RN  GEV+ A  ++    ++   +
Subjt:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRR--WKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFV

Query:  EALAI
        EA A+
Subjt:  EALAI

XP_021746406.1 uncharacterized protein LOC110712252 [Chenopodium quinoa]4.4e-3127.14Show/hide
Query:  MKVCEILNLD-GSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI-----
        +KV ++++   G W++ +++  F ++D+  IL +P    +G DV +W + N+G+FT+K+A+WLG+     P +S+N      W ++W+   P K+     
Subjt:  MKVCEILNLD-GSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI-----

Query:  -----------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMM---CWRIWNGRNL
                    L++R +  N +C+RC+   E   HA++ CR V++ W++SPF  +     T+       +F +    L  E+  +M    W +W  RN 
Subjt:  -----------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMM---CWRIWNGRNL

Query:  AV-LNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVV
         +  N+  +P  L     + V DY S   +     N        T      WK P     KINVD A    A   G+G++ARN  G ++F  +K++ G  
Subjt:  AV-LNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVV

Query:  NPKFVEALAIKEGSNLS----YVQFSWVSREANSLAHKL
        +P  +EA A   G  L+    Y    W+  +A ++  K+
Subjt:  NPKFVEALAIKEGSNLS----YVQFSWVSREANSLAHKL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.6e-3327.22Show/hide
Query:  DGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGI---ELRREPTSSNNDMSKAWWNYVWNATVPSKI------------
        +G W  D +++ F  ++   IL IP      +D ++W+YE  GV++++S + + +      + P+SS+++  + WWN  W   +P+KI            
Subjt:  DGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGI---ELRREPTSSNNDMSKAWWNYVWNATVPSKI------------

Query:  ----NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPY
            NL+KRG+     C  C  + E S H  W C+  +  W  S F  + P  I  E         + L+    EE  ++ W +WN RN    N  +   
Subjt:  ----NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPY

Query:  RLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK
         +F +  + V ++ + Y  EFR A  +  +  VT  A   W+PP +  YKIN D +       +G+G+I  N RG+VM A +K +  + +    EA+A  
Subjt:  RLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK

Query:  EGSNLS------------------------------YVQFSWVSREANSLAHKLARSAVL
        EG  L+                              +  F++V RE N  AH LAR A+L
Subjt:  EGSNLS------------------------------YVQFSWVSREANSLAHKLARSAVL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.0e-3127.42Show/hide
Query:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------
        V +++  D  W+E K++  F D D  +IL IP P E  +D VLWHY+  G +++KS + L +  +   ++S  + S  +W+ +W   +P K+        
Subjt:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------

Query:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG
                NL KR ++    CKRC   VE   HA+ +C+  +  W QSPF        + ++   L    K+L    +E    +CW  W  RN  + +  
Subjt:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG

Query:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEA
        E    +   + ++V        +  R   QS  S  + +K  + W PP Q  +K+NVD A N +   +G+G + R+  G+++ A   Q +   +    EA
Subjt:  EEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEA

Query:  LAIKEGSNLS
         A+  G  L+
Subjt:  LAIKEGSNLS

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189547.8e-3427.22Show/hide
Query:  DGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGI---ELRREPTSSNNDMSKAWWNYVWNATVPSKI------------
        +G W  D +++ F  ++   IL IP      +D ++W+YE  GV++++S + + +      + P+SS+++  + WWN  W   +P+KI            
Subjt:  DGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGI---ELRREPTSSNNDMSKAWWNYVWNATVPSKI------------

Query:  ----NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPY
            NL+KRG+     C  C  + E S H  W C+  +  W  S F  + P  I  E         + L+    EE  ++ W +WN RN    N  +   
Subjt:  ----NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPY

Query:  RLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK
         +F +  + V ++ + Y  EFR A  +  +  VT  A   W+PP +  YKIN D +       +G+G+I  N RG+VM A +K +  + +    EA+A  
Subjt:  RLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK

Query:  EGSNLS------------------------------YVQFSWVSREANSLAHKLARSAVL
        EG  L+                              +  F++V RE N  AH LAR A+L
Subjt:  EGSNLS------------------------------YVQFSWVSREANSLAHKLARSAVL

A0A803NML1 Uncharacterized protein3.3e-3228.96Show/hide
Query:  WNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKIN----------------L
        WN   + + F   D+ +IL IP     G D ++WH+  NG++++K+   L   L  + +SS ++    WW + WN  +P KI                 L
Subjt:  WNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKIN----------------L

Query:  NKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPYRLFDLR
         KR ++ +  C  C S+ E+  HA++ C+  K+ WK S F         M   D L            E    + W IW  RN  V   G +P       
Subjt:  NKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPYRLFDLR

Query:  CQNVWDYCSLYVEEFRAANQSIQSELVTQKAH------------RRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFV
           +  Y S + E+F  A   I S   T + H            +RW+PP++  YK+NVD ATN+E  + GIG I R+ +G V+ A+SK + G      +
Subjt:  CQNVWDYCSLYVEEFRAANQSIQSELVTQKAH------------RRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFV

Query:  EALAIKEGSNLSYVQFSWVSREANSLAH
        EA A+    N       WVS+    L H
Subjt:  EALAIKEGSNLSYVQFSWVSREANSLAH

A0A803P9P5 Uncharacterized protein5.1e-3327.24Show/hide
Query:  MKVCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKIN-----
        MKV E++     WN   ++  F + DV +I  IP  +    D ++W++ENNG++++KS + L   L  +  +++++ S  WW   W+ T+PSKI      
Subjt:  MKVCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKIN-----

Query:  -----------LNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLN
                   L+ R +  + +C  CH  +E++ HA++ C+  +  W+ S F         M + D+L    +  +S Q+E+F  + W IWN RN     
Subjt:  -----------LNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLN

Query:  KGEEPYRLFDLRCQNVWDYCSLYVEEFRA-------ANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVG
           +P  +          +   Y+EEF++       A+ +  +   +Q+    W  P     K+N D A N   N SG G I RN  G+++ A++    G
Subjt:  KGEEPYRLFDLRCQNVWDYCSLYVEEFRA-------ANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVG

Query:  VVNPKFVEALAI
           P+ +EALA+
Subjt:  VVNPKFVEALAI

A0A803PVI9 Uncharacterized protein3.9e-3327.65Show/hide
Query:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------
        V   +  D  WN + + +TF   DV ++L IP  +    D ++W++E NG +T+KS + L   L  +  +++    + WWN  W+ T+PSK+        
Subjt:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKI--------

Query:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG
                 L+ R +  + +C  C +  E + HA++ C+  +  W+ S F      +  M + +L+L      ++LQ+E+F  + W IWN RN       
Subjt:  --------NLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKG

Query:  EEPYRLFDLRCQNVWDYCSL-YVEEFRAANQ-------SIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGV
         +PY        N+ +Y +L Y+E+++AA +       +     + QK    W  P     K+N D A N     +G G I R+  GE++ A SK ++G 
Subjt:  EEPYRLFDLRCQNVWDYCSL-YVEEFRAANQ-------SIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGV

Query:  VNPKFVEALAI
          P+ +EALA+
Subjt:  VNPKFVEALAI

A0A803QQT2 Uncharacterized protein3.2e-3529.78Show/hide
Query:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSK---------
        V ++   DG W+E  I++ F   DV  ILGIP      +D +LWHY   G +++KS + +      E   SN      WW  +W   +P K         
Subjt:  VCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSK---------

Query:  -------INLNKRGMICNVLCKRCHSHVEASF-HAIWDCRCVKNYWKQSPFFH-----VGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNL
               +NL KRG+  +V+C RC SHV+ S  HA+W+C+  K YW+ S  +      +G  N+TM +     W  +KL     E F ++ W IWN RN 
Subjt:  -------INLNKRGMICNVLCKRCHSHVEASF-HAIWDCRCVKNYWKQSPFFH-----VGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNL

Query:  AVLNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVN
         V++ G  P      + + + ++C  ++ +FR      +S+  ++ +  RW PP +    INVD         SG+G + R+  G V+ A +  +   + 
Subjt:  AVLNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVN

Query:  PKFVEALAIKEGSNLSYVQ
        P  +E +AIK+G  +   Q
Subjt:  PKFVEALAIKEGSNLSYVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-0525Show/hide
Query:  CKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFK------KLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPYRLFDLR--CQ
        C RC    E   H ++ C   +  W  SP         T  +   L W         KL  +     +++ WR+W  RN  ++ KG+E      LR   +
Subjt:  CKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFK------KLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPYRLFDLR--CQ

Query:  NVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK
        +  ++ +    E +A+   ++  L  Q     WK P     K N D    LE  R GIG I RN  G V++  ++ +    N    E  A++
Subjt:  NVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIK

AT3G09510.1 Ribonuclease H-like superfamily protein3.1e-1423.46Show/hide
Query:  WNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSS---------NNDMSKAWWN---------YVWNA---TVP
        W++ KI       D   I  I        D ++W+Y   G +T++S +WL   L  +P+++         + D+    WN         ++W A    + 
Subjt:  WNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSS---------NNDMSKAWWN---------YVWNA---TVP

Query:  SKINLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWK-----------QSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNL
        +   L  RGM  +  C RCH   E+  HA++ C      W+            S  F     NI   V D  +  F KL  +       + WRIW  RN 
Subjt:  SKINLNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWK-----------QSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNL

Query:  AVLNK-GEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVV
         V NK  E P +          D+  L   +      S   ++   K    W+ P     K N D   +++   +  G I RN  G  +   S ++    
Subjt:  AVLNK-GEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQSELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVV

Query:  NPKFVEALAIKEGSNLSYVQFSWV
        NP   E  A+     L+ +Q +W+
Subjt:  NPKFVEALAIKEGSNLSYVQFSWV

AT4G29090.1 Ribonuclease H-like superfamily protein4.0e-1424.42Show/hide
Query:  MKVCEILNLDG-SWNEDKIKNTFCDEDVVQILGIPRP--MEIGDDVVLWHYENNGVFTIKSAHWLGIEL---RREPTSSNNDMSKAWWNYVWNATVPSKI
        +KV ++++  G  W +D I+  F  E   +++G  RP    I D    W Y ++G +T+KS +W+  ++   R  P   +       +  +W +    KI
Subjt:  MKVCEILNLDG-SWNEDKIKNTFCDEDVVQILGIPRP--MEIGDDVVLWHYENNGVFTIKSAHWLGIEL---RREPTSSNNDMSKAWWNYVWNATVPSKI

Query:  N----------------LNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADL----LLWFFKKLN-SLQMEEFFM----
                         L  R +     C RC S  E   H ++ C   +  W  S      P  +  E AD     L W F   N + Q E+       
Subjt:  N----------------LNKRGMICNVLCKRCHSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADL----LLWFFKKLN-SLQMEEFFM----

Query:  MCWRIWNGRNLAVLNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQ---SELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGE
        + WR+W  RN       E  +R  +   Q V       +EE+R   ++        V + +  RW+PP     K N D   N +  R GIG + RN +GE
Subjt:  MCWRIWNGRNLAVLNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQ---SELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGE

Query:  VMFAISKQIVGVVNPKFVEALAIKEG-SNLSYVQFSWVSREANS
        V +  ++ +  + +    E  A++    +LS  Q+++V  E++S
Subjt:  VMFAISKQIVGVVNPKFVEALAIKEG-SNLSYVQFSWVSREANS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTTGTGAGATTCTAAATCTTGATGGAAGCTGGAATGAGGATAAAATTAAAAATACCTTTTGTGATGAGGATGTAGTGCAAATTTTGGGTATTCCAAGACCGAT
GGAGATAGGAGATGATGTTGTATTGTGGCACTATGAGAACAATGGAGTGTTTACGATTAAGTCAGCTCATTGGCTTGGTATCGAACTAAGGAGGGAGCCTACTTCATCAA
ATAACGACATGTCAAAAGCTTGGTGGAACTACGTTTGGAATGCAACAGTCCCTAGTAAGATCAATTTAAATAAAAGAGGAATGATTTGTAATGTGCTTTGCAAGAGATGC
CACTCTCATGTGGAAGCAAGTTTCCATGCGATTTGGGATTGCAGATGTGTTAAAAATTATTGGAAGCAGTCTCCTTTCTTTCATGTTGGACCGCCAAACATTACGATGGA
AGTGGCAGATTTGCTACTTTGGTTTTTTAAGAAGTTGAATTCTTTGCAAATGGAGGAGTTTTTTATGATGTGCTGGCGGATATGGAATGGAAGAAATTTGGCCGTGCTTA
ATAAAGGGGAGGAACCTTATAGGCTTTTCGATCTTAGGTGTCAAAATGTTTGGGATTATTGTTCGCTATATGTTGAGGAGTTTAGAGCTGCTAATCAATCTATTCAGTCT
GAATTGGTTACACAAAAGGCTCATAGAAGGTGGAAACCACCTTTACAGATTAATTACAAAATTAATGTGGATGTCGCAACAAATCTAGAAGCTAATAGAAGTGGGATCGG
TTTAATTGCTAGAAATTGGAGGGGAGAGGTGATGTTCGCAATCTCTAAACAAATCGTTGGGGTGGTGAACCCGAAGTTTGTGGAAGCTTTGGCTATTAAAGAAGGTTCTA
ATCTAAGCTACGTCCAATTTTCATGGGTTAGCCGTGAAGCAAACTCTTTGGCACACAAGCTCGCTCGCTCTGCGGTTTTAGAGACGGTTGAGCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTTGTGAGATTCTAAATCTTGATGGAAGCTGGAATGAGGATAAAATTAAAAATACCTTTTGTGATGAGGATGTAGTGCAAATTTTGGGTATTCCAAGACCGAT
GGAGATAGGAGATGATGTTGTATTGTGGCACTATGAGAACAATGGAGTGTTTACGATTAAGTCAGCTCATTGGCTTGGTATCGAACTAAGGAGGGAGCCTACTTCATCAA
ATAACGACATGTCAAAAGCTTGGTGGAACTACGTTTGGAATGCAACAGTCCCTAGTAAGATCAATTTAAATAAAAGAGGAATGATTTGTAATGTGCTTTGCAAGAGATGC
CACTCTCATGTGGAAGCAAGTTTCCATGCGATTTGGGATTGCAGATGTGTTAAAAATTATTGGAAGCAGTCTCCTTTCTTTCATGTTGGACCGCCAAACATTACGATGGA
AGTGGCAGATTTGCTACTTTGGTTTTTTAAGAAGTTGAATTCTTTGCAAATGGAGGAGTTTTTTATGATGTGCTGGCGGATATGGAATGGAAGAAATTTGGCCGTGCTTA
ATAAAGGGGAGGAACCTTATAGGCTTTTCGATCTTAGGTGTCAAAATGTTTGGGATTATTGTTCGCTATATGTTGAGGAGTTTAGAGCTGCTAATCAATCTATTCAGTCT
GAATTGGTTACACAAAAGGCTCATAGAAGGTGGAAACCACCTTTACAGATTAATTACAAAATTAATGTGGATGTCGCAACAAATCTAGAAGCTAATAGAAGTGGGATCGG
TTTAATTGCTAGAAATTGGAGGGGAGAGGTGATGTTCGCAATCTCTAAACAAATCGTTGGGGTGGTGAACCCGAAGTTTGTGGAAGCTTTGGCTATTAAAGAAGGTTCTA
ATCTAAGCTACGTCCAATTTTCATGGGTTAGCCGTGAAGCAAACTCTTTGGCACACAAGCTCGCTCGCTCTGCGGTTTTAGAGACGGTTGAGCACTAA
Protein sequenceShow/hide protein sequence
MKVCEILNLDGSWNEDKIKNTFCDEDVVQILGIPRPMEIGDDVVLWHYENNGVFTIKSAHWLGIELRREPTSSNNDMSKAWWNYVWNATVPSKINLNKRGMICNVLCKRC
HSHVEASFHAIWDCRCVKNYWKQSPFFHVGPPNITMEVADLLLWFFKKLNSLQMEEFFMMCWRIWNGRNLAVLNKGEEPYRLFDLRCQNVWDYCSLYVEEFRAANQSIQS
ELVTQKAHRRWKPPLQINYKINVDVATNLEANRSGIGLIARNWRGEVMFAISKQIVGVVNPKFVEALAIKEGSNLSYVQFSWVSREANSLAHKLARSAVLETVEH