; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008360 (gene) of Chayote v1 genome

Gene IDSed0008360
OrganismSechium edule (Chayote v1)
DescriptionMaternal effect embryo arrest
Genome locationLG03:4630419..4631439
RNA-Seq ExpressionSed0008360
SyntenySed0008360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138443.1 uncharacterized protein LOC101208865 [Cucumis sativus]2.3e-7988.37Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+++P CLAGPSVA NLV+FHVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T LR+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

XP_022134461.1 uncharacterized protein LOC111006700 [Momordica charantia]1.4e-8191.28Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV+NP CLA PS+AENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        ++ LR+GML+SGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

XP_022962637.1 uncharacterized protein LOC111463051 [Cucurbita moschata]1.9e-8191.86Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVE+P CLA P+VAENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T +R+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

XP_022990564.1 uncharacterized protein LOC111487406 [Cucurbita maxima]1.1e-8191.86Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVE+P CLA P+VAENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T +R+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

XP_038885575.1 uncharacterized protein LOC120075905 [Benincasa hispida]4.2e-8191.28Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNL+++P CLAGPSVA NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T +R+GMLVSGIGSVCGCGFLM+ALINV QIKLG LSCGSSQT+AAVVPLVILVPFAL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

TrEMBL top hitse value%identityAlignment
A0A0A0KA88 Uncharacterized protein1.1e-7988.37Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+++P CLAGPSVA NLV+FHVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T LR+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

A0A5D3DL39 Uncharacterized protein1.5e-7988.95Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+++P CLAGPSVA NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T LR+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

A0A6J1BXU9 uncharacterized protein LOC1110067007.0e-8291.28Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV+NP CLA PS+AENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        ++ LR+GML+SGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

A0A6J1HD70 uncharacterized protein LOC1114630519.1e-8291.86Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVE+P CLA P+VAENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T +R+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

A0A6J1JSD7 uncharacterized protein LOC1114874065.3e-8291.86Show/hide
Query:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVE+P CLA P+VAENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN
        +T +R+GMLVSGIGSVCGCGFLM+ALINV QIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Subjt:  QTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein4.7e-3044.91Show/hide
Query:  TSIHMSALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQTV
        TS+H++ALDGIV+ NS+FT+AVF+G++++ P+D T  L +   C AG  V  +LV F V SF+ FLFSSL+A G+K AI +  S       F   +N+ V
Subjt:  TSIHMSALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQTV

Query:  LRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF
        LR G++ +  GS+ GC FL++++++V Q++LG LSCG++     V+ LV+LV  AL +YI  V Y+F
Subjt:  LRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF

AT3G07510.1 unknown protein4.1e-3451.19Show/hide
Query:  AGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQT
        A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L +   C A   VA+ L+ F V SFS FLFSSL+A GLK A+ +  S   +   F   +N  
Subjt:  AGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQT

Query:  VLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF
        VLR GM+ S +GSV GC FLM++++NV QI+LG LSCGS     AV  LV LV  ALLIYI    YAF
Subjt:  VLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF

AT3G07510.2 unknown protein4.1e-3451.19Show/hide
Query:  AGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQT
        A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L +   C A   VA+ L+ F V SFS FLFSSL+A GLK A+ +  S   +   F   +N  
Subjt:  AGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQT

Query:  VLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF
        VLR GM+ S +GSV GC FLM++++NV QI+LG LSCGS     AV  LV LV  ALLIYI    YAF
Subjt:  VLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)1.8e-3451.35Show/hide
Query:  TSIHMSALDGIVNVNSMFTLAVFLGLAWNPN---DPTNNLVEN---PRCLA--GPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PT
        T IH++A+DGIVNVNS+F+LA+FLGL  + N     +++  EN    RC++  GP++AE LV+ HVYSFS FLFSSLIA+ LKQAIR + +         
Subjt:  TSIHMSALDGIVNVNSMFTLAVFLGLAWNPN---DPTNNLVEN---PRCLA--GPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PT

Query:  EFFV------RVNQTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLVSYAFI
        E  V      RVN   LR+G++ S + SV GCGFL +AL+++ QIKLG L C  S    AA+VPLV+LVP AL+IY+ LV YAFI
Subjt:  EFFV------RVNQTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLVSYAFI

AT5G05950.1 maternal effect embryo arrest 605.3e-5868.21Show/hide
Query:  TSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVR
        TSIH++ALDGIVNVNS+FTLAVF+GLAWNP DP N+LV +P C+    +AENLVAFHVYSF+SFLFSSLIALGLKQA+R++ +  +H      P  ++  
Subjt:  TSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVR

Query:  VNQTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLVSYAF
        VN+T LR GM+ SG+GSVCGCGFLM+ALINV QIKLGTL CG+S  TYAAVVPLVILVP AL IY+ L+ YAF
Subjt:  VNQTVLRLGMLVSGIGSVCGCGFLMIALINVAQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLVSYAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCGGGCACAAGCATCCACATGTCCGCCCTAGACGGCATAGTAAACGTCAATTCCATGTTCACCCTCGCCGTCTTCCTAGGGCTAGCCTGGAACCCCAACGATCC
GACGAACAATCTCGTCGAAAATCCTCGCTGCTTGGCCGGCCCTTCGGTCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAA
TCGCTCTCGGCCTCAAACAGGCCATTCGGATCTCCAAAAGCCCGTTCTACCACCCGACCGAGTTCTTCGTCCGGGTCAACCAAACCGTGCTCCGGCTCGGGATGCTCGTC
TCCGGAATCGGATCGGTCTGCGGCTGCGGCTTTCTCATGATCGCGCTCATCAATGTTGCTCAGATCAAGCTTGGGACGCTGAGTTGCGGCAGCTCTCAGACGTACGCGGC
GGTGGTGCCGCTCGTGATCTTGGTTCCGTTCGCTCTTTTGATTTACATCTGCCTTGTTTCTTACGCTTTCATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ACGACATGTCGAAGGCGAAGTCTCCGCTATTTTGTCGGTTTTGAAGGACGTCATGTCGTTCGAATAAAAAAAACCAAAAGCATTTTAGTTTCTACCCACTTTACCAATCG
CGTCCCGACCACTACGCGTTTCTAGCCCTAAATCCACTCCAACCCCGCCGGAATCCGCCCGTCCTCCGCCGTCAGCAACAATGCCGGCGGGCACAAGCATCCACATGTCC
GCCCTAGACGGCATAGTAAACGTCAATTCCATGTTCACCCTCGCCGTCTTCCTAGGGCTAGCCTGGAACCCCAACGATCCGACGAACAATCTCGTCGAAAATCCTCGCTG
CTTGGCCGGCCCTTCGGTCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCTCTCGGCCTCAAACAGGCCATTCGGA
TCTCCAAAAGCCCGTTCTACCACCCGACCGAGTTCTTCGTCCGGGTCAACCAAACCGTGCTCCGGCTCGGGATGCTCGTCTCCGGAATCGGATCGGTCTGCGGCTGCGGC
TTTCTCATGATCGCGCTCATCAATGTTGCTCAGATCAAGCTTGGGACGCTGAGTTGCGGCAGCTCTCAGACGTACGCGGCGGTGGTGCCGCTCGTGATCTTGGTTCCGTT
CGCTCTTTTGATTTACATCTGCCTTGTTTCTTACGCTTTCATCAATTAGATCGTTGAGTGTTTGCTGAATTTGTGGCTGATTGTTCTTGATTTTGGTTTGATGTTGATTT
GTGTTGCGTGTAGTGTTTTATCATCGGAGGAATTTGAAATCTTCTGTTTCTGTATGAATTTGAATCTTCTTGTTGAACTGTGTTTGAAATTATTTTGTTTGTGTAGATTG
AATCGACTCCAGAATTCCAGATCTTGTTCAGTCTATTTTGCTTCGACTGCGAAGAAAATGGTGAGAAAACAAGAAGCTCGGTAAATAGTACTTTTGTTTTTTTTTTCTTT
TTTAAATATCCTAATAATCAATGTTTGCCGA
Protein sequenceShow/hide protein sequence
MPAGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVENPRCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNQTVLRLGMLV
SGIGSVCGCGFLMIALINVAQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN