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Sed0008372 (gene) of Chayote v1 genome

Gene IDSed0008372
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG10:28221896..28222363
RNA-Seq ExpressionSed0008372
SyntenySed0008372
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152801.1 probable calcium-binding protein CML11 [Cucumis sativus]8.0e-3957.31Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQ---VFNNQESMTPKSYTNFAH----------KRQSLD---GEPPSSNVQLSRET
        MS S  QAW ++EA+ LIKKYD+NGDG L KEEL+  L+  RG TQ   + N   S  PK+  N A           K+Q LD   G    SNV LSRE 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQ---VFNNQESMTPKSYTNFAH----------KRQSLD---GEPPSSNVQLSRET

Query:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        IKEIFKYHD++KDGFL+I+ELTKAF+ MGSIVP  KA Y +AYAD D DGL+SE EL KLIDYA K I KK
Subjt:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

XP_022951134.1 uncharacterized protein LOC111454074 isoform X1 [Cucurbita moschata]1.9e-4056.74Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN
        M +SK Q   EDEA+RL+KKYD NGDG L KEEL+  L K RG TQ+ NNQ   S  PK+  N AHK  S                     LDGE   S 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF+F+GSI+P  KAHY +AYAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

XP_023002688.1 calcium-binding protein H-like isoform X1 [Cucurbita maxima]2.7e-3954.8Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESM--TPKSYTNFAHKRQS---------------------LDGEPPSSN
        MS+SK Q W EDEA+RL+KKYD NGDG L KEEL+  L K RG  Q+ NNQ  +   PK+  N AH+  S                      DGE   S 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESM--TPKSYTNFAHKRQS---------------------LDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINK
        ++LSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSI+P  KAHY +AYAD ++DGLISE EL KLIDYA+K INK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINK

XP_023538534.1 putative calmodulin-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo]6.5e-4156.18Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN
        M +SK Q W EDEA+RL+KKYD NGDG L KEEL+  L K RG TQ+ NNQ   S  PK+  N  HK  S                     LDGE   S 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSI+P  KAHY + YAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]1.5e-3751.96Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ---ESMTPKSYTNFAHKRQS---------------------LDGEPPSS
        MS S+ QAW E+EA+ LIKKYD+NGDG L KEEL+  L  T   TQ+ N +     M PK+  N  HK  S                     LD +   S
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ---ESMTPKSYTNFAHKRQS---------------------LDGEPPSS

Query:  NVQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        N+  SRE IKEIFKYHD++KDGFLNI+ELTK F  +GS++P +KAHY +AYADAD DGLISE+EL +LIDY  K I KK
Subjt:  NVQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRC8 Uncharacterized protein3.9e-3957.31Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQ---VFNNQESMTPKSYTNFAH----------KRQSLD---GEPPSSNVQLSRET
        MS S  QAW ++EA+ LIKKYD+NGDG L KEEL+  L+  RG TQ   + N   S  PK+  N A           K+Q LD   G    SNV LSRE 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQ---VFNNQESMTPKSYTNFAH----------KRQSLD---GEPPSSNVQLSRET

Query:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        IKEIFKYHD++KDGFL+I+ELTKAF+ MGSIVP  KA Y +AYAD D DGL+SE EL KLIDYA K I KK
Subjt:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

A0A6J1GHU7 uncharacterized protein LOC111454074 isoform X19.2e-4156.74Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN
        M +SK Q   EDEA+RL+KKYD NGDG L KEEL+  L K RG TQ+ NNQ   S  PK+  N AHK  S                     LDGE   S 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQ--ESMTPKSYTNFAHKRQS---------------------LDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF+F+GSI+P  KAHY +AYAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

A0A6J1GII5 probable calcium-binding protein CML112.1e-3754.55Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQE--SMTPKSYTNFAHKRQSLDGEPPS-------------------SNVQ
        MS S  QAW E++A+ LIKKYDKNGDG L KEEL+  L+  RG TQ+ NNQ   S  P++    AHK  S     P                    SNV 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQE--SMTPKSYTNFAHKRQSLDGEPPS-------------------SNVQ

Query:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        LSRE IK+IFKY+D+DKDGFLNI+E+TKAF+F+GSI P +KA Y + +ADA+NDGLISE EL KLIDYA K I KK
Subjt:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

A0A6J1KM01 probable calcium-binding protein CML116.2e-3753.14Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQV-FNNQESMTPKSYTNFAHKRQSLDGEPPS-------------------SNVQL
        MS S  Q W E+EA+ L+KKYDKNGDG L KEEL+  L+  RG TQ+ +    S  PK+    AHK  S     P                    SNV L
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQV-FNNQESMTPKSYTNFAHKRQSLDGEPPS-------------------SNVQL

Query:  SRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK
        SRE IK+IFKY+D+DKDGFLNI+E+TKAF+F+GSI P +KA Y + +ADA+NDGLISE EL KLIDYA K I KK
Subjt:  SRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK

A0A6J1KUA8 calcium-binding protein H-like isoform X11.3e-3954.8Show/hide
Query:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESM--TPKSYTNFAHKRQS---------------------LDGEPPSSN
        MS+SK Q W EDEA+RL+KKYD NGDG L KEEL+  L K RG  Q+ NNQ  +   PK+  N AH+  S                      DGE   S 
Subjt:  MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESM--TPKSYTNFAHKRQS---------------------LDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINK
        ++LSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSI+P  KAHY +AYAD ++DGLISE EL KLIDYA+K INK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINK

SwissProt top hitse value%identityAlignment
Q9M7R0 Calcium-binding allergen Ole e 81.7e-0426.17Show/hide
Query:  SSKPQAWVED--EAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMTPKSYTNFAHKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFL
        +SKP  ++++  E   +  ++D NGDG +  +EL  +L+     T                                   S+E I  I +  DTDKDGF+
Subjt:  SSKPQAWVED--EAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMTPKSYTNFAHKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFL

Query:  NIKELTKAFAFMGSIVPHFKAHYVLAYA----DADNDGLISEIELHKLI
        N++E            P       L  A    D D++GLIS +ELHK++
Subjt:  NIKELTKAFAFMGSIVPHFKAHYVLAYA----DADNDGLISEIELHKLI

Arabidopsis top hitse value%identityAlignment
AT2G43290.1 Calcium-binding EF-hand family protein8.0e-0526.75Show/hide
Query:  SSSKPQAWVE-DEAHRLIKKYDKNGDGCLYKEELKFLLQK------TRGLTQVFNNQESMTP--KSYTNFAHKRQSLDGEPPSSNVQLSRETIKEIFKYH
        SSS P   ++  E  R+ + +DKNGDG + KEEL   L+        + LTQ+ +  ++          F     S+  E  +   +   E +K+ F   
Subjt:  SSSKPQAWVE-DEAHRLIKKYDKNGDGCLYKEELKFLLQK------TRGLTQVFNNQESMTP--KSYTNFAHKRQSLDGEPPSSNVQLSRETIKEIFKYH

Query:  DTDKDGFLNIKELTKAFAFMGSIVPHFK----AHYVLAYADADNDGLISEIELHKLI
        D D DGF+ ++EL    A +G  +   K       ++   DAD DG ++  E  +++
Subjt:  DTDKDGFLNIKELTKAFAFMGSIVPHFK----AHYVLAYADADNDGLISEIELHKLI

AT4G12860.1 EF hand calcium-binding protein family6.8e-0426.39Show/hide
Query:  EAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMTPKSYTN---------FAHKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFLNIK
        E  R+ + +DKNGDG + K ELK    K+ G+    N    M  K   N         F    Q +  E      +   E ++E F+  D + DGF+  +
Subjt:  EAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMTPKSYTN---------FAHKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFLNIK

Query:  ELTKAFAFMGSIVPHF--KAHYVLAYADADNDGLISEIELHKLI
        EL    A MG            +++  D D DG+++  E  +++
Subjt:  ELTKAFAFMGSIVPHF--KAHYVLAYADADNDGLISEIELHKLI

AT5G37770.1 EF hand calcium-binding protein family2.3e-0424.48Show/hide
Query:  DEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMT-PKSYTNFAHKRQSLD--------GEPPSSNVQLSRETIKEIFKYHDTDKDGFLNI
        D+  ++ +++DKNGDG +  +ELK ++   R L+   + +E++T  K +    +    LD        G     N +     +KE F+ +D D +G ++ 
Subjt:  DEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMT-PKSYTNFAHKRQSLD--------GEPPSSNVQLSRETIKEIFKYHDTDKDGFLNI

Query:  KELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLI
        KEL      +G          +++  D D DG ++  E  K++
Subjt:  KELTKAFAFMGSIVPHFKAHYVLAYADADNDGLISEIELHKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCCAAACCCCAAGCATGGGTTGAAGATGAAGCACATCGACTAATCAAGAAGTATGACAAAAATGGAGATGGCTGTCTCTATAAAGAAGAGCTGAAGTTCCT
CCTCCAAAAAACTCGAGGCTTAACACAAGTTTTCAACAATCAAGAATCTATGACTCCAAAATCTTATACCAATTTTGCTCACAAGCGACAGTCACTTGATGGAGAGCCAC
CGTCATCTAATGTTCAACTTAGTCGAGAGACAATTAAGGAGATTTTCAAATACCATGATACCGACAAGGATGGTTTTCTTAACATTAAAGAGTTAACAAAAGCTTTTGCT
TTTATGGGTTCAATTGTTCCTCACTTTAAAGCTCATTATGTTTTGGCTTATGCTGATGCTGATAATGATGGTCTTATCAGTGAAATTGAGCTTCACAAACTTATAGATTA
TGCAACTAAAACAATCAACAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCCAAACCCCAAGCATGGGTTGAAGATGAAGCACATCGACTAATCAAGAAGTATGACAAAAATGGAGATGGCTGTCTCTATAAAGAAGAGCTGAAGTTCCT
CCTCCAAAAAACTCGAGGCTTAACACAAGTTTTCAACAATCAAGAATCTATGACTCCAAAATCTTATACCAATTTTGCTCACAAGCGACAGTCACTTGATGGAGAGCCAC
CGTCATCTAATGTTCAACTTAGTCGAGAGACAATTAAGGAGATTTTCAAATACCATGATACCGACAAGGATGGTTTTCTTAACATTAAAGAGTTAACAAAAGCTTTTGCT
TTTATGGGTTCAATTGTTCCTCACTTTAAAGCTCATTATGTTTTGGCTTATGCTGATGCTGATAATGATGGTCTTATCAGTGAAATTGAGCTTCACAAACTTATAGATTA
TGCAACTAAAACAATCAACAAAAAATGA
Protein sequenceShow/hide protein sequence
MSSSKPQAWVEDEAHRLIKKYDKNGDGCLYKEELKFLLQKTRGLTQVFNNQESMTPKSYTNFAHKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFLNIKELTKAFA
FMGSIVPHFKAHYVLAYADADNDGLISEIELHKLIDYATKTINKK