; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008387 (gene) of Chayote v1 genome

Gene IDSed0008387
OrganismSechium edule (Chayote v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationLG08:3185622..3190605
RNA-Seq ExpressionSed0008387
SyntenySed0008387
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]7.6e-14188.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+NVPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

KAG7023385.1 Replication protein A 32 kDa subunit B [Cucurbita argyrosperma subsp. argyrosperma]7.6e-14188.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+NVPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]5.8e-14189.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQ TQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSD+KSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNT+LRKQQSSS TTQP M NLSNTP+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGD WK++EQ +LD+LQLP+CD+ RGAHRDVIA+ + VPLEKLIPA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

XP_022922070.1 replication protein A 32 kDa subunit B-like isoform X1 [Cucurbita moschata]2.2e-14088.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+NVPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

XP_023516911.1 replication protein A 32 kDa subunit B-like isoform X1 [Cucurbita pepo subsp. pepo]3.8e-14088.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+ VPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like2.8e-14189.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQ TQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSD+KSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNT+LRKQQSSS TTQP M NLSNTP+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGD WK++EQ +LD+LQLP+CD+ RGAHRDVIA+ + VPLEKLIPA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like2.8e-14189.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQ TQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSD+KSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNT+LRKQQSSS TTQP M NLSNTP+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGD WK++EQ +LD+LQLP+CD+ RGAHRDVIA+ + VPLEKLIPA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X11.1e-14088.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+NVPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

A0A6J1EU79 replication protein A 32 kDa subunit B-like5.9e-13988.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQATQAPD SFSPAKNRDVQ+LLPLTVKQINDAFLSS ++SNFVIDGVDVNNVKLVGMVRNRAGRITDVTF+LDDGTG ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        C+KWVNEAADS+EVEGILDGMYVRVHGHLKSF+G RTLNVFSIRPVTDYNEITSHFIECIYVHFYNT+LRKQQSSS TTQP +PNLSNTP KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQVGGDGWK++EQKILD+LQLP+CD  RGAHRDVIA+H+ VPLEKLIPA+KNLEEEGL+YSTTD+ HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

A0A6J1JJ51 replication protein A 32 kDa subunit B4.1e-14088.09Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQ T APDHS SPAKNRDVQALLPLTVKQINDAFLSSD+KSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSF+GKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNT+LRKQQSSS T QP M NLSNTP++GYQ P+ N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        QY GQ GGDGWK +EQ +LD+LQLP+CD  RGAHRDVIA+H+ VPLEKL+PA+KNLEEEGLIYSTTDD HFKSTANG
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.0e-2334.8Show/hide
Query:  FSGGGFMPSQATQAPDHSF-----------SPAKNRD--VQALLPLTVKQINDAF---LSSDEKSN--FVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        FSG   MPSQ + AP   +           SP+K RD      +P TV  I+ +F   L++D   +  F IDGV+  NV+++G V +   R TDV F LD
Subjt:  FSGGGFMPSQATQAPDHSF-----------SPAKNRD--VQALLPLTVKQINDAF---LSSDEKSN--FVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHF--YNTKLRKQQSSSTTTQPTMPNLSNTPM
        D TG+I   +W+ + +D+ +   I +G+YV+V  +L  F+ K+     SIRP+ ++NE+  HFIEC++VH     +K+++Q   S  T       S+  +
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHF--YNTKLRKQQSSSTTTQPTMPNLSNTPM

Query:  KGYQ
        + YQ
Subjt:  KGYQ

Q5Z8L1 Replication protein A 32 kDa subunit C6.9e-0435.94Show/hide
Query:  EQKILDYLQLPTCDNV-RGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
        ++ +L+ LQ P    +  GAH D + R   +P   ++  VK+L   G +Y T DD H KS  NG
Subjt:  EQKILDYLQLPTCDNV-RGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

Q6H7J5 Replication protein A 32 kDa subunit B4.0e-5237.85Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQATQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        G  +DG     ++ F GGGFMPSQAT A + +        K+R+ QALLPLTVKQI DA  ++D+KSNF ++G++V+ V+LVG + N+  R+TDV+F LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQATQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKG
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK F+GKR +  +S+R +T++N++T HF+ C++VH   T+ + Q +++T T      +    M  
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKG

Query:  YQAPIPNQ----YPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG
         Q+P+ NQ       Q  G G   ++  +  +      ++  G   D ++R +N+P E +   + +  + G +Y+T DD H+KST NG
Subjt:  YQAPIPNQ----YPGQVGGDGWKTVEQKILDYLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A6.9e-4439.05Show/hide
Query:  AFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE
        AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ ++ + FV+DGV+  NV+LVG+V  +  R TDV+F +DDGTGR+D  +WVN+
Subjt:  AFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE

Query:  AADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPI---PNQYPG
         ADS E   + +GMYV V G LK  + ++    F+IRPVTDYNE+T HFI+C+ +H  NTK   Q  S   T   M + S+        P     N  P 
Subjt:  AADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPI---PNQYPG

Query:  QVGGDGWKT-VEQKILDYLQLP-TCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN
            +G KT +  ++L+  + P   ++  G H D I +   +P  K+  A+  L + G IYST D+ H+KS  N
Subjt:  QVGGDGWKT-VEQKILDYLQLP-TCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B7.8e-7251.07Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQAT     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTTTQPTMP-NLSNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK F+GKR++NVFS+RPVTD+NEI  HF EC+YVH YNTKLR       + T +P MP +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTTTQPTMP-NLSNTPMKGYQAP

Query:  IPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN
          NQ+P Q   D    V+Q +L+YL  P    +  G H D+IAR + +PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN

Q9ZQ19 Replication protein A 32 kDa subunit A1.1e-6547.99Show/hide
Query:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS EKS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN
        +WV+E  D+ E+E + DG YVR+ GHLK+F+GK  L VFS+RP+ D+NE+T H+IECI+ +  N++ ++QQ    T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK
               G+G K ++  ILDYL+ P C    +G H D IA+ + +P  KL   V++LE +GLIYST D+ HFK
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK

Arabidopsis top hitse value%identityAlignment
AT1G07130.1 Nucleic acid-binding, OB-fold-like protein8.4e-0524.26Show/hide
Query:  LTVKQINDAFLSSDEKSNF-VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR
        L  + I     S  E ++F ++ G  V+ V++VG + +R      + F +DDGTG + C  W+N+   S                   +   I  G   R
Subjt:  LTVKQINDAFLSSDEKSNF-VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR

Query:  VHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECI
        V G + S+ G   +         D N    H++EC+
Subjt:  VHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECI

AT2G24490.1 replicon protein A27.7e-6747.99Show/hide
Query:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS EKS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN
        +WV+E  D+ E+E + DG YVR+ GHLK+F+GK  L VFS+RP+ D+NE+T H+IECI+ +  N++ ++QQ    T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK
               G+G K ++  ILDYL+ P C    +G H D IA+ + +P  KL   V++LE +GLIYST D+ HFK
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK

AT2G24490.2 replicon protein A27.7e-6747.99Show/hide
Query:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS EKS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN
        +WV+E  D+ E+E + DG YVR+ GHLK+F+GK  L VFS+RP+ D+NE+T H+IECI+ +  N++ ++QQ    T     T    SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTT--TQPTMPNLSNTPMKGYQAPIPN

Query:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK
               G+G K ++  ILDYL+ P C    +G H D IA+ + +P  KL   V++LE +GLIYST D+ HFK
Subjt:  QYPGQVGGDGWKTVEQKILDYLQLPTCD-NVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFK

AT3G02920.1 Replication protein A, subunit RPA325.5e-7351.07Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQAT     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTTTQPTMP-NLSNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK F+GKR++NVFS+RPVTD+NEI  HF EC+YVH YNTKLR       + T +P MP +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTTTQPTMP-NLSNTPMKGYQAP

Query:  IPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN
          NQ+P Q   D    V+Q +L+YL  P    +  G H D+IAR + +PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA322.2e-6947.67Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAK--------------------NRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRN
        MYG  FDGNAAF+GGGFMPSQAT     S S  K                    NRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +  
Subjt:  MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAK--------------------NRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK F+GKR++NVFS+RPVTD+NEI  HF EC+YVH YNTKLR       + T
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLR--KQQSSSTT

Query:  TQPTMP-NLSNTPMKGYQAPIPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN
         +P MP +   TP K YQ    NQ+P Q   D    V+Q +L+YL  P    +  G H D+IAR + +PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  TQPTMP-NLSNTPMKGYQAPIPNQYPGQVGGDGWKTVEQKILDYLQLPT-CDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGAAGTCAATTCGACGGCAACGCCGCCTTCTCCGGCGGTGGATTTATGCCGTCTCAGGCCACCCAGGCCCCCGATCATTCCTTCTCTCCGGCGAAAAATCGAGA
TGTCCAGGCATTGCTTCCATTAACAGTGAAGCAGATAAACGACGCATTCCTGTCTAGTGATGAAAAGTCAAATTTTGTTATTGACGGTGTTGATGTTAATAATGTTAAGC
TTGTAGGGATGGTGCGCAATCGAGCAGGAAGAATTACTGATGTGACTTTTGCATTGGATGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGAC
TCAAATGAAGTCGAGGGTATATTGGATGGTATGTACGTCAGGGTCCATGGCCACTTGAAAAGCTTCGAGGGTAAAAGAACTTTGAATGTCTTTTCCATCAGGCCTGTGAC
TGACTATAATGAGATCACAAGTCACTTCATCGAATGCATATACGTACATTTTTACAACACCAAGTTACGGAAACAACAAAGTAGCAGTACGACCACTCAGCCAACGATGC
CAAATTTATCTAATACGCCTATGAAAGGATATCAAGCTCCCATTCCAAATCAATACCCTGGCCAAGTAGGAGGTGATGGTTGGAAGACTGTTGAGCAGAAGATTTTAGAT
TATTTGCAACTTCCTACGTGCGACAATGTGAGGGGTGCACACCGTGATGTCATTGCTCGACATATTAACGTTCCACTGGAAAAGCTCATTCCAGCAGTGAAAAATCTAGA
AGAGGAAGGCCTGATCTACTCAACAACGGATGATCAGCACTTCAAGTCAACTGCCAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
CTCGATTATCGGAAAATTAAATAAAATAAGGGTTTGAAATGGCGGGAGAGAAGCTGAACTGGTATTTCTAGGGTTTAACAAAAGAAAATTTCATTTCGGAACTGTTCTTC
AATTCGCCCTCGATCAGTCACTTGATCTTCTCTCAAGGTTTGAATATTCTTCAGTTGTAGTGTTACGGTGTAAGAACGATGTACGGAAGTCAATTCGACGGCAACGCCGC
CTTCTCCGGCGGTGGATTTATGCCGTCTCAGGCCACCCAGGCCCCCGATCATTCCTTCTCTCCGGCGAAAAATCGAGATGTCCAGGCATTGCTTCCATTAACAGTGAAGC
AGATAAACGACGCATTCCTGTCTAGTGATGAAAAGTCAAATTTTGTTATTGACGGTGTTGATGTTAATAATGTTAAGCTTGTAGGGATGGTGCGCAATCGAGCAGGAAGA
ATTACTGATGTGACTTTTGCATTGGATGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGACTCAAATGAAGTCGAGGGTATATTGGATGGTAT
GTACGTCAGGGTCCATGGCCACTTGAAAAGCTTCGAGGGTAAAAGAACTTTGAATGTCTTTTCCATCAGGCCTGTGACTGACTATAATGAGATCACAAGTCACTTCATCG
AATGCATATACGTACATTTTTACAACACCAAGTTACGGAAACAACAAAGTAGCAGTACGACCACTCAGCCAACGATGCCAAATTTATCTAATACGCCTATGAAAGGATAT
CAAGCTCCCATTCCAAATCAATACCCTGGCCAAGTAGGAGGTGATGGTTGGAAGACTGTTGAGCAGAAGATTTTAGATTATTTGCAACTTCCTACGTGCGACAATGTGAG
GGGTGCACACCGTGATGTCATTGCTCGACATATTAACGTTCCACTGGAAAAGCTCATTCCAGCAGTGAAAAATCTAGAAGAGGAAGGCCTGATCTACTCAACAACGGATG
ATCAGCACTTCAAGTCAACTGCCAACGGTTGACGCCTCTGTTATGGAGATTTACTAATGATCCAAGGCAAGTTTACTAATACTTACCTGCCCTCCTTTCCTTTTCATCTA
TAAACACTCAGTATAATATTTCTAGTGAAAAAAACATTATCCGTACAAATCCTATTATGTAGTTTGCCTGTGAACGAAAAAGATTAAACGAAAACTTAAGGCCAGACGGC
CATGGCTTGTTGAATCTACTTTTTTCGTTGTTTCATATATATGTGATTGTCTGTGCCAGCGCGTAACCCTATTCGGTTGTTCTTATTGTAATGATCGCCTAACGTATAAC
ATTTGGTTTTCAAAAATATTTGTATGTAGGTGGTCATCACACCATGAATTGAATGCATCACCTTTTAAATTTTGATTACTAA
Protein sequenceShow/hide protein sequence
MYGSQFDGNAAFSGGGFMPSQATQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDEKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAAD
SNEVEGILDGMYVRVHGHLKSFEGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTKLRKQQSSSTTTQPTMPNLSNTPMKGYQAPIPNQYPGQVGGDGWKTVEQKILD
YLQLPTCDNVRGAHRDVIARHINVPLEKLIPAVKNLEEEGLIYSTTDDQHFKSTANG