; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008392 (gene) of Chayote v1 genome

Gene IDSed0008392
OrganismSechium edule (Chayote v1)
DescriptionrRNA-processing protein like
Genome locationLG09:36246527..36258901
RNA-Seq ExpressionSed0008392
SyntenySed0008392
Gene Ontology termsNA
InterPro domainsIPR013730 - Fyv7/TAP26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]5.0e-7584.9Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE 
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
          ENQTN R GNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS++H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
XP_004136058.2 uncharacterized protein LOC101216293 [Cucumis sativus]1.5e-7484.38Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MK+  GK E  NR KSKFM NNN   N+KRLGGKGLSLEAFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQNQPNERPSSS V LVE ENET
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K ENQTN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS +H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]3.8e-7584.9Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE 
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K EN+TN R GNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS++H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
XP_023513566.1 uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo]3.2e-7484.38Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKNR GKDE+Q   KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQN  NERPSSS +GLVE ENE 
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K ENQTN R GNERNKGVPSLQGLYERKHQEKEKAR EKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGASV+H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
XP_038876713.1 uncharacterized protein LOC120069103 [Benincasa hispida]1.0e-7586.01Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKN TGKDEDQNR  SKFMK+  + KNMKRLGGKGLSLEAFANAKST+DYYNPALI+KQREFYKNAKHVSKYKK VK+QNQ NERPSSS VGLVEDENET
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETI-GASVHH
        K EN TN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKMFKRT+KGQPVMKYRIEHLLETI GAS+ H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETI-GASVHH
TrEMBL top hitse value%identityAlignment
A0A0A0K7L3 Uncharacterized protein7.1e-7584.38Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MK+  GK E  NR KSKFM NNN   N+KRLGGKGLSLEAFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQNQPNERPSSS V LVE ENET
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K ENQTN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS +H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
A0A1S3BRH3 uncharacterized protein LOC1034927334.6e-7483.85Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKN  GK E +NR KSKFM N N   N+KRLGGK LSLEAFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQNQ NERPSSS VGLVE ENET
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K ENQTN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS +H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
A0A6J1GP14 uncharacterized protein LOC1114558277.8e-7483.77Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MK RTG+DE QNRPKS FMKN  + KNMKRLGGKGLSLEAFAN KST+DYYNPALI+KQREFYKNAKHVSKYKK VKHQN  NERPSSS VGLVE EN T
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVH
        K ENQTN R G ERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRT+KGQPVMKYRIEHLL+TIGAS++
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVH
A0A6J1H9B9 uncharacterized protein LOC1114612411.9e-7584.9Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQREFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE 
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K EN+TN R GNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS++H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
A0A6J1KV89 uncharacterized protein LOC1114978952.1e-7483.33Show/hide
Query:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET
        MKNR GKDE+Q R KSKF K N + KNMKRLGGKG S +AFANAKST+DYYNPA I+KQREFYKNAKHV+KYKK VKHQN  NERPS+S VGLVE ENE 
Subjt:  MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENET

Query:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
        K EN+TN R GNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIEHLLETIGAS++H
Subjt:  KSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).3.3e-3245.36Show/hide
Query:  KDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQT
        ++ D    KSK       RKNM+RLGG GLSL+ FAN KS ++ YNP+LI+KQ+EFYKNAK+VSK++K +K QN P++  +     + +D+++ K + ++
Subjt:  KDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQT

Query:  NRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGAS
        N+R G         ++ LY++  +E E+ R E+EA+  AKKE +E+A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  NRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACCGAACCGGAAAAGACGAAGATCAGAATCGGCCGAAATCGAAGTTCATGAAGAACAACAATAATCGCAAGAACATGAAACGATTGGGAGGGAAGGGCCTTTC
GCTCGAGGCGTTTGCGAATGCGAAATCGACTTCCGATTACTATAATCCGGCTTTGATACAAAAGCAGAGAGAGTTCTATAAGAATGCTAAACATGTAAGCAAGTATAAGA
AGTTTGTGAAGCATCAGAATCAGCCAAATGAAAGACCCTCTAGCTCAGTTGTTGGACTTGTTGAGGATGAAAATGAAACAAAATCCGAGAACCAGACGAACCGAAGACAT
GGGAATGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTACGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAGAA
GGAAGAACAAGAAAAGGCCAAAGCTAGACGAAACTCGACGAGGGAAAAAATGTTCAAAAGGACTAAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGG
AAACCATTGGAGCCTCCGTGCACCACTGA
mRNA sequenceShow/hide mRNA sequence
GTTTTGCCCTAATTGTTCTAAACTTCAATCTCTCTGCAAAATTTTCTCTTCAACGATGAAGAACCGAACCGGAAAAGACGAAGATCAGAATCGGCCGAAATCGAAGTTCA
TGAAGAACAACAATAATCGCAAGAACATGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTTGCGAATGCGAAATCGACTTCCGATTACTATAATCCGGCTTTG
ATACAAAAGCAGAGAGAGTTCTATAAGAATGCTAAACATGTAAGCAAGTATAAGAAGTTTGTGAAGCATCAGAATCAGCCAAATGAAAGACCCTCTAGCTCAGTTGTTGG
ACTTGTTGAGGATGAAAATGAAACAAAATCCGAGAACCAGACGAACCGAAGACATGGGAATGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTACGAGAGAAAGC
ATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAGAAGGAAGAACAAGAAAAGGCCAAAGCTAGACGAAACTCGACGAGGGAAAAAATGTTC
AAAAGGACTAAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAAACCATTGGAGCCTCCGTGCACCACTGAGGCTTTTGTTGTTTTGACTGAAACTT
TGTGAAAGAAAATTTTGGCGCTTGTATAATATTAATATATATCTTTGTACTTTTTAGTTTGCTTCTCTCTGTACAATCAAATTTGAATGTAGTAAAATAATCTTAAATGA
TATATATGCTTGATATTGACTTTTTGCCGC
Protein sequenceShow/hide protein sequence
MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRH
GNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH