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Sed0008397 (gene) of Chayote v1 genome

Gene IDSed0008397
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:17671693..17672199
RNA-Seq ExpressionSed0008397
SyntenySed0008397
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]1.3e-0648.35Show/hide
Query:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR---DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
        R SS LLI+ L+AA RF L VDCRP++ GS     H+ +  + L      ET        DSG    G++  GGGVAFT+ASGPSRKG GH
Subjt:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR---DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1362.07Show/hide
Query:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGST-ERHLINGPAGLAEKPESETPLPTRDSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
        +SSSLLLI+ L+AAT F LLVD RP++SGST + H IN  + LAEKPE+    PT DS   +SG  G GGGV FTL SGPSRKG GH
Subjt:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGST-ERHLINGPAGLAEKPESETPLPTRDSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1057.95Show/hide
Query:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGSTERH--LINGPAGLAEKPESETPLPTRDSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
        ++SSLLLIM+LMAATRF  LVDCRP++SGST  H    NG A  + +  + +P    DSG   SG+    GGVAFTLASGPSRKG GH
Subjt:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGSTERH--LINGPAGLAEKPESETPLPTRDSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]1.7e-0955.06Show/hide
Query:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR-DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
        R SS LLI+LLMAA RF L VDCRP++ GS     H+ N  A   + PE++       DSGG R G++  GGGVAFT+ASGPSRKG GH
Subjt:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR-DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein8.1e-1055.06Show/hide
Query:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR-DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
        R SS LLI+LLMAA RF L VDCRP++ GS     H+ N  A   + PE++       DSGG R G++  GGGVAFT+ASGPSRKG GH
Subjt:  RSSSLLLIMLLMAATRFDLLVDCRPIQSGS--TERHLINGPAGLAEKPESETPLPTR-DSGGGRSGEDGSGGGVAFTLASGPSRKGPGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGAGCTCATCTTTACTTCTGATCATGCTTCTAATGGCCGCCACGCGGTTCGATCTTCTCGTGGACTGCAGACCGATCCAGTCCGGTTCGACAGAGCGCCACCT
TATCAATGGCCCTGCTGGTCTTGCCGAGAAGCCGGAATCAGAAACACCATTGCCAACGAGAGACTCCGGTGGCGGTCGGAGTGGAGAAGATGGAAGCGGCGGGGGCGTAG
CGTTTACGTTGGCTTCGGGACCGAGCAGAAAGGGTCCTGGACATTAA
mRNA sequenceShow/hide mRNA sequence
GAGATGCCAAACCAAATCCTCCATTCTTTTTCCTCTCGCCGAATCTAAATTCCCCGGCGAGTCGCCGACATGAGGAGGAGCTCATCTTTACTTCTGATCATGCTTCTAAT
GGCCGCCACGCGGTTCGATCTTCTCGTGGACTGCAGACCGATCCAGTCCGGTTCGACAGAGCGCCACCTTATCAATGGCCCTGCTGGTCTTGCCGAGAAGCCGGAATCAG
AAACACCATTGCCAACGAGAGACTCCGGTGGCGGTCGGAGTGGAGAAGATGGAAGCGGCGGGGGCGTAGCGTTTACGTTGGCTTCGGGACCGAGCAGAAAGGGTCCTGGA
CATTAAACCAAACATGAAGCATATTCTTTGCCCATTTTGTATTGCTAAATCTTGGCTTTACGTTTTTGGGTTATGTACATGCCAATTTTCTTTATTGTAGATATATTTTT
TTTAATCGAGTCTGAAATTTTTAGTTTCAGAACTTTCCAAATGTATATTTTAATTCTAGCTTCACAG
Protein sequenceShow/hide protein sequence
MRRSSSLLLIMLLMAATRFDLLVDCRPIQSGSTERHLINGPAGLAEKPESETPLPTRDSGGGRSGEDGSGGGVAFTLASGPSRKGPGH