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Sed0008410 (gene) of Chayote v1 genome

Gene IDSed0008410
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:22838461..22838934
RNA-Seq ExpressionSed0008410
SyntenySed0008410
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052718.1 hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]9.0e-1173.08Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M   R+D I+GA YS R S RPIPKRGQVKLGIMVGLAH+VA IFSPT RR+
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

KAG2689810.1 hypothetical protein I3760_09G156900 [Carya illinoinensis]9.3e-0870.21Show/hide
Query:  SRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR
        +R+  I+G ++S R SGRPIPKRGQVKLGI+VGLAHSVA IFSP  R
Subjt:  SRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR

KAG6642713.1 hypothetical protein CIPAW_09G159600 [Carya illinoinensis]4.6e-0768.09Show/hide
Query:  SRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR
        +R+  I+G ++S   SGRPIPKRGQVKLGI+VGLAHSVA IFSP  R
Subjt:  SRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR

KGN49191.1 hypothetical protein Csa_004352 [Cucumis sativus]2.2e-0969.23Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M +SR   I+ A YS R S RP PKRGQVKLGIMVGLAH+VA IFSPT RR+
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

XP_022977341.1 uncharacterized protein LOC111477692 [Cucurbita maxima]1.1e-1386Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR
        MG SR+D ISGATYS R SGRPIPKRGQVKLGIMVGLAHSVA IFSPT R
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR

TrEMBL top hitse value%identityAlignment
A0A0A0KN78 Uncharacterized protein1.1e-0969.23Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M +SR   I+ A YS R S RP PKRGQVKLGIMVGLAH+VA IFSPT RR+
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

A0A5A7UBX7 Uncharacterized protein4.3e-1173.08Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M   R+D I+GA YS R S RPIPKRGQVKLGIMVGLAH+VA IFSPT RR+
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

A0A6J1IJM3 uncharacterized protein LOC1114776925.5e-1486Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR
        MG SR+D ISGATYS R SGRPIPKRGQVKLGIMVGLAHSVA IFSPT R
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTAR

F6GYY0 Uncharacterized protein5.9e-0865.38Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M   R   I+G  +S+R SGRPIPKRGQVK+GI+VGLAHSVA IFS   RRS
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

F6GYY1 Uncharacterized protein2.9e-0761.54Show/hide
Query:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS
        M   R D I+G ++S+R SGRPIPKRGQVK+ I VG AHSVA IFS   RR+
Subjt:  MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTTCCAGAAACGACGGCATCAGTGGCGCCACGTACTCTCGGAGGAAATCTGGCCGTCCGATTCCGAAGAGAGGACAAGTCAAATTGGGGATTATGGTGGGTCT
GGCTCATTCTGTTGCTATGATTTTCTCCCCCACCGCCCGTCGGTCCTAG
mRNA sequenceShow/hide mRNA sequence
CCATAATCAATCTGAAAGCATTAGAAATGGGCAGTTCCAGAAACGACGGCATCAGTGGCGCCACGTACTCTCGGAGGAAATCTGGCCGTCCGATTCCGAAGAGAGGACAA
GTCAAATTGGGGATTATGGTGGGTCTGGCTCATTCTGTTGCTATGATTTTCTCCCCCACCGCCCGTCGGTCCTAGAAACCAAACCCGAGCGGCCCGGCCCGATCCAACCC
GACCCATTTTCTTTGATCTTTTTGAAAGTTAAATGTTGCTGTGGAAATGTGGATTTGGAGACAAAGGGCATGGAGAGCTGTTTTCTTTTTTTTCTTTTTTTTTTTGGTTT
ATGTGGTAAATAGTGATTTTTTAAAAAAAAATTGATGGGAAATTAAGATTTTGTTATCTATTTATGATTCTCATATTTGAAGATTTTTATTGTATTTTAGGTAATGGGAA
TGAGTATATGGAGAAATTTTATACATGGGAATGG
Protein sequenceShow/hide protein sequence
MGSSRNDGISGATYSRRKSGRPIPKRGQVKLGIMVGLAHSVAMIFSPTARRS