; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008432 (gene) of Chayote v1 genome

Gene IDSed0008432
OrganismSechium edule (Chayote v1)
DescriptionDNA-binding protein S1FA-like
Genome locationLG14:4374573..4377336
RNA-Seq ExpressionSed0008432
SyntenySed0008432
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]1.4e-2487.5Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        GNVIRD +AR GFNPG+IVLLV+GGLL AFLVGNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QG+SAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

XP_008449267.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]7.2e-2487.32Show/hide
Query:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        NVIRD +AR GFNPG+IVLLV+GGLL AFLVGNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QG+SAPGE
Subjt:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

XP_022143745.1 DNA-binding protein S1FA-like [Momordica charantia]8.5e-2588.89Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G VIRDADA GGFNPG++VLLV+GGLLLAFLVGNYALY+YA+KTLPPKKKKPVSKKKMKRERL+QGISAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]2.5e-2487.5Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        GNVIR+ADAR GFNPG+IVLLV+GGLLLAFL GNYALY+YA+KTLPPK+KKPVSKKKMKRERL+QGISAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]1.3e-2591.67Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        GNVIRDADAR GFNPG+IVLLV+GGLLLAFL GNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QGISAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

TrEMBL top hitse value%identityAlignment
A0A0A0KEM3 DNA-binding protein S1FA7.0e-2587.5Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        GNVIRD +AR GFNPG+IVLLV+GGLL AFLVGNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QG+SAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

A0A1S3BLN5 DNA-binding protein S1FA-like3.5e-2487.32Show/hide
Query:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        NVIRD +AR GFNPG+IVLLV+GGLL AFLVGNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QG+SAPGE
Subjt:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

A0A5A7TZ88 DNA-binding protein S1FA-like3.5e-2487.32Show/hide
Query:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        NVIRD +AR GFNPG+IVLLV+GGLL AFLVGNYALYMYA+KTLPPKKKKPVSKKKMKRERL+QG+SAPGE
Subjt:  NVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

A0A6J1CPM9 DNA-binding protein S1FA-like4.1e-2588.89Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G VIRDADA GGFNPG++VLLV+GGLLLAFLVGNYALY+YA+KTLPPKKKKPVSKKKMKRERL+QGISAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

A0A6J1HDT2 DNA-binding protein S1FA-like1.2e-2487.5Show/hide
Query:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        GNVIR+ADAR GFNPG+IVLLV+GGLLLAFL GNYALY+YA+KTLPPK+KKPVSKKKMKRERL+QGISAPGE
Subjt:  GNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

SwissProt top hitse value%identityAlignment
P42552 DNA-binding protein S1FA3.8e-2071.01Show/hide
Query:  IRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        + + +A+ G NPG+IVLLVIGGLLL FLVGN+ LY YA+K LPPKKKKP+SKKKMKRERL+QG++ PGE
Subjt:  IRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

P42553 DNA-binding protein S1FA11.1e-1967.12Show/hide
Query:  QGNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        Q N +   +   G NPG IVLLV+  LL+ F VGNYALYMYA+KTLPP+KKKPVSKKK+KRE+L+QG+SAPGE
Subjt:  QGNVIRDADARGGFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

P42554 DNA-binding protein S1FA (Fragment)1.6e-1873.77Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPGM+V LV+   LL F VGNYALY YA+KTLPPKKKKPVSKKK+K+E+L+QG+SAPGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

Q7XLX6 DNA-binding protein S1FA22.5e-1977.05Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPGMIVL+V+   LL F VGNYALY+YA+KTLPP+KKKPVSKKKMKRE+L+QG+SAPGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

Q93VI0 DNA-binding protein S1FA31.2e-1873.77Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPG+IVLLVIGGLLL FLVGN+ LY YA+K LPP+KKKPVSKKKMK+E+++QG+  PGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein2.0e-1970.49Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPG+IVLLVIGGLL+ FL+ NY +YMYA+K LPP+KKKP+SKKK+KRE+L+QG+  PGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

AT3G09735.1 S1FA-like DNA-binding protein8.8e-2073.77Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPG+IVLLVIGGLLL FLVGN+ LY YA+K LPP+KKKPVSKKKMK+E+++QG+  PGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

AT3G53370.1 S1FA-like DNA-binding protein5.7e-1970.49Show/hide
Query:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        G NPG+IVLLV+GG LL FL+ NY LY+YA+K LPP+KKKPVSKKK+KRE+L+QG+  PGE
Subjt:  GFNPGMIVLLVIGGLLLAFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE

AT3G53370.2 S1FA-like DNA-binding protein1.1e-0669.7Show/hide
Query:  YARKTLPPKKKKPVSKKKMKRERLRQGISAPGE
        +A K LPP+KKKPVSKKK+KRE+L+QG+  PGE
Subjt:  YARKTLPPKKKKPVSKKKMKRERLRQGISAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAAATCAAGAATCCGCCATTTTCATATCTCCACTTTTTTGTATTTTTCTCAAAGCTTCTGCCCTTCATCTTTGTCGCACTTAAACTGCACACAGCAGCAGCTCG
TTTCAAACGCCATTTCTCAGCTTCAGAGTTTCCGCCATGGAAGACGAATTCGATTTCGGCGACAAGGGATCTGCTTCATGAGTACGCTTTTAGACTGTTTTCGGTTAATG
AAACAATAGAATTGGGGTTGTTGCAGGGGAACGTGATCAGGGATGCAGATGCAAGAGGAGGGTTCAATCCAGGAATGATTGTGCTGCTCGTAATCGGGGGGCTGCTACTG
GCTTTTCTCGTCGGGAATTACGCGCTGTACATGTATGCGCGGAAGACACTTCCTCCTAAAAAGAAGAAACCAGTTTCGAAGAAGAAGATGAAGAGGGAGAGATTGAGGCA
AGGTATCTCAGCTCCTGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAAAATCAAGAATCCGCCATTTTCATATCTCCACTTTTTTGTATTTTTCTCAAAGCTTCTGCCCTTCATCTTTGTCGCACTTAAACTGCACACAGCAGCAGCTCG
TTTCAAACGCCATTTCTCAGCTTCAGAGTTTCCGCCATGGAAGACGAATTCGATTTCGGCGACAAGGGATCTGCTTCATGAGTACGCTTTTAGACTGTTTTCGGTTAATG
AAACAATAGAATTGGGGTTGTTGCAGGGGAACGTGATCAGGGATGCAGATGCAAGAGGAGGGTTCAATCCAGGAATGATTGTGCTGCTCGTAATCGGGGGGCTGCTACTG
GCTTTTCTCGTCGGGAATTACGCGCTGTACATGTATGCGCGGAAGACACTTCCTCCTAAAAAGAAGAAACCAGTTTCGAAGAAGAAGATGAAGAGGGAGAGATTGAGGCA
AGGTATCTCAGCTCCTGGAGAGTAG
Protein sequenceShow/hide protein sequence
MTKIKNPPFSYLHFFVFFSKLLPFIFVALKLHTAAARFKRHFSASEFPPWKTNSISATRDLLHEYAFRLFSVNETIELGLLQGNVIRDADARGGFNPGMIVLLVIGGLLL
AFLVGNYALYMYARKTLPPKKKKPVSKKKMKRERLRQGISAPGE