; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008440 (gene) of Chayote v1 genome

Gene IDSed0008440
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationLG05:44229103..44231762
RNA-Seq ExpressionSed0008440
SyntenySed0008440
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571065.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3070.83Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF LAR+   VQN+ LSSLT H+KSS IRKGYCAVY GES+KKRFVIP+ YLNEP  KDLLS+V EEFGYNHPMG LTIPC +D F  + SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

KAG6605034.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3071.88Show/hide
Query:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L +MV   QNLRLSSLT HH SS IRKGYCAVY G+SQKKRF+IPVAYLNEP  KDLL+QVEEEFGY+HPMG LTIPC +  F  + SRL +
Subjt:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

KGN61865.1 hypothetical protein Csa_006212 [Cucumis sativus]5.7e-3273.96Show/hide
Query:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L RMV   QN+RLSSLT HH SS IRKGYCAVY GE+QKKRFVIP+AYLNEP  KDLLSQV EEFGYNHPMG LTIPC  D F ++ SRL +
Subjt:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.3e-3273.96Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L RM   VQN+RLSSLT HH SS IRKGYCAVY GESQKKRFVIP+AYLN+P  KDLLSQV EEFGYNHPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]6.0e-3478.12Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+LARM   VQN+RLSSLT HH SS IRKGYCAVY GESQKKRFVIPVAYLNEP  KDLLSQVEEEFGYNHPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein2.7e-3273.96Show/hide
Query:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L RMV   QN+RLSSLT HH SS IRKGYCAVY GE+QKKRFVIP+AYLNEP  KDLLSQV EEFGYNHPMG LTIPC  D F ++ SRL +
Subjt:  MGFQLARMV---QNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

A0A1S3C683 auxin-responsive protein SAUR21-like1.6e-3273.96Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L RM   VQN+RLSSLT HH SS IRKGYCAVY GESQKKRFVIP+AYLN+P  KDLLSQV EEFGYNHPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

A0A5D3BN78 Auxin-responsive protein SAUR21-like1.6e-3273.96Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L RM   VQN+RLSSLT HH SS IRKGYCAVY GESQKKRFVIP+AYLN+P  KDLLSQV EEFGYNHPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

A0A6J1CXQ4 auxin-responsive protein SAUR24-like4.4e-3068.75Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+L R+   VQ+L+LSSLT +H SS +R+GYCAVY GESQKKRFVIPVAYLNEP  +DLLSQ EEE+GYNHPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

A0A6J1CYP6 auxin-responsive protein SAUR21-like2.9e-2664.58Show/hide
Query:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF+LA++   VQNL LSSLT  H SSTIRKG  A+Y GES++ RFVIP+AYL+ P  KDLLSQ EEEFGY+HPMG LTIPC +D F ++ SRL +
Subjt:  MGFQLARM---VQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A51.2e-2152.69Show/hide
Query:  MGFQLARMVQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ
        MGF++A +V+     +  A  K   + KGY AVY G+ + +RF IPV+YLNEP  ++LLSQ EEEFGY+HPMG LTIPCKE+ F  VT+ L +
Subjt:  MGFQLARMVQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ

P33080 Auxin-induced protein X10A2.3e-2053.85Show/hide
Query:  MGFQLARMVQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        MGF+L   ++   +++  A  KS  + KGY  VY G+ + +RF+IPV+YLN+P  +DLL+Q EEEFGY+HPMG LTIPCKED F  VTS L
Subjt:  MGFQLARMVQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

Q9FJF6 Auxin-responsive protein SAUR231.2e-1965.62Show/hide
Query:  KGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        KG+ AVY GESQKKR+++P++YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSRL
Subjt:  KGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

Q9FJG0 Auxin-responsive protein SAUR201.2e-1961.76Show/hide
Query:  SSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSR
        +S   KG+ AVY GESQKKR+++P++YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSR
Subjt:  SSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSR

Q9FK62 Auxin-responsive protein SAUR244.0e-2064.71Show/hide
Query:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        S   KG+ AVY GESQKKR+++PV+YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSRL
Subjt:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family8.2e-2161.76Show/hide
Query:  SSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSR
        +S   KG+ AVY GESQKKR+++P++YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSR
Subjt:  SSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSR

AT5G18030.1 SAUR-like auxin-responsive protein family1.8e-2053.75Show/hide
Query:  LRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        L    + +   +S   KG+ AVY GESQKKR+++P++YL++P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSRL
Subjt:  LRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family1.4e-2061.76Show/hide
Query:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        S   KG+ AVY GESQKKR+++P++YLN+P  + LLS+ E+EFG++HPMG LTIPC ED F  VTSRL
Subjt:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

AT5G18060.1 SAUR-like auxin-responsive protein family8.2e-2165.62Show/hide
Query:  KGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        KG+ AVY GESQKKR+++P++YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSRL
Subjt:  KGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family2.8e-2164.71Show/hide
Query:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL
        S   KG+ AVY GESQKKR+++PV+YLN+P  + LLS+ EEEFG++HPMG LTIPC ED F  VTSRL
Subjt:  STIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCAATTGGCAAGAATGGTGCAAAATCTTAGACTTTCTTCTCTAACAGCACACCACAAATCTTCGACAATCCGCAAAGGTTATTGTGCAGTTTATGCAGGGGA
AAGCCAAAAGAAGCGATTTGTGATTCCAGTAGCTTACTTGAATGAGCCATGTTCCAAGGACCTGCTGAGTCAAGTTGAAGAAGAATTTGGTTACAATCATCCTATGGGAT
GCCTCACTATTCCTTGCAAAGAAGATAATTTCTTTGAAGTTACTTCTAGGCTTGGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCAATTGGCAAGAATGGTGCAAAATCTTAGACTTTCTTCTCTAACAGCACACCACAAATCTTCGACAATCCGCAAAGGTTATTGTGCAGTTTATGCAGGGGA
AAGCCAAAAGAAGCGATTTGTGATTCCAGTAGCTTACTTGAATGAGCCATGTTCCAAGGACCTGCTGAGTCAAGTTGAAGAAGAATTTGGTTACAATCATCCTATGGGAT
GCCTCACTATTCCTTGCAAAGAAGATAATTTCTTTGAAGTTACTTCTAGGCTTGGGCAGTAG
Protein sequenceShow/hide protein sequence
MGFQLARMVQNLRLSSLTAHHKSSTIRKGYCAVYAGESQKKRFVIPVAYLNEPCSKDLLSQVEEEFGYNHPMGCLTIPCKEDNFFEVTSRLGQ