CuGenDBv2

Gene ID	Sed0008460
Organism	Sechium edule (Chayote v1)
Description	Protein Ycf2-like
Genome location	LG06:32909466..32911112
RNA-Seq Expression	Sed0008460
Synteny	Sed0008460
Gene Ontology terms	NA
InterPro domains	IPR015410 - Domain of unknown function DUF1985

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]

7.5e-33

35.28

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Query:  QRPQRRRISERLRSAGVLSRA-IKKKQASSIEVSSTE------SKSASAETEIHSDDDDHETNSD--RESTEKSMC-PPTKKPLAKADKTKTKHDSKPKG
        +R   R   +R+R+      A ++KKQ     VS          K    E +I   +D + + S+   ++ ++S      KK  A   + K + D + KG
Subjt:  QRPQRRRISERLRSAGVLSRA-IKKKQASSIEVSSTE------SKSASAETEIHSDDDDHETNSD--RESTEKSMC-PPTKKPLAKADKTKTKHDSKPKG

Query:  KGLRGEKVKPIEASDDLDLDDDYVMTAYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFK
        K      + P ++ D +     Y+M +  R+  +KINL  +S V+  I++NLGD LI +F+   FGH L+      SSQLLL++IQR C P+   +L F 
Subjt:  KGLRGEKVKPIEASDDLDLDDDYVMTAYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFK

Query:  IGGKLLTFGLREFALITGLNCGPLVKIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMID
        IGG++L FGLREFALITGL C  +  I+   I     L+  YFE  + + R  LN+ F ++    +DD +KM+ LY LESFL+ KQ+  +VD +H++M+D
Subjt:  IGGKLLTFGLREFALITGLNCGPLVKIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMID

Query:  DLDLFNNYP
        D ++F+ YP
Subjt:  DLDLFNNYP

TYK12922.1 uncharacterized protein E5676_scaffold255G005170 [Cucumis melo var. makuwa]

1.2e-27

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

XP_008440207.1 PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo]

1.2e-27

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

XP_008440212.1 PREDICTED: uncharacterized protein LOC103484737 isoform X5 [Cucumis melo]

1.2e-27

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

XP_016899363.1 PREDICTED: uncharacterized protein LOC103484737 isoform X3 [Cucumis melo]

1.2e-27

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B065 uncharacterized protein LOC103484737 isoform X4

6.0e-28

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X5

6.0e-28

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

A0A1S3B181 uncharacterized protein LOC103484737 isoform X7

6.0e-28

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

A0A5A7U047 Protein Ycf2-like

3.6e-33

35.28

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Query:  QRPQRRRISERLRSAGVLSRA-IKKKQASSIEVSSTE------SKSASAETEIHSDDDDHETNSD--RESTEKSMC-PPTKKPLAKADKTKTKHDSKPKG
        +R   R   +R+R+      A ++KKQ     VS          K    E +I   +D + + S+   ++ ++S      KK  A   + K + D + KG
Subjt:  QRPQRRRISERLRSAGVLSRA-IKKKQASSIEVSSTE------SKSASAETEIHSDDDDHETNSD--RESTEKSMC-PPTKKPLAKADKTKTKHDSKPKG

Query:  KGLRGEKVKPIEASDDLDLDDDYVMTAYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFK
        K      + P ++ D +     Y+M +  R+  +KINL  +S V+  I++NLGD LI +F+   FGH L+      SSQLLL++IQR C P+   +L F 
Subjt:  KGLRGEKVKPIEASDDLDLDDDYVMTAYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFK

Query:  IGGKLLTFGLREFALITGLNCGPLVKIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMID
        IGG++L FGLREFALITGL C  +  I+   I     L+  YFE  + + R  LN+ F ++    +DD +KM+ LY LESFL+ KQ+  +VD +H++M+D
Subjt:  IGGKLLTFGLREFALITGLNCGPLVKIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMID

Query:  DLDLFNNYP
        D ++F+ YP
Subjt:  DLDLFNNYP

A0A5D3CNI7 TF-B3 domain-containing protein

6.0e-28

31.1

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Query:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT
        +K+  +S++ +  + K  SA +E+   +++       + + + +    KK +A+  K +  H  K K +G +G K      P E  D++D+  +Y  ++ 
Subjt:  KKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEK----VKPIEASDDLDLDDDY--VMT

Query:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
            S   +INL  +  V++ I+  L +  ++KFK + FG+ L     + SSQL  ++I+RQC  +   EL F + G++  FG+++FALITGLNCG L  
Subjt:  AYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK

Query:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP
        ID + I+  +   K YF  ++ I+R+ L+  F    +    D++KM+ LY LE F+L KQ +  ++ E+ L+IDD + F++YP
Subjt:  IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G31150.1 Domain of unknown function (DUF1985)

9.5e-10

27.41

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Query:  CRSRAIKINLCCRSGVMAAIQKNL-GDHLIEKFKNTYFGHLLHFLAKRA--SSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLV
        C     ++N+  R   +  I   L G    E+ K++ FG L  F   R   S +L+  ++ RQ   +K  EL F  GG  + F +REF ++TGL CG L 
Subjt:  CRSRAIKINLCCRSGVMAAIQKNL-GDHLIEKFKNTYFGHLLHFLAKRA--SSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLV

Query:  KIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESF-------------LLAKQDKVAVDDEHLLMIDDLDLFNNYP
          D       +H    Y         SV N  F   R     D+L+M     L S+             ++   D+  V  + + M++D+D F  YP
Subjt:  KIDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESF-------------LLAKQDKVAVDDEHLLMIDDLDLFNNYP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAAAAAACCCAAAGACCCCAAAGACGAAGAATCAGTGAGCGTTTGAGATCTGCCGGAGTTTTATCGAGGGCAATCAAGAAGAAACAAGCTTCATCGATCGAAGTGTC
GAGTACTGAATCCAAAAGTGCTTCTGCGGAGACCGAAATTCATTCTGATGATGATGACCATGAGACCAACTCGGATAGAGAATCCACAGAGAAGAGCATGTGCCCTCCTA
CAAAGAAACCACTTGCTAAAGCCGATAAAACAAAGACGAAACATGACAGCAAACCAAAGGGGAAAGGACTAAGGGGAGAAAAGGTCAAACCTATTGAAGCATCGGATGAC
CTTGATCTGGATGATGACTATGTTATGACAGCCTACTGTAGATCAAGAGCAATCAAGATTAACTTGTGCTGCCGGAGTGGTGTAATGGCAGCTATTCAAAAGAACTTGGG
GGATCATCTCATAGAGAAGTTTAAAAACACCTACTTTGGGCACCTACTACATTTCTTGGCTAAACGAGCGTCATCCCAACTGTTGTTGAACATAATACAACGACAATGTG
ACCCTCAGAAGTACCCAGAGTTGACATTTAAGATTGGTGGAAAATTGTTGACTTTCGGGCTACGAGAGTTTGCACTTATTACAGGGCTAAACTGTGGGCCCTTGGTGAAA
ATAGATACAACAACAATCAAGGATGTGGAGCATCTCCGAAAAGACTACTTCGAAGAGGATGAGGTGATCAAAAGGTCTGTATTGAACATGGCTTTTAGGGTCAATAGGCG
AGCTCCTGAGGACGACATGTTGAAGATGTCTTTGTTGTACTGCCTTGAGAGTTTCTTATTAGCAAAACAAGACAAGGTTGCAGTCGACGATGAACACCTACTAATGATTG
ATGACCTCGACTTGTTCAATAATTACCCATGA

mRNA sequence

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Protein sequence

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MKKTQRPQRRRISERLRSAGVLSRAIKKKQASSIEVSSTESKSASAETEIHSDDDDHETNSDRESTEKSMCPPTKKPLAKADKTKTKHDSKPKGKGLRGEKVKPIEASDD
LDLDDDYVMTAYCRSRAIKINLCCRSGVMAAIQKNLGDHLIEKFKNTYFGHLLHFLAKRASSQLLLNIIQRQCDPQKYPELTFKIGGKLLTFGLREFALITGLNCGPLVK
IDTTTIKDVEHLRKDYFEEDEVIKRSVLNMAFRVNRRAPEDDMLKMSLLYCLESFLLAKQDKVAVDDEHLLMIDDLDLFNNYP

Sed0008460 (gene) of Chayote v1 genome