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Sed0008482 (gene) of Chayote v1 genome

Gene IDSed0008482
OrganismSechium edule (Chayote v1)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationLG07:3263607..3265917
RNA-Seq ExpressionSed0008482
SyntenySed0008482
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]7.5e-8195.45Show/hide
Query:  MPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGRETRE
        MPWSDEEDNSSSKESSLSQSDSDADED G+AKA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTGRETRE
Subjt:  MPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGRETRE

Query:  NRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        NR+TEESYEERQKTRAALENGEQLLTALT+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  NRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]3.8e-7790.61Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADED GE KASFRVKA GRSSKEKDT+VKS KRKS AVDF+ LKRHGYKGGPS+L VPPPKENEKQDWSWS G
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG

Query:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        +ETRENR TEESYEERQKTRAALENGEQLLTA TRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]4.7e-8395.56Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADED G+AKA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR

Query:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        ETRENR+TEESYEERQKTRAALENGEQLLTALT+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]2.7e-8396.11Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADED G+AKA FRVKAGRSSKEK TEVKSGKRKSIAVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR

Query:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        ETRENR TEESYEERQKTRAALENGEQLLTALT+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_038896833.1 UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]1.6e-7587.83Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSDADED GE KASFRVKAGRSSKEKD EVKS GKRKS+AVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG

Query:  RETRENRNTEESYEERQKTRAALENGEQLLTALTR--------KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        RETRENR TEESYEERQKTRAALENGEQLLTA TR        KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRNTEESYEERQKTRAALENGEQLLTALTR--------KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein6.6e-7585.86Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG
        MKRAMPWSDEEDNS    SSLSQSDSD DED GE KASFRVK GRSSKEKDTEVKS GKRKS+AVDFDTL+RHGY+GGPS+LKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG

Query:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        RETRENR TEESYEERQKTRAALENGEQLLTA TRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A5D3DRL7 UPF0690 protein C1orf52-like protein6.6e-7585.86Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG
        MKRAMPWSDEEDNS    SSLSQSDSD DED GE KASFRVK GRSSKEKDTEVKS GKRKS+AVDFDTL+RHGY+GGPS+LKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG

Query:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        RETRENR TEESYEERQKTRAALENGEQLLTA TRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1DAL0 UPF0690 protein C1orf52 homolog1.9e-7790.61Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADED GE KASFRVKA GRSSKEKDT+VKS KRKS AVDF+ LKRHGYKGGPS+L VPPPKENEKQDWSWS G
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTG

Query:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        +ETRENR TEESYEERQKTRAALENGEQLLTA TRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1GNF0 UPF0690 protein C1orf52 homolog2.3e-8395.56Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADED G+AKA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR

Query:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        ETRENR+TEESYEERQKTRAALENGEQLLTALT+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1JUH2 UPF0690 protein C1orf52 homolog1.3e-8396.11Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADED G+AKA FRVKAGRSSKEK TEVKSGKRKSIAVDFDTLKRHGYKGGPS+LKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGR

Query:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        ETRENR TEESYEERQKTRAALENGEQLLTALT+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  ETRENRNTEESYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein1.7e-3047.57Show/hide
Query:  KRAMPWSDEED----NSSSKESSLSQSDSDADE-DGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSW
        K  M W D++D    +SS + SS S SDS+ D  + GE K        +  K K    +  K+   A D+++L++HGYK    +  +P P   EKQDWSW
Subjt:  KRAMPWSDEED----NSSSKESSLSQSDSDADE-DGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSW

Query:  STGRETRENRNTEESYEERQKTR-AALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        +TG++ +     +ESY+ER+ TR AA+  GE +  A  R ++KN+SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSGFD+
Subjt:  STGRETRENRNTEESYEERQKTR-AALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGCAATGCCATGGAGTGATGAAGAGGACAACTCGTCATCGAAAGAGTCGTCTTTATCGCAGTCGGATTCAGATGCTGATGAAGATGGTGGTGAGGCAAAAGC
AAGCTTTCGAGTTAAAGCTGGACGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAAAGCGGAAGAGCATTGCTGTGGACTTTGATACATTGAAACGCCACGGCT
ACAAAGGCGGTCCATCAATCTTGAAAGTGCCACCGCCCAAAGAGAATGAGAAGCAAGATTGGTCATGGTCTACTGGTAGGGAGACTCGTGAAAACAGAAACACTGAAGAA
TCGTATGAAGAGAGACAGAAAACGAGGGCTGCTTTAGAAAATGGCGAGCAGCTGCTAACCGCGCTAACTCGGAAGGAGAAGAAGAATATATCCTTCTCCCAGAAGGAAAA
GAGGAAAAGAGAGCTTGGTCAAGCAAGCAGGGGGAAAAACTATGTCGAGGAAGAAAAGAGAACGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACCTGA
mRNA sequenceShow/hide mRNA sequence
AATTTTTCTAAATAAGAGAAAAAAAAGAGGGCTTCATTTTTCATTTCCTGAATTTCGCAAGCCCTAAATTCCGAACAAAGCTCAGTCGCCAGCTTCAAGCTCCGAATCTG
CGTTCGATTGGACTTCCTTTTCCATGAAAAGGGCAATGCCATGGAGTGATGAAGAGGACAACTCGTCATCGAAAGAGTCGTCTTTATCGCAGTCGGATTCAGATGCTGAT
GAAGATGGTGGTGAGGCAAAAGCAAGCTTTCGAGTTAAAGCTGGACGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAAAGCGGAAGAGCATTGCTGTGGACTT
TGATACATTGAAACGCCACGGCTACAAAGGCGGTCCATCAATCTTGAAAGTGCCACCGCCCAAAGAGAATGAGAAGCAAGATTGGTCATGGTCTACTGGTAGGGAGACTC
GTGAAAACAGAAACACTGAAGAATCGTATGAAGAGAGACAGAAAACGAGGGCTGCTTTAGAAAATGGCGAGCAGCTGCTAACCGCGCTAACTCGGAAGGAGAAGAAGAAT
ATATCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCAAGCAGGGGGAAAAACTATGTCGAGGAAGAAAAGAGAACGTTGAGGGAAAGTGGCATCTACTC
TGGTTTTGATACCTGACTTTTCCCATTTCAACTAATATTTAACAATCCATTTCATGTCAAAGCTTCATGTTGCAAGATCATCCTTGTAGCGGACTGTATTAATTACCTCC
AACAACAAGCAGCTGACAGGAACCAATGTCTAGTGCATTACGAAATATCAACTATCCTTATACATTTCGGGACGAGAACTGTATGTAAAGGAAACGATCATCTTCATGCT
TTTCCGGTACATATGAAAATAGGGTATAGCTGATCTTGTACCATTTAACGCTAGCATACTGGATATTCAGTTGTATCATGTTATGTTTTATGGTCATTGATAAAAACATC
TTCAATATCCCAACAGGTTGTATATGACAGTGAAAGAAGCTGTTTATCACCAA
Protein sequenceShow/hide protein sequence
MKRAMPWSDEEDNSSSKESSLSQSDSDADEDGGEAKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSILKVPPPKENEKQDWSWSTGRETRENRNTEE
SYEERQKTRAALENGEQLLTALTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT