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Sed0008485 (gene) of Chayote v1 genome

Gene IDSed0008485
OrganismSechium edule (Chayote v1)
DescriptionProtodermal factor 1 like
Genome locationLG07:3716278..3717632
RNA-Seq ExpressionSed0008485
SyntenySed0008485
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08167.1 uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]1.2e-4776Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE
        ++S FL LLLLL   S AAAAE AS R  GFL  RT GRCT +FWSSR+EAWPRMAPE+ATVAKIFGS A ERYGSEMTLM+AA    AEEE FGRVVKE
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE

Query:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        ATAALLNSYARR++FPYSAWEVKTL IKALVSK+AA L S+ FA ANESC
Subjt:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]3.4e-5078.15Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAA-AEAAEEEAFGRVVK
        ++SRFL+LLLLLC   AAA AE AS RR GFL  RT GRCT +FWSSR+EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AAA A   EEE FGRVVK
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAA-AEAAEEEAFGRVVK

Query:  EATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        EATAALLNSY RR+ FPYSAWEVKTLFIKALVSK+AA L S+ FA ANESC
Subjt:  EATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

XP_008451248.2 PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]5.5e-4876.67Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE
        ++S FL LLLLL   S AAAAE AS R  GFL  RT GRCT +FWSSR+EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AA    AEEE FGRVVKE
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE

Query:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        ATAALLNSYARR++FPYSAWEVKTL IKALVSK+AA L S+ FA ANESC
Subjt:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]6.0e-4776.62Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAA----AAEAAEEEAFGR
        ET R L  LLLL  A+ AAA EAA  RR GFL  RTRGRCTP FWSSR EAWPRMAPESATVAKIFGS A ERYGSEMTL+ AA    A E  EEEAFGR
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAA----AAEAAEEEAFGR

Query:  VVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        VVKEATAALLNSYARR +FPY+AWEVKTL IKALVSK+AAAL S+ FA ANESC
Subjt:  VVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

XP_038899192.1 uncharacterized protein LOC120086555 [Benincasa hispida]3.4e-5077.56Show/hide
Query:  ETSRFLH-LLLLLCLASA-AAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAA----EEEAF
        ++SR  + LLLLLC A A A AAEA S RR GFL  RTRGRCT +FWSS  EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AAAA  A    EEEAF
Subjt:  ETSRFLH-LLLLLCLASA-AAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAA----EEEAF

Query:  GRVVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        GRVVKEAT ALLNSYARR+EFPYSAWEVKTLFIKALVSK+AA L SR FA ANESC
Subjt:  GRVVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein1.7e-5078.15Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAA-AEAAEEEAFGRVVK
        ++SRFL+LLLLLC   AAA AE AS RR GFL  RT GRCT +FWSSR+EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AAA A   EEE FGRVVK
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAA-AEAAEEEAFGRVVK

Query:  EATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        EATAALLNSY RR+ FPYSAWEVKTLFIKALVSK+AA L S+ FA ANESC
Subjt:  EATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

A0A1S3BQF6 uncharacterized protein LOC1034925952.6e-4876.67Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE
        ++S FL LLLLL   S AAAAE AS R  GFL  RT GRCT +FWSSR+EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AA    AEEE FGRVVKE
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE

Query:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        ATAALLNSYARR++FPYSAWEVKTL IKALVSK+AA L S+ FA ANESC
Subjt:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

A0A5A7UZL8 Uncharacterized protein2.6e-4876.67Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE
        ++S FL LLLLL   S AAAAE AS R  GFL  RT GRCT +FWSSR+EAWPRMAPESATVAKIFGS A ERYGSEMTLM+AA    AEEE FGRVVKE
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE

Query:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        ATAALLNSYARR++FPYSAWEVKTL IKALVSK+AA L S+ FA ANESC
Subjt:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

A0A5D3C871 Uncharacterized protein5.9e-4876Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE
        ++S FL LLLLL   S AAAAE AS R  GFL  RT GRCT +FWSSR+EAWPRMAPE+ATVAKIFGS A ERYGSEMTLM+AA    AEEE FGRVVKE
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKE

Query:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        ATAALLNSYARR++FPYSAWEVKTL IKALVSK+AA L S+ FA ANESC
Subjt:  ATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

A0A6J1GR22 uncharacterized protein LOC1114562702.9e-4776.62Show/hide
Query:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAA----AAEAAEEEAFGR
        ET R L  LLLL  A+ AAA EAA  RR GFL  RTRGRCTP FWSSR EAWPRMAPESATVAKIFGS A ERYGSEMTL+ AA    A E  EEEAFGR
Subjt:  ETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAA----AAEAAEEEAFGR

Query:  VVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC
        VVKEATAALLNSYARR +FPY+AWEVKTL IKALVSK+AAAL S+ FA ANESC
Subjt:  VVKEATAALLNSYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20515.1 unknown protein1.4e-2851.56Show/hide
Query:  ASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFG-SGALERYGSEMTLMDAAAAEAAEEEAFGRVVKEATAALLNSYARRKEFPYSAWEV
        +S  R GF+  R RGRCTP++WSS+ EAWPRM PE +TV KIFG   A ER+ S++TL+++ A    E  A+G ++K+  AAL+NSYA RK F Y+ WEV
Subjt:  ASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFG-SGALERYGSEMTLMDAAAAEAAEEEAFGRVVKEATAALLNSYARRKEFPYSAWEV

Query:  KTLFIKALVSKQAAALHSRLFALANESC
        KT+ I+A+VS+ AA   +  FA+AN +C
Subjt:  KTLFIKALVSKQAAALHSRLFALANESC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCGAGACTTCTCGCTTCCTCCATCTTCTTCTCCTTCTCTGCCTCGCCTCCGCCGCCGCCGCCGCCGAAGCAGCATCCATCCGCCGCTCTGGATTTCTCTCCTT
AAGAACCAGAGGAAGATGCACACCACGGTTCTGGAGTAGTAGGACAGAAGCCTGGCCGAGAATGGCGCCGGAATCGGCGACGGTGGCGAAGATCTTCGGTTCCGGAGCTC
TTGAACGGTACGGATCAGAGATGACGTTAATGGACGCCGCCGCGGCGGAAGCCGCCGAAGAGGAGGCGTTCGGCAGAGTTGTGAAGGAGGCAACGGCAGCGTTGTTGAAC
TCGTATGCCAGAAGAAAGGAGTTTCCATATTCAGCCTGGGAGGTGAAGACATTGTTCATCAAAGCTTTGGTGTCTAAACAGGCGGCAGCTCTTCATTCTCGCCTTTTTGC
TCTCGCTAATGAGTCCTGCACTTAA
mRNA sequenceShow/hide mRNA sequence
GCGGGAGAAAGCTTTATTTTGAAACTTTGTTGAAGAAATCGAAACAAAATCCTTTTCCCCCCTAATCGGAGACGATGACGACCGAGACTTCTCGCTTCCTCCATCTTCTT
CTCCTTCTCTGCCTCGCCTCCGCCGCCGCCGCCGCCGAAGCAGCATCCATCCGCCGCTCTGGATTTCTCTCCTTAAGAACCAGAGGAAGATGCACACCACGGTTCTGGAG
TAGTAGGACAGAAGCCTGGCCGAGAATGGCGCCGGAATCGGCGACGGTGGCGAAGATCTTCGGTTCCGGAGCTCTTGAACGGTACGGATCAGAGATGACGTTAATGGACG
CCGCCGCGGCGGAAGCCGCCGAAGAGGAGGCGTTCGGCAGAGTTGTGAAGGAGGCAACGGCAGCGTTGTTGAACTCGTATGCCAGAAGAAAGGAGTTTCCATATTCAGCC
TGGGAGGTGAAGACATTGTTCATCAAAGCTTTGGTGTCTAAACAGGCGGCAGCTCTTCATTCTCGCCTTTTTGCTCTCGCTAATGAGTCCTGCACTTAACGACTATTCTC
ACGAGACAACCGTCGCTTCTACATTTGAGTTTTTAGTATTGTCTTAGTTTCACAAGTTGATAATCTTTATCAAGGATGTTGACTCTGGTTTTAGCAAGTTCTTAATTGTC
ATTCTATAATTTGTTGTTGTGCCCCTTGTTGTTAGCTTTCAATCTCATTTATCTAAAACAATGATGGGAGGTACGCTCAATTGATTCGTGATTAAATTGTAATCACACTT
TAGACCTATTTTTAGCATGTCTAACATCGAGAGCACATGCCACTTACCATTGAGTTATGCTCATTTGACATTTGAATAATGGTCTCTTCAAGAATAAAGATCATTTATAA
ACCTAAGAGGAGCGCAGTGGTTGAGCGTCTAGGCTTTGGGGATGTACTCCTCTCAAGATGTCAGGTTCGAGGTTTCTATGAAGATTAATTTTTTAGGCGACCTCATATTT
TGCTTCCGGTTCTACGATATATTTTGGTGCCAGAGTCTAGGGACATGCCACTCTAAAATGGATGAGTGTATTTGAGAACTCATCCATAAGAACAAGAGGTGTGAAATAAA
AAGTTTGGAAAGATACGAGCATGACTTCGAAAAAGGAATGAAAAAAGCTCTTAAGATTTCATTACTCAAACAAAATATAATATGCAATCTTAAAACTACTAGAACTCGC
Protein sequenceShow/hide protein sequence
MTTETSRFLHLLLLLCLASAAAAAEAASIRRSGFLSLRTRGRCTPRFWSSRTEAWPRMAPESATVAKIFGSGALERYGSEMTLMDAAAAEAAEEEAFGRVVKEATAALLN
SYARRKEFPYSAWEVKTLFIKALVSKQAAALHSRLFALANESCT