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Sed0008507 (gene) of Chayote v1 genome

Gene IDSed0008507
OrganismSechium edule (Chayote v1)
DescriptionCYSTM domain-containing protein
Genome locationLG04:38681321..38682971
RNA-Seq ExpressionSed0008507
SyntenySed0008507
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034744.1 cysteine-rich and transmembrane domain-containing protein A [Cucumis melo var. makuwa]1.0e-2277.61Show/hide
Query:  MAHEDANNKGCCHVEDAPDRPQ--SSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVS
        MAHEDA    CCHV DAPD+PQ   SG KSFRCP T+KKGN++FLEGCIFALCCCWICDACFDVSV+
Subjt:  MAHEDANNKGCCHVEDAPDRPQ--SSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVS

KAF4347676.1 hypothetical protein G4B88_011093 [Cannabis sativa]5.7e-1055.56Show/hide
Query:  VEDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG
        +++    P S   K+  C  TKKKG+R F+EGC+FALCCCW+CDACFDV+V  G
Subjt:  VEDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG

KAG6601144.1 hypothetical protein SDJN03_06377, partial [Cucurbita argyrosperma subsp. sororia]7.0e-2482.09Show/hide
Query:  MAHEDANNKGCCHV-EDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSV
        MA EDA NK CCHV  D P++PQ S KKSFRCPHT+KKGNRNFLEGCIFALCCCWICDACFDVSV+V
Subjt:  MAHEDANNKGCCHV-EDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSV

OAY36205.1 hypothetical protein MANES_11G003500v8 [Manihot esculenta]4.9e-0970.27Show/hide
Query:  CPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG
        CP++K KG+R+FLEGC+FALCCCWICD CFD +V +G
Subjt:  CPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG

PIN18306.1 hypothetical protein CDL12_09010 [Handroanthus impetiginosus]1.2e-0759.09Show/hide
Query:  DRPQSSGKKSFRC-PHTKKKGNRNFLEGCIFALCCCWICDACFD
        + P +  KK  +C P TK KG R FLEGC+FALCCCW+C+ CFD
Subjt:  DRPQSSGKKSFRC-PHTKKKGNRNFLEGCIFALCCCWICDACFD

TrEMBL top hitse value%identityAlignment
A0A067H6R0 CYSTM domain-containing protein7.6e-0854.55Show/hide
Query:  HEDANNKGCCHVEDAPDRPQSSGKKSFRCPHTKKKGN-RNFLEGCIFALCCCWICDACFDVSVSVG
        HE+A  KG         R  S   + F    TKKKGN R+F+EGC+FALCCCWICDACFDV+V  G
Subjt:  HEDANNKGCCHVEDAPDRPQSSGKKSFRCPHTKKKGN-RNFLEGCIFALCCCWICDACFDVSVSVG

A0A2C9UYA0 CYSTM domain-containing protein2.3e-0970.27Show/hide
Query:  CPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG
        CP++K KG+R+FLEGC+FALCCCWICD CFD +V +G
Subjt:  CPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG

A0A2G9HL92 CYSTM domain-containing protein5.8e-0859.09Show/hide
Query:  DRPQSSGKKSFRC-PHTKKKGNRNFLEGCIFALCCCWICDACFD
        + P +  KK  +C P TK KG R FLEGC+FALCCCW+C+ CFD
Subjt:  DRPQSSGKKSFRC-PHTKKKGNRNFLEGCIFALCCCWICDACFD

A0A5D3CBC6 Cysteine-rich and transmembrane domain-containing protein A4.9e-2377.61Show/hide
Query:  MAHEDANNKGCCHVEDAPDRPQ--SSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVS
        MAHEDA    CCHV DAPD+PQ   SG KSFRCP T+KKGN++FLEGCIFALCCCWICDACFDVSV+
Subjt:  MAHEDANNKGCCHVEDAPDRPQ--SSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVS

A0A7J6DNZ5 CYSTM domain-containing protein2.8e-1055.56Show/hide
Query:  VEDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG
        +++    P S   K+  C  TKKKG+R F+EGC+FALCCCW+CDACFDV+V  G
Subjt:  VEDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein6.5e-0453.57Show/hide
Query:  HTKKKGNRNFLEGCIFALCCCWICDACF
        H +++ +  FLEGC+ ALCCC + DACF
Subjt:  HTKKKGNRNFLEGCIFALCCCWICDACF

AT5G04080.1 unknown protein2.3e-0955.32Show/hide
Query:  EDAPDRP-QSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACF
        E   ++P Q   KK  R   TK+KG+R F+EGC+FALCCCWIC+ CF
Subjt:  EDAPDRP-QSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACACGAAGACGCAAACAACAAAGGGTGCTGCCATGTAGAAGATGCTCCAGACCGGCCTCAGTCATCAGGAAAAAAGAGTTTTCGATGCCCGCATACGAAAAAGAA
AGGGAACAGAAACTTCCTTGAAGGATGCATCTTTGCATTATGCTGTTGTTGGATCTGTGATGCTTGCTTTGATGTTAGTGTGAGTGTCGGATAA
mRNA sequenceShow/hide mRNA sequence
AAGTACACCACTTTATAAGCAGAAGGCAAGCAACACAAGGGCTGTTCATTGAGATGGGAGAGAACTAACCATTCCTTTGCAACAGGTTTCAGAGCAGTGAAATCTTAGGA
ACACTAATCTGTCTTTCGTCCAATGGCACACGAAGACGCAAACAACAAAGGGTGCTGCCATGTAGAAGATGCTCCAGACCGGCCTCAGTCATCAGGAAAAAAGAGTTTTC
GATGCCCGCATACGAAAAAGAAAGGGAACAGAAACTTCCTTGAAGGATGCATCTTTGCATTATGCTGTTGTTGGATCTGTGATGCTTGCTTTGATGTTAGTGTGAGTGTC
GGATAAACATCAGCTGTAGAAGTACTTACACCAGATGCATAACCTACAGCCAACTACCTATCAATTTTACAGTTATGCCATTACCGAATTATGTATCCATGTGATCTATC
ACCTTCTATGAAATCATCTTTGTATTTTCGTTCAGTATTGCAAGGATCTAAATATCTTCCAAATAGTTTGTCTCTGCATAATATTGACTTGGGTCAACATTAATTTACCA
ATTAGAAGCATGCAAGATAGTGATTAATTGCGATAAGTCCAAGCCTTCGACCAACGGCTAATTGTGACCCACCTAGCATGGTCATATATACTAAGACCTTATTCACATTG
TGAAGAAAGGCTGAATGGAAGGGGGCAGTCAGCTAGCTGCTTCTTCGCTACACCTCTTGCAGCTAGATACACAATACTCAATCTAAATTCTAAAGTAGAAAATTGCATAC
CATTCATCGATATACGTATAGGAACATATGTACATGATACAAAATGTCATCAGGTCAAAATGAAAAATTGGCTCAAGTCTCAAAACTTTTGCTAAAATCATAAACGAACC
TGCCCTCGGTTTTCATATTTTCTAGTGACTTCCATCCTTGTAAC
Protein sequenceShow/hide protein sequence
MAHEDANNKGCCHVEDAPDRPQSSGKKSFRCPHTKKKGNRNFLEGCIFALCCCWICDACFDVSVSVG