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Sed0008517 (gene) of Chayote v1 genome

Gene IDSed0008517
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L14-2-like
Genome locationLG09:8517900..8520241
RNA-Seq ExpressionSed0008517
SyntenySed0008517
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0007018 - microtubule-based movement (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003774 - motor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA83469.1 Csf-1, partial [Cucumis sativus]1.6e-6294.85Show/hide
Query:  ATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK
        A  MPFKRY+EIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKK
Subjt:  ATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK

Query:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        RRASLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

KAG6574906.1 Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]7.1e-6393.53Show/hide
Query:  LKNATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLI
        L  A  MPFKRY+EIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWE+SSWGRKLI
Subjt:  LKNATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLI

Query:  VKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        VKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  VKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

KAG6593830.1 Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6374.6Show/hide
Query:  RRRPKTRFPIWIQTSSEGPINFGGSYIKATFSLHFAP----------LQTLKNATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDME
        RR   TR+PI  +  S         +  A    HF P          +  +K A  MPFKRY+EIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDME
Subjt:  RRRPKTRFPIWIQTSSEGPINFGGSYIKATFSLHFAP----------LQTLKNATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDME

Query:  RSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        RSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  RSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

XP_004147153.1 60S ribosomal protein L14-2 [Cucumis sativus]2.7e-6296.24Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

XP_023006320.1 60S ribosomal protein L14-2-like [Cucurbita maxima]1.2e-6296.99Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

TrEMBL top hitse value%identityAlignment
A0A0A0LIH9 Ribosomal_L14e domain-containing protein1.3e-6296.24Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A1S3CD11 60S ribosomal protein L14-2-like1.3e-6296.24Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A6J1HJJ9 60S ribosomal protein L14-2-like2.2e-6296.24Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A6J1KZT6 60S ribosomal protein L14-2-like5.8e-6396.99Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKRY+EIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKKRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

Q9SXL9 Csf-1 protein (Fragment)7.6e-6394.85Show/hide
Query:  ATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK
        A  MPFKRY+EIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKEL+EAM+AGDVQKKWENSSWGRKLIVKK
Subjt:  ATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK

Query:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        RRASLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L145.5e-2649.62Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKR
        M F+R++EIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K       K   + +A +  ++ KKWE S   +K+  K++
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKR

Query:  RASLNDFDRFKLMLAKIKRAGLVRQELSKLKKA
        R +L DF+RFKLM AK  R  L++ E  KL+KA
Subjt:  RASLNDFDRFKLMLAKIKRAGLVRQELSKLKKA

P55844 Probable 60S ribosomal protein L141.1e-5380.45Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        MPFKR++EIGRVALINYG+DYG+LVVIVDVIDQ RALVDAPDMERS +NFKRLSLTD+KIDIKRVPKKK+L++A++A DV+ KW  SSWGRKLIVKK RA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        +LNDFDRFK+MLAKIKRA  VRQEL+KLKK  A
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

Q7XYA7 60S ribosomal protein L141.0e-2446.97Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDIKI-DIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK
        M F R++E GRVAL++YGE   KLVVIVD++DQNR LVD+P   ++R  +N KR++LT IK+ DI R     E+     A  V + +  S WG+KL  ++
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDIKI-DIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKK

Query:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLK
        +RA+L+DF RFK+M+A++K++  +  EL+KLK
Subjt:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLK

Q9SIM4 60S ribosomal protein L14-14.8e-5482.31Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        M FKR++EIGRVAL+NYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI IDI RVPKKK L+EAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

Q9T043 60S ribosomal protein L14-21.3e-5483.08Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        M FKRY+EIGRVAL+NYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI IDI RVPKKK L+EAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L143.4e-5582.31Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        M FKR++EIGRVAL+NYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI IDI RVPKKK L+EAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

AT4G27090.1 Ribosomal protein L148.9e-5683.08Show/hide
Query:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA
        M FKRY+EIGRVAL+NYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI IDI RVPKKK L+EAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGGAGAAGGCCCAAAACAAGGTTTCCAATTTGGATCCAAACTTCATCGGAAGGCCCAATTAACTTCGGAGGCTCTTATATAAAGGCAACCTTCAGTCTCCACTT
TGCGCCGTTGCAAACCCTAAAGAACGCCACAACAATGCCGTTCAAGAGGTATATCGAGATCGGAAGGGTTGCCCTCATCAACTACGGCGAAGACTATGGAAAGCTCGTTG
TCATCGTTGATGTTATCGACCAGAATCGGGCTCTTGTTGATGCCCCTGACATGGAGCGATCTCAAATGAATTTCAAGAGACTCTCTTTAACAGATATCAAAATTGATATT
AAGAGGGTTCCCAAGAAGAAGGAGCTGATGGAAGCCATGCAAGCTGGAGATGTTCAGAAGAAATGGGAAAACAGCTCATGGGGCAGAAAATTGATCGTTAAGAAGAGAAG
AGCTTCACTCAATGATTTTGACAGGTTCAAGCTCATGTTGGCCAAGATTAAGAGGGCTGGTTTGGTTAGGCAAGAACTTTCAAAGTTGAAGAAGGCCGAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGGAGAAGGCCCAAAACAAGGTTTCCAATTTGGATCCAAACTTCATCGGAAGGCCCAATTAACTTCGGAGGCTCTTATATAAAGGCAACCTTCAGTCTCCACTT
TGCGCCGTTGCAAACCCTAAAGAACGCCACAACAATGCCGTTCAAGAGGTATATCGAGATCGGAAGGGTTGCCCTCATCAACTACGGCGAAGACTATGGAAAGCTCGTTG
TCATCGTTGATGTTATCGACCAGAATCGGGCTCTTGTTGATGCCCCTGACATGGAGCGATCTCAAATGAATTTCAAGAGACTCTCTTTAACAGATATCAAAATTGATATT
AAGAGGGTTCCCAAGAAGAAGGAGCTGATGGAAGCCATGCAAGCTGGAGATGTTCAGAAGAAATGGGAAAACAGCTCATGGGGCAGAAAATTGATCGTTAAGAAGAGAAG
AGCTTCACTCAATGATTTTGACAGGTTCAAGCTCATGTTGGCCAAGATTAAGAGGGCTGGTTTGGTTAGGCAAGAACTTTCAAAGTTGAAGAAGGCCGAGGCCTAGAGGT
TATTTTTTTCAACGGATTTTGTCTTTTTGTTGTCAACTTTCCTTAACTTTTATAGGTCGTTGATTTTAGTTCCAAACTTTGTGTACCGGTATCATTGCATTAAGTCGTTG
TGTTTCAACTACCATTTTAAAATCTTATTACGCCAATTTCTTATTTGGGTTTCAATTTTCTCAACTTTTTATCATTTTAGTGTAAAATGTCTTTTGTGTTAATTTAATTG
AATGCAAGTTCTGGCCTTAGATGGGTGAGTCTTTCTTAGTACTACAATATTTGGGGTTTGGTGATTTAAGTTGAATGATGAGTG
Protein sequenceShow/hide protein sequence
MGRRRPKTRFPIWIQTSSEGPINFGGSYIKATFSLHFAPLQTLKNATTMPFKRYIEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDI
KRVPKKKELMEAMQAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA