CuGenDBv2

Gene ID	Sed0008521
Organism	Sechium edule (Chayote v1)
Description	Malate dehydrogenase
Genome location	LG12:6813243..6814165
RNA-Seq Expression	Sed0008521
Synteny	Sed0008521
Gene Ontology terms	NA
InterPro domains	IPR008480 - Protein of unknown function DUF761, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7028827.1 hypothetical protein SDJN02_10009, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.1e-58

73.54

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL N+LR KFHAL ISRSIN  TRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +++Q D ++ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  A  IA TSRGKEV EE    ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

XP_022941710.1 uncharacterized protein LOC111446987 [Cucurbita moschata]

1.4e-58

74.07

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL N+LR KFHAL ISRSIN  TRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +++Q D ++ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  AA IA TSRGKEV EE    ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

XP_022975067.1 uncharacterized protein LOC111474038 [Cucurbita maxima]

2.6e-60

76.47

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL N+LR KFHAL ISRSIN ATRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +L+Q D H+ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  AA IA TSRGKEV EE  ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

XP_023522373.1 uncharacterized protein LOC111786293 [Cucurbita pepo subsp. pepo]

2.4e-58

74.07

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL ++LR KFHAL ISRSIN  TRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +L+Q D ++ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  AA IA TSRGKEV EE    ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

XP_038903123.1 uncharacterized protein LOC120089795 [Benincasa hispida]

1.2e-60

72.86

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHH----LRQNDPHLHNPN
        MSR+ MEKKLRTAKK+ KKL  SL+SKFHAL IS+SINTATRRL SAVQRSLRLLIPSKF  RRRL SP SSPSPY+RRNQN +    L Q D HLHNPN
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHH----LRQNDPHLHNPN

Query:  NFPAIHIDELFAD------PAAAAAIAGTSRGKEV----TEEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        NF AIHIDELFA+        +   I  TSRGKEV     +EET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FRREI+L+KEKSLLE++QMLARS
Subjt:  NFPAIHIDELFAD------PAAAAAIAGTSRGKEV----TEEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L896 Uncharacterized protein

3.9e-54

68.32

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHH--LRQ-NDPHLHNPNN
        MSR  MEKKLRTAKK+ KKL  SL+SKFHAL IS+SINTA RRLISAVQ SLRLLIPSKF   RRL    SSPS Y+ RNQN +  LR  +D H HNPNN
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHH--LRQ-NDPHLHNPNN

Query:  FPAIHIDELF---ADPAA---AAAIAGTSRGKEVT--------EEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLA
        F AIHIDELF   +DP A      I  TSRGKEV         +EET+++SIEDAWKIVVASSPHL+PVDERAEEFIR FRREI+L+KEKSLLE+++MLA
Subjt:  FPAIHIDELF---ADPAA---AAAIAGTSRGKEVT--------EEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLA

Query:  RS
        RS
Subjt:  RS

A0A1S3AW79 uncharacterized protein LOC103483588

3.0e-54

67.33

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPY-FRRNQNHH--LRQ-NDPHLHNPN
        MSRT MEKKLRTA+K+ KKL  SL+SKFHAL IS+SINTA RRL+SAVQ SLR+LIPSKF   RRL  P SSPS Y + RNQN +  LR  +D H HNPN
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPY-FRRNQNHH--LRQ-NDPHLHNPN

Query:  NFPAIHIDELFAD------PAAAAAIAGTSRGKEVT-------EEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLA
        NF AIHIDELF D        + A I  TSRGKEV        E+ET+++SIEDAWKIVVASSPHL+PVDERAEEFIR FRREI+L+KEKSLLE+++MLA
Subjt:  NFPAIHIDELFAD------PAAAAAIAGTSRGKEVT-------EEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLA

Query:  RS
        RS
Subjt:  RS

A0A6J1FUH9 uncharacterized protein LOC111446987

6.9e-59

74.07

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL N+LR KFHAL ISRSIN  TRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +++Q D ++ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  AA IA TSRGKEV EE    ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE----ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

A0A6J1IAE8 uncharacterized protein LOC111473184

3.4e-58

75.82

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Query:  MEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPAIHIDE
        MEKKLRTAKK+ KKL N+LR KFHAL ISRSIN ATRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +L+Q D H+ NPNNF  IHIDE
Subjt:  MEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPAIHIDE

Query:  LFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        LFADP  AA IA TSRGKEV EE  ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  LFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

A0A6J1IC02 uncharacterized protein LOC111474038

1.3e-60

76.47

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA
        MSRTKMEKKLRTAKK+ KKL N+LR KFHAL ISRSIN ATRRL S VQRSL LL PSKF  RRRL    SSPS Y+RR+QN +L+Q D H+ NPNNF  
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPA

Query:  IHIDELFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS
        IHIDELFADP  AA IA TSRGKEV EE  ET+V+SIEDAWKIVVASSPHL+PVDERAEEFIR FR EI+L+KEKSLLE+QQMLARS
Subjt:  IHIDELFADPAAAAAIAGTSRGKEVTEE--ETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G14380.1 unknown protein

2.1e-12

32.68

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Query:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQN--DPHLHNPNNF
        M+  + +KK   AK++ K   N ++SKF  + I+ S+  +T R+   + R  RL++P    R R L + + +   Y+ RNQ+     N     L  P   
Subjt:  MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQN--DPHLHNPNNF

Query:  PAIHIDEL-----FADPAAAAAIAGTSRG--------KEVTEEE-----TAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQ
           + DE      +   +     +G+           KE  EEE         S+EDAW+ VVA+SPHLQ V+ERA+EFI  FR  + ++KE+S LE+Q+
Subjt:  PAIHIDEL-----FADPAAAAAIAGTSRG--------KEVTEEE-----TAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQ

Query:  MLARS
         L RS
Subjt:  MLARS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCACGCACAAAAATGGAGAAGAAGCTCCGTACGGCGAAGAAATCATGTAAGAAACTGGCCAACTCACTGCGATCCAAATTCCACGCGCTCGGCATCTCCAGATCCAT
CAACACAGCCACGCGCCGCCTCATCTCCGCCGTCCAGCGCTCCCTCCGCCTCCTAATCCCCTCGAAATTTCGCCGCCGCCGCCGCCTTCCAAGCCCTAATTCCTCTCCTT
CTCCCTATTTCCGTCGCAATCAAAATCACCACCTCCGCCAGAACGATCCACACCTCCACAATCCGAACAACTTCCCGGCGATCCACATCGACGAGCTCTTCGCCGATCCG
GCGGCGGCGGCGGCGATTGCAGGGACGAGCAGGGGAAAAGAGGTGACGGAAGAGGAGACGGCGGTTCACAGCATTGAAGATGCTTGGAAAATCGTGGTGGCGTCGTCGCC
GCATCTTCAGCCGGTGGATGAAAGGGCGGAGGAGTTCATAAGGAATTTCCGGCGAGAGATTGTTCTGGACAAGGAGAAATCGCTTCTTGAATACCAACAGATGCTGGCTC
GCAGTACCTGA

mRNA sequence

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GAAAAAATGATTTTCTTCCACAGCCCCATAAAAAGCATCCATTAATCATTACCACAAACCATTCTTCTGCAAATCTCTCTCTCCTCCAATGTCACGCACAAAAATGGAGA
AGAAGCTCCGTACGGCGAAGAAATCATGTAAGAAACTGGCCAACTCACTGCGATCCAAATTCCACGCGCTCGGCATCTCCAGATCCATCAACACAGCCACGCGCCGCCTC
ATCTCCGCCGTCCAGCGCTCCCTCCGCCTCCTAATCCCCTCGAAATTTCGCCGCCGCCGCCGCCTTCCAAGCCCTAATTCCTCTCCTTCTCCCTATTTCCGTCGCAATCA
AAATCACCACCTCCGCCAGAACGATCCACACCTCCACAATCCGAACAACTTCCCGGCGATCCACATCGACGAGCTCTTCGCCGATCCGGCGGCGGCGGCGGCGATTGCAG
GGACGAGCAGGGGAAAAGAGGTGACGGAAGAGGAGACGGCGGTTCACAGCATTGAAGATGCTTGGAAAATCGTGGTGGCGTCGTCGCCGCATCTTCAGCCGGTGGATGAA
AGGGCGGAGGAGTTCATAAGGAATTTCCGGCGAGAGATTGTTCTGGACAAGGAGAAATCGCTTCTTGAATACCAACAGATGCTGGCTCGCAGTACCTGATTGTTCTTCAT
GAATTCGTTTGATTTGATTATACATGTTCATAATGAATGTATATGGATCTTGTTTTCGTTTTTTTTTACAGGTAAAAACACATGAGATTCACAAAAATGATGTGATTGAA
TTTTTTTTTTTTTTTTTTGGGATTTTTTGGAAAAGGGATTTTTAGTATATATATATTTTTTACAGAGTGGTTTGAATATAGAGTGTGCTTGGATGATGTTGAAATGGGAC
TGATAATTTTTCTTTACTATGGAAGTGAATTTGGTTTTCGGTT

Protein sequence

Show/hide protein sequence

MSRTKMEKKLRTAKKSCKKLANSLRSKFHALGISRSINTATRRLISAVQRSLRLLIPSKFRRRRRLPSPNSSPSPYFRRNQNHHLRQNDPHLHNPNNFPAIHIDELFADP
AAAAAIAGTSRGKEVTEEETAVHSIEDAWKIVVASSPHLQPVDERAEEFIRNFRREIVLDKEKSLLEYQQMLARST

Sed0008521 (gene) of Chayote v1 genome