; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008530 (gene) of Chayote v1 genome

Gene IDSed0008530
OrganismSechium edule (Chayote v1)
DescriptionDUF4219 domain-containing protein
Genome locationLG08:19571745..19573006
RNA-Seq ExpressionSed0008530
SyntenySed0008530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV73185.1 DUF4219 domain-containing protein [Cephalotus follicularis]1.1e-1226.1Show/hide
Query:  PPFFDGLNYNIWKNRIKTFMLGMDLNI-------LYVCEHNLSKLKLNI-----ELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN
        PPFFDG +YN WK ++ TF+  +D ++       L + +  +SK K+       E+L LNAKA +I++CAL    FD+IS  E A ++W+ LE+      
Subjt:  PPFFDGLNYNIWKNRIKTFMLGMDLNI-------LYVCEHNLSKLKLNI-----ELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN

Query:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESD-EDEITREPL--SYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN
                         H ++N+  V        + CLMA   + S +ES+ E   T E L  +Y++L++ +E+    ++ L    + L+K+ +IL  EN
Subjt:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESD-EDEITREPL--SYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN

Query:  N----------------LGKNDLLHILK-------EKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK
        +                + + D+L++         E+  +   + +  K+S    + ++ +L+  +G+ +   DK  L Y +       KN FVK
Subjt:  N----------------LGKNDLLHILK-------EKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK

KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]6.5e-1636.13Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------
        ++L LM  S  D  +E D DE+T EP S +ELF  FE++Q+DLEKL SKYV L KK  +LS EN                                    
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------

Query:  ------------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVKGTPYISK
                    +  K++L+ +LKE E+   +D +  KE+IK LT  AQRL+K I + K + DK+SL Y+DE+ + S K  FVK +P + K
Subjt:  ------------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVKGTPYISK

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]2.8e-1943.86Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENN--------LGKND-----LLHILKEKEMRASKDFE
        ++ C MA+S  D  +E D DE+  +PLSYDELF AFE+MQ++LEKL SKYV L  K  + + EN         L KN+     L+ +LK+ E  A  + +
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENN--------LGKND-----LLHILKEKEMRASKDFE

Query:  ITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDE--NPSSSCKNIFVKGTPYISKIVLPNATNLISSK
          K+ IK LT  AQRL+K I   KP+ DK+ L Y++E   PSSS K IFVK +P + K+V P      S K
Subjt:  ITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDE--NPSSSCKNIFVKGTPYISKIVLPNATNLISSK

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]9.4e-1540.76Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNA
        ++ C MA+S  D  +E D DEIT +PLSYDELF AFE+MQ+DLEKLV                                     + +  K+SIK LT  A
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNA

Query:  QRLNKTIGMDKPFNDKKSLDYVDE-NPSSSCKNIFVKGTPYISKIVLPNATNLISSK
        QRL+K I + KP+ DK+ L Y+DE +  SS K IFVK +P + K+V P    L +SK
Subjt:  QRLNKTIGMDKPFNDKKSLDYVDE-NPSSSCKNIFVKGTPYISKIVLPNATNLISSK

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]3.4e-1735.44Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------
        ++L LMA+S  D   +  +D++T EPLS DELF  FESMQ+DLEKL SKYV L KK  +L  EN                                    
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------

Query:  -----------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPS-SSCKNIFVKGTPYISKIVLPN-ATN
                   +  K++L+ +LKE E+   ++ +  KE+IK LT  AQRL+K I + K + DK+ L Y+DE+ + SS K  FVK +P + K  + N  +N
Subjt:  -----------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPS-SSCKNIFVKGTPYISKIVLPN-ATN

Query:  LISSKF
         + S F
Subjt:  LISSKF

TrEMBL top hitse value%identityAlignment
A0A1Q3BU93 DUF4219 domain-containing protein1.2e-1226.09Show/hide
Query:  PPFFDGLNYNIWKNRIKTF------------MLGMDLNILYVCEHNLSKLKLNIELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN
        PPFFDG +Y+ WK ++ TF            + G++L   Y+ +  +   +   E+L LNAKA +II+CAL    FD+IS  E A ++W+ LE+      
Subjt:  PPFFDGLNYNIWKNRIKTF------------MLGMDLNILYVCEHNLSKLKLNIELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN

Query:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLG
                         H ++NI  V        + CLMA   +D++ ++ E+E+     ++DEL NA+E++  + E +  K   L K    LS E    
Subjt:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLG

Query:  KNDLLHILKEKEMRASK------------------------------DFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK
        KN+    LKE E    K                              + +  K++    + ++ +L+  +G+ +   DK  L Y +       KN FVK
Subjt:  KNDLLHILKEKEMRASK------------------------------DFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK

A0A1Q3BYT7 DUF4219 domain-containing protein5.5e-1326.1Show/hide
Query:  PPFFDGLNYNIWKNRIKTFMLGMDLNI-------LYVCEHNLSKLKLNI-----ELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN
        PPFFDG +YN WK ++ TF+  +D ++       L + +  +SK K+       E+L LNAKA +I++CAL    FD+IS  E A ++W+ LE+      
Subjt:  PPFFDGLNYNIWKNRIKTFMLGMDLNI-------LYVCEHNLSKLKLNI-----ELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVEN

Query:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESD-EDEITREPL--SYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN
                         H ++N+  V        + CLMA   + S +ES+ E   T E L  +Y++L++ +E+    ++ L    + L+K+ +IL  EN
Subjt:  SPCISNDLFDVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESD-EDEITREPL--SYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN

Query:  N----------------LGKNDLLHILK-------EKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK
        +                + + D+L++         E+  +   + +  K+S    + ++ +L+  +G+ +   DK  L Y +       KN FVK
Subjt:  N----------------LGKNDLLHILK-------EKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVK

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.1e-1636.13Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------
        ++L LM  S  D  +E D DE+T EP S +ELF  FE++Q+DLEKL SKYV L KK  +LS EN                                    
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFEN------------------------------------

Query:  ------------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVKGTPYISK
                    +  K++L+ +LKE E+   +D +  KE+IK LT  AQRL+K I + K + DK+SL Y+DE+ + S K  FVK +P + K
Subjt:  ------------NLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVKGTPYISK

A0A6J1DS74 uncharacterized protein LOC1110238061.4e-1943.86Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENN--------LGKND-----LLHILKEKEMRASKDFE
        ++ C MA+S  D  +E D DE+  +PLSYDELF AFE+MQ++LEKL SKYV L  K  + + EN         L KN+     L+ +LK+ E  A  + +
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENN--------LGKND-----LLHILKEKEMRASKDFE

Query:  ITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDE--NPSSSCKNIFVKGTPYISKIVLPNATNLISSK
          K+ IK LT  AQRL+K I   KP+ DK+ L Y++E   PSSS K IFVK +P + K+V P      S K
Subjt:  ITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDE--NPSSSCKNIFVKGTPYISKIVLPNATNLISSK

A0A6J1DY46 uncharacterized protein LOC1110252594.5e-1540.76Show/hide
Query:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNA
        ++ C MA+S  D  +E D DEIT +PLSYDELF AFE+MQ+DLEKLV                                     + +  K+SIK LT  A
Subjt:  SSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLGKNDLLHILKEKEMRASKDFEITKESIKNLTTNA

Query:  QRLNKTIGMDKPFNDKKSLDYVDE-NPSSSCKNIFVKGTPYISKIVLPNATNLISSK
        QRL+K I + KP+ DK+ L Y+DE +  SS K IFVK +P + K+V P    L +SK
Subjt:  QRLNKTIGMDKPFNDKKSLDYVDE-NPSSSCKNIFVKGTPYISKIVLPNATNLISSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTTTAAATTTTGAAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATAATATTTGGAAAAATAGAATAAAGACTTTTATGCTTGGTATGGA
TTTAAATATTTTATATGTTTGTGAGCATAATTTGTCTAAACTAAAATTGAATATTGAGTTGCTCACTTTAAATGCTAAAGCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTGATAAAATTTCACACTTTGAATATGCATATGATGTTTGGAATTCTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTGTATTTCTAATGATTTATTT
GATGTGAAGGAGAATTATAATTCTCACAACCAAGAAAATATTCATAAAGTGGAAAAGAAGAAATGTGCTAAATCTTCCTTATGCTTGATGGCTAATTCAAGTAATGATTC
CAACAATGAAAGCGATGAAGATGAGATAACTCGAGAACCTCTTTCTTATGATGAGTTATTTAATGCATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ACGTCAAACTCTCAAAGAAGAATAAAATTTTATCTTTTGAAAATAATCTTGGTAAAAATGATCTTTTGCATATACTTAAAGAAAAAGAAATGAGGGCTAGTAAAGACTTT
GAAATTACAAAAGAATCTATTAAAAATTTAACTACTAATGCTCAAAGATTAAATAAAACTATTGGCATGGATAAACCTTTTAATGATAAAAAGAGTTTAGACTATGTGGA
TGAAAATCCTTCATCTAGCTGTAAGAACATTTTTGTTAAGGGTACTCCTTATATATCTAAAATTGTTTTACCAAATGCGACAAATTTGATTAGTTCTAAATTCTCGTCAA
AGAATGAACAAAAGAGAAATATTTATCGAAATTTAAACTGTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACTTTAAATTTTGAAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATAATATTTGGAAAAATAGAATAAAGACTTTTATGCTTGGTATGGA
TTTAAATATTTTATATGTTTGTGAGCATAATTTGTCTAAACTAAAATTGAATATTGAGTTGCTCACTTTAAATGCTAAAGCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTGATAAAATTTCACACTTTGAATATGCATATGATGTTTGGAATTCTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTGTATTTCTAATGATTTATTT
GATGTGAAGGAGAATTATAATTCTCACAACCAAGAAAATATTCATAAAGTGGAAAAGAAGAAATGTGCTAAATCTTCCTTATGCTTGATGGCTAATTCAAGTAATGATTC
CAACAATGAAAGCGATGAAGATGAGATAACTCGAGAACCTCTTTCTTATGATGAGTTATTTAATGCATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ACGTCAAACTCTCAAAGAAGAATAAAATTTTATCTTTTGAAAATAATCTTGGTAAAAATGATCTTTTGCATATACTTAAAGAAAAAGAAATGAGGGCTAGTAAAGACTTT
GAAATTACAAAAGAATCTATTAAAAATTTAACTACTAATGCTCAAAGATTAAATAAAACTATTGGCATGGATAAACCTTTTAATGATAAAAAGAGTTTAGACTATGTGGA
TGAAAATCCTTCATCTAGCTGTAAGAACATTTTTGTTAAGGGTACTCCTTATATATCTAAAATTGTTTTACCAAATGCGACAAATTTGATTAGTTCTAAATTCTCGTCAA
AGAATGAACAAAAGAGAAATATTTATCGAAATTTAAACTGTGCATAG
Protein sequenceShow/hide protein sequence
MTTLNFESDSNDRPPFFDGLNYNIWKNRIKTFMLGMDLNILYVCEHNLSKLKLNIELLTLNAKALNIIYCALDRKIFDKISHFEYAYDVWNSLENMYSVENSPCISNDLF
DVKENYNSHNQENIHKVEKKKCAKSSLCLMANSSNDSNNESDEDEITREPLSYDELFNAFESMQHDLEKLVSKYVKLSKKNKILSFENNLGKNDLLHILKEKEMRASKDF
EITKESIKNLTTNAQRLNKTIGMDKPFNDKKSLDYVDENPSSSCKNIFVKGTPYISKIVLPNATNLISSKFSSKNEQKRNIYRNLNCA