; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008555 (gene) of Chayote v1 genome

Gene IDSed0008555
OrganismSechium edule (Chayote v1)
Descriptionscarecrow-like transcription factor 11 (SCL11)
Genome locationLG05:40477919..40480924
RNA-Seq ExpressionSed0008555
SyntenySed0008555
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
InterPro domainsIPR019324 - M-phase phosphoprotein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570693.1 hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia]3.3e-7181.38Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QREEQPKKEEEVKP ENFFPSST+IRKCVVLVEGDPHPG   GRMSFQ FNPSID+LN EVASLGQ EIPGSSSGNHSGN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSR+NGSS+NE  CSNIDEKNCE   DLKRKQ + VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
XP_022943952.1 uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]2.1e-7079.79Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QRE+QPK+EEEVKP ENFFPSST+IRKCVVLVEGDPHPG   GRMSFQ FNPSID+LN E+ASLGQ EIPGSSSGNHSGN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSR+NGSS+NE  CSNIDEKNCE   DLKRKQ + VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
XP_022947916.1 uncharacterized protein LOC111451657 [Cucurbita moschata]1.5e-6879.79Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RE+S+TLRNLKFMQRAAQ+EEQPKKEEEVKP EN FPSS +IRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLN EVASLGQ E P  SSGNHS N
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSRENGSSRNE   SN DEKNCE  GDLKRKQ + VSE R+PTKFPKSGRD QQSSFNN K  FKKPKGE L WNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
XP_023512013.1 uncharacterized protein LOC111776852 isoform X2 [Cucurbita pepo subsp. pepo]8.9e-6980.32Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QREEQPKKEEEVK  ENFFPSST+IRKCVVLVEG PHPG   GRMSFQ FNPSID+LN EVASLGQ EIPGSSSGNHSGN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSR+NGSS+NE  CSNIDEKNCE   DLKRKQ + VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
XP_023532308.1 uncharacterized protein LOC111794500 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-6980.32Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RE+S+TLRNLKFMQRAAQ+EEQPKKEEEVKP EN FPSS +IRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLN EVASLGQ E P SSSGNHS N
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSRENGSSRNE   SN DEKNCE  GDLKRKQ + VSE R+PTKFPKSGRD QQSSFNN K  FKKPKGE L WNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
TrEMBL top hitse value%identityAlignment
A0A6J1FT40 uncharacterized protein LOC111448524 isoform X11.2e-6876.92Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QRE+QPK+EEEVKP ENFFPSST+IRKCVVLVEGDPHPG   GRMSFQ FNPSID+LN E+ASLGQ EIPGSSSGNHSGN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSS-------RENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SS       R+NGSS+NE  CSNIDEKNCE   DLKRKQ + VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSS-------RENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
A0A6J1FUG1 uncharacterized protein LOC111448524 isoform X21.0e-7079.79Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QRE+QPK+EEEVKP ENFFPSST+IRKCVVLVEGDPHPG   GRMSFQ FNPSID+LN E+ASLGQ EIPGSSSGNHSGN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSR+NGSS+NE  CSNIDEKNCE   DLKRKQ + VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
A0A6J1G7T2 uncharacterized protein LOC1114516577.3e-6979.79Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RE+S+TLRNLKFMQRAAQ+EEQPKKEEEVKP EN FPSS +IRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLN EVASLGQ E P  SSGNHS N
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSRENGSSRNE   SN DEKNCE  GDLKRKQ + VSE R+PTKFPKSGRD QQSSFNN K  FKKPKGE L WNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
A0A6J1JFF6 uncharacterized protein LOC111484532 isoform X27.6e-6677.66Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNE-VASLGQEEIPGSSSGNHSGN
        MA RELS+TLRNLKFMQRA QREE PKKEEEVK  ENFFPSST+IRKCVVLVEGD HPG   GRMSFQ FNPSID+LNE VASL Q EIPGSS GNH GN
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNE-VASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSR+NGSS+NE  CSN DEKNCE   DLKRKQ   VS+ R+PTKFP+SGRD QQSSF++ K   KKPKGEKL WNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
A0A6J1L4S0 uncharacterized protein LOC1114998872.8e-6879.79Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN
        MA RE+S+TLRNLKFMQRAAQ+EEQPKKEEEVKP EN FPSS +IRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLN EVASLGQ E   SSSGNHS N
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLN-EVASLGQEEIPGSSSGNHSGN

Query:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
         SSRENGSSRNE   SN DEKNCE  GDLKRKQ + VSE R+PTKFPKSGRD QQSSFNN K  FKKPKGE L WNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59460.1 scarecrow-like transcription factor 11 (SCL11)5.8e-2649.46Show/hide
Query:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEVASLGQEEIPGSSSGNHSGNR
        MA RE+SSTLRNLKFMQR++ + E+ K +EE +P  +F    T+ +KCVV+ + DP PG   GRMSFQ FNPSI+KL+E A  G    P SSS N  G +
Subjt:  MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEVASLGQEEIPGSSSGNHSGNR

Query:  SSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERN-PTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNK
        S  E  SS+         E + E  GDLKRKQ + VSEE+N P K P+S  DK   S N     FKKPK +K+ W+VLRP K   K
Subjt:  SSRENGSSRNEEECSNIDEKNCENYGDLKRKQPQEVSEERN-PTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCGCGAGCTTTCCAGTACGTTGAGAAACTTGAAGTTTATGCAAAGGGCGGCTCAGAGAGAGGAACAGCCGAAGAAAGAGGAAGAAGTGAAACCTGTTGAGAA
TTTCTTTCCTTCGAGTACTATGATCAGAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGGTCCAGGTCGAATGTCATTTCAAGGCTTTAATCCTTCAATTG
ATAAACTCAATGAAGTAGCTAGCTTAGGCCAGGAAGAAATTCCTGGCTCATCATCTGGGAATCACAGTGGAAACCGTTCATCAAGAGAAAATGGATCTTCACGAAATGAA
GAAGAGTGCTCAAACATTGATGAAAAAAATTGTGAGAATTATGGGGACCTTAAAAGGAAACAACCCCAAGAAGTGTCTGAAGAACGCAATCCAACTAAGTTTCCAAAAAG
TGGTCGGGACAAACAGCAGTCATCATTTAATAATGTTAAACGATTGTTCAAGAAACCAAAGGGTGAAAAGCTGAGCTGGAATGTCCTTAGGCCCTCTAAGACTCCAAATA
AGAGTGGATAA
mRNA sequenceShow/hide mRNA sequence
GACCCTCCTGGAAACCCTCATCCTCCGCCGGTAGGCGCAGATTCAAGGTTGCGTGCGCTCGTGAACGCGAAAGCGAACGGCGCAGAAAATAGAGTTCTTTGTTGCAGGTT
TTCTTTGCCCTAGCTATTATGGCGACGCGCGAGCTTTCCAGTACGTTGAGAAACTTGAAGTTTATGCAAAGGGCGGCTCAGAGAGAGGAACAGCCGAAGAAAGAGGAAGA
AGTGAAACCTGTTGAGAATTTCTTTCCTTCGAGTACTATGATCAGAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGGTCCAGGTCGAATGTCATTTCAAG
GCTTTAATCCTTCAATTGATAAACTCAATGAAGTAGCTAGCTTAGGCCAGGAAGAAATTCCTGGCTCATCATCTGGGAATCACAGTGGAAACCGTTCATCAAGAGAAAAT
GGATCTTCACGAAATGAAGAAGAGTGCTCAAACATTGATGAAAAAAATTGTGAGAATTATGGGGACCTTAAAAGGAAACAACCCCAAGAAGTGTCTGAAGAACGCAATCC
AACTAAGTTTCCAAAAAGTGGTCGGGACAAACAGCAGTCATCATTTAATAATGTTAAACGATTGTTCAAGAAACCAAAGGGTGAAAAGCTGAGCTGGAATGTCCTTAGGC
CCTCTAAGACTCCAAATAAGAGTGGATAACCTTGTGTAGTCTTTAGATGGGTGGAGAATCCAATTCCTATCCTCTTGGGACATTGTATTGACTTCTTGCTATATTTTGTA
GTTATGTACGACTGTTGCACATTACCTGATCAAGTAATTGAAAGTATCATTTAACGTCTGTTACACACACCTGTACTCTGATTGAGAATGAAGCTCAATCCTACGAATTT
ATTTGTTTTTAGCATGCAATAAGAGTAGCTTTTGTGATGATGGTATTTTACGAGATAGGCATGATTCATTTGACTCCTTTATTAGGT
Protein sequenceShow/hide protein sequence
MATRELSSTLRNLKFMQRAAQREEQPKKEEEVKPVENFFPSSTMIRKCVVLVEGDPHPGGPGRMSFQGFNPSIDKLNEVASLGQEEIPGSSSGNHSGNRSSRENGSSRNE
EECSNIDEKNCENYGDLKRKQPQEVSEERNPTKFPKSGRDKQQSSFNNVKRLFKKPKGEKLSWNVLRPSKTPNKSG