CuGenDBv2

Gene ID	Sed0008573
Organism	Sechium edule (Chayote v1)
Description	Retrotransposon protein
Genome location	LG04:5974359..5975385
RNA-Seq Expression	Sed0008573
Synteny	Sed0008573
Gene Ontology terms	NA
InterPro domains	IPR027806 - Harbinger transposase-derived nuclease domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]

6.6e-92

59.72

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]

2.3e-92

60.07

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR HD L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]

1.2e-90

59.38

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RWKWFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYYYL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]

9.5e-91

59.03

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHIL HDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]

1.6e-90

58.16

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        M+A+FLHI+AHDVKNR+ RR F RSG TVSRHF +VL    R H+IL K+P P+  SC+  +W+WF+            + V + +R  +R+RKG ITTN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAF
        VL VC  +GEFI+V+ GWEGSA+DSRVLRDA+SR  G +VP GYYYLCDAGYPNA+GFLAPYRG+RYHL++WRG NPP+ P+E FN  HS ARN+IERAF
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAF

Query:  GALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGS--TIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMFDTAQN
        G+L  RW IL+ +SYY   +Q KIITACCLLH+LI REMGS  T     LGE D++    EM +I  INFVET+ +WT +RD++A +MF+   N
Subjt:  GALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGS--TIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMFDTAQN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TXW1 Retrotransposon protein

1.1e-92

60.07

Show/hide

Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR HD L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

A0A5A7U476 Retrotransposon protein

6.0e-91

59.38

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RWKWFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYYYL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

A0A5A7U9H2 Retrotransposon protein

4.6e-91

59.03

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHIL HDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

A0A5A7VG45 Retrotransposon protein

7.8e-91

58.16

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        M+A+FLHI+AHDVKNR+ RR F RSG TVSRHF +VL    R H+IL K+P P+  SC+  +W+WF+            + V + +R  +R+RKG ITTN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAF
        VL VC  +GEFI+V+ GWEGSA+DSRVLRDA+SR  G +VP GYYYLCDAGYPNA+GFLAPYRG+RYHL++WRG NPP+ P+E FN  HS ARN+IERAF
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAF

Query:  GALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGS--TIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMFDTAQN
        G+L  RW IL+ +SYY   +Q KIITACCLLH+LI REMGS  T     LGE D++    EM +I  INFVET+ +WT +RD++A +MF+   N
Subjt:  GALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGS--TIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMFDTAQN

A0A5D3BDX0 Retrotransposon protein

3.2e-92

59.72

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Query:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN
        MVAMFLHILAHDVKNR+++R F RSG T+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFE            + VP  +RA +R RKG + TN
Subjt:  MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFE------------LQVPVENRASFRNRKGIITTN

Query:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA
        VL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERA
Subjt:  VLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF
        FG LK RWAILR KSYYP +VQ + I ACCLLH+LI REM +    + + E D+T      DD   I+++ETS  W+ +RD++A+ MF
Subjt:  FGALKNRWAILRHKSYYPPKVQVKIITACCLLHSLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMF

SwissProt top hits

e value

%identity

Alignment

Q6AZB8 Putative nuclease HARBI1

1.8e-07

26.71

Show/hide

Query:  LQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDW--RGINP
        ++ P  + +S+ N+KG  + N   VC   G  +     W GS  D  V + +               L +    + +G+L      RY L  W    +  
Subjt:  LQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDW--RGINP

Query:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL-RHKSY--YPPKVQVKIITACCLLHSL
        P +P ++ +N AH++   I++R F A++ R+  L   K Y  Y P+    II ACC+LH++
Subjt:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL-RHKSY--YPPKVQVKIITACCLLHSL

Q9M2U3 Protein ALP1-like

9.1e-12

29.82

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Query:  AVCAPSGEFIYVLAGWEGSAADSRVLRDA--------LSRNNGFQVPHG------YYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKA
        AV  P   F+ V+AGW GS  D  VL+++          R NG ++P         Y + D+G+P     L PY+G+           P   P+  FNK 
Subjt:  AVCAPSGEFIYVLAGWEGSAADSRVLRDA--------LSRNNGFQVPHG------YYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKA

Query:  HSSARNIIERAFGALKNRWAILRHKSYYPPKVQV-KIITACCLLHSLICREMGSTIGLEILGENDATLYQE
        HS A    + A   LK+RW I+    + P + ++ +II  CCLLH++I      T+  + L +     Y++
Subjt:  HSSARNIIERAFGALKNRWAILRHKSYYPPKVQV-KIITACCLLHSLICREMGSTIGLEILGENDATLYQE

Arabidopsis top hits

e value

%identity

Alignment

AT1G43722.1 unknown protein

2.8e-24

35.29

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Query:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTV--VIRCHDI-------LYKKPKPIQPSCTDSR-WKWFE------------LQVPVENRASFR
        VAMFL I  H+   R V   F R+  TV R F+ VLT   ++ C  I       LY+ P+ +Q    D R W +F             ++V  + +  + 
Subjt:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTV--VIRCHDI-------LYKKPKPIQPSCTDSR-WKWFE------------LQVPVENRASFR

Query:  NRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHG-YYYLCDAGYPNADGFLAPYRGE-----RYHLSDWRGINPPRNPREFF
        NR    + N++A+C     F Y+  G  GS  D+ VL+ A   ++ F +P    YYL D+GYPN  G LAPYR       RYH+S +     PRN  E F
Subjt:  NRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHG-YYYLCDAGYPNADGFLAPYRGE-----RYHLSDWRGINPPRNPREFF

Query:  NKAHSSARNIIERAFGALKNR
        N+ H+S R++IER F   KN+
Subjt:  NKAHSSARNIIERAFGALKNR

AT5G28730.1 unknown protein

1.7e-13

34.59

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Query:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIY
        VA+FL I A +   R +   F  +  T+ R F  VL  + R   + Y +P+ ++     S      LQ          +  GI + NVLA+C     F Y
Subjt:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIY

Query:  VLAGWEGSAADSRVLRDALSRNNGFQV-PHGYYYLCDAGYPNADGFLAPYRGERYHLSD
           G  GS  D+RVL  A+S +  F V P   YYL D+GY N  G+LAPYR E     D
Subjt:  VLAGWEGSAADSRVLRDALSRNNGFQV-PHGYYYLCDAGYPNADGFLAPYRGERYHLSD

AT5G28950.1 unknown protein

3.2e-12

46.07

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Query:  SFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP---HGYYYLCDAGYPNADGFLAPYRGERYHLSDWR
        SFRNRKG I+ N+LA C    EF+YVL+GWEGSA DS+VL DAL+RN N   VP        + +    N D  L     +R + + WR
Subjt:  SFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP---HGYYYLCDAGYPNADGFLAPYRGERYHLSDWR

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

3.0e-26

37.76

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Query:  FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERAFGALKNRWAI
        FIYVL+GWEGSA DSRVL DAL +          +YL D G+ N   FLAP+RG RYHL ++ G    P  P E FN  H S RN+IER FG  K+R+AI
Subjt:  FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-INPPRNPREFFNKAHSSARNIIERAFGALKNRWAI

Query:  LRHKSYYPPKVQVKIITACCLLHSLI---CREMGSTIGLEILGENDA------TLYQEEMDDIPTINFV----ETSPLWTPFRDSMAQRMFDTAQN
         +    +  K Q  ++  C  LH+ +   CR   +    E+  E D        +   E+D+   +       E + +W   R SMA+ M+  A N
Subjt:  LRHKSYYPPKVQVKIITACCLLHSLI---CREMGSTIGLEILGENDA------TLYQEEMDDIPTINFV----ETSPLWTPFRDSMAQRMFDTAQN

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

4.0e-39

38.79

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Query:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILY---------KKPKPIQPSCTDSRWKW-FELQVPVENRASFRNRKGIITTNVLA
        +A+FL I+ H+++ R V+ +F  SG T+SRHF +VL  VI      +         +   P    C      +   + V V+ +  FRN  G++T NVLA
Subjt:  VAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILY---------KKPKPIQPSCTDSRWKW-FELQVPVENRASFRNRKGIITTNVLA

Query:  VCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAFGAL
          +    F YVLAGWEGSA+D +VL  AL+R N  QVP G YY+ D  YPN  GF+APY G           N     +E FN+ H      I R FGAL
Subjt:  VCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAFGAL

Query:  KNRWAILRHKSYYPPKVQVKIITACCLLHSLI
        K R+ IL     YP + QVK++ A C LH+ +
Subjt:  KNRWAILRHKSYYPPKVQVKIITACCLLHSLI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAGCCATGTTTCTACATATCTTGGCTCATGATGTTAAGAACCGTATAGTTCGAAGAATATTTACAAGATCAGGCGGAACAGTGTCGCGACACTTTCAATCTGTCCT
TACTGTTGTTATTCGTTGTCATGACATTTTGTACAAGAAACCTAAACCTATCCAACCATCATGCACCGATAGTAGATGGAAGTGGTTTGAGTTACAAGTCCCAGTTGAAA
ATCGTGCCTCCTTTAGAAATAGGAAGGGTATCATCACAACGAATGTTCTTGCTGTATGCGCTCCAAGCGGAGAGTTCATATATGTACTAGCTGGGTGGGAGGGATCAGCA
GCTGACTCTAGAGTTCTTAGGGATGCTTTATCCCGTAACAATGGATTTCAAGTCCCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCCT
AGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTATCAATCCACCACGAAATCCAAGAGAGTTTTTTAATAAGGCACACTCCTCAGCACGAAATATAA
TAGAAAGAGCGTTCGGTGCATTAAAAAATCGTTGGGCTATTCTGCGACACAAGTCTTACTATCCTCCAAAAGTGCAAGTGAAGATCATAACAGCTTGTTGTCTCCTACAT
AGTTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAGAACGATGCTACACTATACCAAGAGGAAATGGACGATATCCCAACGATTAATTTCGT
CGAGACATCGCCTCTTTGGACTCCATTTCGAGATTCCATGGCTCAAAGAATGTTTGACACAGCCCAAAACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVAMFLHILAHDVKNRIVRRIFTRSGGTVSRHFQSVLTVVIRCHDILYKKPKPIQPSCTDSRWKWFELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSA
ADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGINPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCLLH
SLICREMGSTIGLEILGENDATLYQEEMDDIPTINFVETSPLWTPFRDSMAQRMFDTAQN

Sed0008573 (gene) of Chayote v1 genome