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Sed0008588 (gene) of Chayote v1 genome

Gene IDSed0008588
OrganismSechium edule (Chayote v1)
Description60S acidic ribosomal protein P2-like
Genome locationLG07:37748816..37751146
RNA-Seq ExpressionSed0008588
SyntenySed0008588
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3958884.1 hypothetical protein CMV_016251 [Castanea mollissima]5.3e-4084.35Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK++AAYLLAVLGGN+SPS+++LKDILGSVGAE D+D+I  LL  VKG DITELIASGREKLASVPSGGGGAVAVAA  GGGG A APAAAEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]1.1e-4088.7Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGN+SPS+KDLKDILGSVGAE DED+I  L+ SVKG DITELIASGREKLASVPSGGG AVAV AAAGGGGGA APAAAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022984367.1 60S acidic ribosomal protein P2-4-like [Cucurbita maxima]2.4e-4087.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGN+SPS+KDLKDILGSVGAE DED+I  L+ SVKG DITELIASGREKLASVPSGGG AVAV AA+GGGGGA APAAAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_030966404.1 60S acidic ribosomal protein P2-1-like [Quercus lobata]5.3e-4084.35Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK++AAYLLAVLGGN+SPS+++LKDILGSVGAE D+D+I  LL  VKG DITELIASGREKLASVPSGGGGAVAVAA  GGGG A APAAAEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_038891319.1 60S acidic ribosomal protein P2-2-like [Benincasa hispida]2.2e-4186.96Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGNSSPS+KDLKDILGSVGAE DE+RI  LL +VKG D+TELIASGREKLASVPSGGG  VA AA  GGGGGADAPAAAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KRE0 Uncharacterized protein5.8e-4087.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGNS+PS+KDLKDILGSVGAE DE+RI  LL +VKG DITELIASGREKLASVPSGGG AVAV AA GGGGGA APA AEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A1S3BFW0 60S acidic ribosomal protein P2-4-like7.5e-4086.96Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGN+SPS+KDLKDILGSVGAE DE+RI  LL +VKG D+TELIASGREKLASVPSGGG AVAV AA GGGGGA APA AEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like5.2e-4188.7Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGN+SPS+KDLKDILGSVGAE DED+I  L+ SVKG DITELIASGREKLASVPSGGG AVAV AAAGGGGGA APAAAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like1.2e-4087.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MKIVAAYLLAVLGGN+SPS+KDLKDILGSVGAE DED+I  L+ SVKG DITELIASGREKLASVPSGGG AVAV AA+GGGGGA APAAAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A7N2LHF2 Uncharacterized protein2.6e-4084.35Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK++AAYLLAVLGGN+SPS+++LKDILGSVGAE D+D+I  LL  VKG DITELIASGREKLASVPSGGGGAVAVAA  GGGG A APAAAEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B1.4e-3069.57Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK++AAYLLAVLGGN+SP++ D+K IL SVGAE DE+++ FLL  +K  DITE+IA+GRE+L+SVPSGGG     A AA  GGGA AP A EAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESD+DMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P41099 60S acidic ribosomal protein P24.3e-3272.65Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAA--EAKKEEK
        MK++AA+LLA+LGGN+SP+ +DLK IL SVGA+ D+D+I  LL  VKG DITELIASGRE+LASVPSGGG  VAVAAAAGGGGG DAPAAA  E KKEEK
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAA--EAKKEEK

Query:  VEEKEESDDDMGFSLFD
         E  EESD+++GFSLFD
Subjt:  VEEKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A1.1e-3073.91Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK VAAYLLAVL GN+SPS+ DL  IL SVG E D +++  LL  + G DITELIA+GREK ASVP GGGG VAVAAAA   GGA AP AAEAKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-11.6e-3471.3Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAA+LLAVL G +SP++ D+KDILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG     AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-27.0e-3572.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAAYLLAVL G +SP+S D+K ILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG    +AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family5.0e-3672.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAAYLLAVL G +SP+S D+K ILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG    +AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family5.0e-3672.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAAYLLAVL G +SP+S D+K ILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG    +AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family5.0e-3672.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAAYLLAVL G +SP+S D+K ILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG    +AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family1.1e-3571.3Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE
        MK+VAA+LLAVL G +SP++ D+KDILGSVGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG     AAE+KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.3 60S acidic ribosomal protein family5.2e-3364.57Show/hide
Query:  MKIVAAYLLAVLGGNSSPSSKDLKDILGS------------VGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAP
        MK+VAA+LLAVL G +SP++ D+KDILGS            VGAET++ +I  LL  VKG D+ ELIA+GREKLASVPSGGGG VAVA+A  GGGG    
Subjt:  MKIVAAYLLAVLGGNSSPSSKDLKDILGS------------VGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAP

Query:  AAAEAKKEEKVEEKEESDDDMGFSLFD
         AAE+KKEEK EEKEESDDDMGFSLF+
Subjt:  AAAEAKKEEKVEEKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTAGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAATTCCTCCCCTTCTTCCAAAGATTTGAAGGATATTCTTGGATCTGTTGGAGCCGAAACTGACGAAGA
TAGGATCGCGTTTCTGTTGTGCAGTGTTAAGGGCCATGATATTACAGAGCTTATTGCATCCGGAAGAGAGAAGCTAGCATCTGTTCCTTCGGGTGGGGGTGGCGCCGTTG
CAGTTGCTGCTGCTGCAGGTGGTGGCGGTGGTGCTGATGCCCCAGCTGCCGCAGAGGCGAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGATATGGGC
TTCAGTCTTTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
CTCCAATTTCAGAACCCTAATTTTTCTCGTTCTCTCTGCGATTTGCTATCTGTGAAGGATGAAGATCGTAGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAATTCCTCCC
CTTCTTCCAAAGATTTGAAGGATATTCTTGGATCTGTTGGAGCCGAAACTGACGAAGATAGGATCGCGTTTCTGTTGTGCAGTGTTAAGGGCCATGATATTACAGAGCTT
ATTGCATCCGGAAGAGAGAAGCTAGCATCTGTTCCTTCGGGTGGGGGTGGCGCCGTTGCAGTTGCTGCTGCTGCAGGTGGTGGCGGTGGTGCTGATGCCCCAGCTGCCGC
AGAGGCGAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGATATGGGCTTCAGTCTTTTCGATTAAGTTTAATGCAATGTTGAAGGTTGTTTAGAGATTT
TTCGAGTTTTAGATTGGAATTTTTGTTTTTCACATGTAACCCTTTTAACATTATCGTTGTGGTATGATGATGGGCCAAATGCTATATTTCTTTTCAGTTAATGAATTTCT
TATCAGTTTTGGATGCTCTATGAAATCTGATATATTATATTGATATAGGAATTGCCACTATATTATCACTA
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNSSPSSKDLKDILGSVGAETDEDRIAFLLCSVKGHDITELIASGREKLASVPSGGGGAVAVAAAAGGGGGADAPAAAEAKKEEKVEEKEESDDDMG
FSLFD