CuGenDBv2

Gene ID	Sed0008619
Organism	Sechium edule (Chayote v1)
Description	pre-mRNA-splicing factor ISY1 homolog
Genome location	LG07:5412542..5414518
RNA-Seq Expression	Sed0008619
Synteny	Sed0008619
Gene Ontology terms	GO:0000350 - generation of catalytic spliceosome for second transesterification step (biological process) GO:0000389 - mRNA 3'-splice site recognition (biological process) GO:0000974 - Prp19 complex (cellular component) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0071014 - post-mRNA release spliceosomal complex (cellular component) GO:0071020 - post-spliceosomal complex (cellular component)
InterPro domains	IPR009360 - Pre-mRNA-splicing factor Isy1 IPR029012 - Helix hairpin bin domain superfamily IPR037200 - Pre-mRNA-splicing factor Isy1 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008461190.1 PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis melo]

5.4e-156

97.69

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRIIELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_011659495.1 pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]

1.2e-155

97.36

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRIIELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_022152151.1 pre-mRNA-splicing factor ISY1 homolog [Momordica charantia]

2.2e-154

96.04

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+R EAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_022960451.1 pre-mRNA-splicing factor ISY1 homolog [Cucurbita moschata]

2.2e-154

96.37

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        +K+SAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEERIRAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAK+MLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_023004198.1 pre-mRNA-splicing factor ISY1 homolog [Cucurbita maxima]

7.7e-155

96.7

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TK+SAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEERIRAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAK+MLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBN6 Uncharacterized protein

5.8e-156

97.36

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRIIELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A1S3CE48 pre-mRNA-splicing factor ISY1 homolog

2.6e-156

97.69

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRIIELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A5D3CH05 Pre-mRNA-splicing factor ISY1-like protein

2.6e-156

97.69

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRIIELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A6J1DGR8 pre-mRNA-splicing factor ISY1 homolog

1.1e-154

96.04

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEER+R EAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A6J1KYR8 pre-mRNA-splicing factor ISY1 homolog

3.7e-155

96.7

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREK HWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        TK+SAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVL++VEGPSEERIRAEAVEEWQRME
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        EIR EAKRAVKSGEVASVVN AAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAK+MLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        IQR
Subjt:  IQR

SwissProt top hits

e value

%identity

Alignment

Q20716 Protein isy-1

8.9e-45

41.9

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARN EKA + L R+  +K EE++ P  RRP+   +CR+L++A+++R++I+R+  +K+  IQN GLGE +LRDLNDE+N+LI+ K  WE+RI ELGG +Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPE-LRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRM
         K++ K  D  G        +G   GY+YFGAAK LPGV+ELFEK  E   +RR R D+ + IDA Y+GY DDEDG L     P E+ I  + +E     
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPE-LRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRM

Query:  EEIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKY
           RI  + A K  +     + AA E +++ EE+  +++ + +       D     + HV LP +++IE+M+LE+KK EL++KY
Subjt:  EEIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKY

Q54N41 Pre-mRNA-splicing factor ISY1 homolog

2.7e-54

43.79

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKA+SMLNR++ LK  E K+ +ERRPYL++EC  L +A+KWR+QI++EI R + EIQN  L E+++RDLND INKL+REK HWERRI++LGGPN+
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEW-
           + K+ D +G       P G G  YRY+G AK LPGV ELFEKP +     +++TR D+YK ID+ YYGYRDDEDG L+++E   E+    + VE W 
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEW-

Query:  -QRMEEIRIEAKR----AVKSGEVASVVNAAAKEVLFEEEEEVVEEERKRER------EMKENLDKERE-----FVVHVPLPDEKEIEKMVLEKKKMELL
         Q+ ++ +I   R     +K+    +       E+  +++EE  +             E  EN+ +E E     F  +V LP   +IE ++LEK+K EL 
Subjt:  -QRMEEIRIEAKR----AVKSGEVASVVNAAAKEVLFEEEEEVVEEERKRER------EMKENLDKERE-----FVVHVPLPDEKEIEKMVLEKKKMELL

Query:  SKYASD
         +Y  +
Subjt:  SKYASD

Q69ZQ2 Pre-mRNA-splicing factor ISY1 homolog

5.0e-64

51.48

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
         K   KM D EG  V    P  R  GY+YFGAAK LPGV+ELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+++RAE VE+W+   
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSE
        E R+        GE         KE   EEEEE     V EEE   E  + K   D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  E
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSE

Query:  AKSML
        AK +L
Subjt:  AKSML

Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog

6.5e-64

51.48

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
         K   KM D EG  V    P  R  GY+YFGAAK LPGV+ELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+R+RAE VE+W+   
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSE
        E R+   R  K  E              EEEEE     V EEE   E  + K   D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  E
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSE

Query:  AKSML
        AK +L
Subjt:  AKSML

Q9ULR0 Pre-mRNA-splicing factor ISY1 homolog

1.1e-63

49.83

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
         K   KM D EG  V    P  R  GY+YFGAAK LPGV+ELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+++RAE VE+W+   
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSML
        E R+      +  E    +N      ++   EE  +EE  +E   K   D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  EA+ +L
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSML

Arabidopsis top hits

e value

%identity

Alignment

AT3G18790.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink).

3.5e-129

79.87

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY
        MARNEEKAQSMLNRFI  K  EKKKPKERRPYLASECRDLAEADKWRQQI+REIG KVAEIQNEGLGEHRLRDLNDEINKL+RE+ HWERRI+ELGG NY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNY

Query:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME
        +KHSAKMTDLEGNI+DVPNPSGRGPGYRYFGAAKKLPGV+ELFEKPPELRKR+TRYDIYKRIDASYYGYRDDEDG+L+K+E  SE  +R  +VEEW+R++
Subjt:  TKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRME

Query:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN
        E+R EA++            AAA+EVLFEEEE+VVEEER  ERE +E  +KEREFVVHVPLPDEKEIEKMVLEKKKM+LLSKYAS+ L+E+Q+EAKSMLN
Subjt:  EIRIEAKRAVKSGEVASVVNAAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN

Query:  IQR
        I R
Subjt:  IQR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTCGCAATGAGGAGAAGGCCCAGTCAATGCTGAATCGTTTCATAGCCTTAAAAGCTGAGGAGAAGAAGAAACCCAAGGAACGAAGGCCCTACCTTGCCTCCGAGTG
TCGTGACCTTGCTGAAGCTGACAAATGGCGCCAACAAATCATGCGTGAGATTGGTCGTAAGGTCGCAGAGATCCAAAATGAAGGCCTCGGCGAGCATCGTTTGCGTGATC
TCAATGACGAGATTAACAAGCTTATTAGAGAGAAGTTACATTGGGAGCGTCGCATAATTGAGCTAGGTGGCCCTAATTATACCAAGCACTCAGCCAAAATGACTGATTTG
GAAGGGAATATCGTCGATGTACCGAACCCCAGTGGTCGGGGTCCAGGATATCGGTACTTTGGTGCTGCAAAAAAGTTACCAGGTGTAAAGGAGTTGTTTGAGAAGCCTCC
TGAGCTGAGAAAGCGTAGGACTCGTTACGACATATACAAGAGGATAGATGCAAGCTACTACGGGTACAGGGATGACGAAGATGGGGTTTTGGATAAAGTGGAAGGTCCAA
GTGAAGAGCGGATTAGAGCGGAGGCAGTCGAGGAGTGGCAGAGAATGGAAGAGATAAGGATAGAAGCAAAGAGGGCAGTGAAGAGTGGTGAGGTAGCAAGTGTTGTGAAT
GCTGCAGCAAAGGAAGTGCTGTTTGAAGAGGAGGAAGAGGTTGTGGAAGAAGAGAGGAAGAGAGAGAGGGAAATGAAGGAGAATTTGGACAAGGAAAGAGAGTTTGTGGT
GCATGTGCCATTGCCTGATGAAAAGGAGATTGAGAAGATGGTATTGGAGAAGAAGAAGATGGAACTGTTGAGTAAGTATGCAAGTGACATGCTGTTGGAGGAGCAGAGTG
AAGCCAAGTCCATGCTCAATATACAGAGGTAA

mRNA sequence

Show/hide mRNA sequence

GGAAAACAAAAAACCCTAACTTCTGTGCACAGACGCCCCATTCTCACACACTCTTTCCCAGTCTCTTCATCTCTTTCATAGAACGAATTCTATTTTCTGTGCTATTCATC
TTCGCCGACTCTTTCTTAGATAGTAAAAAAGATTTTTAGTGTAGGATAAGATGGCTCGCAATGAGGAGAAGGCCCAGTCAATGCTGAATCGTTTCATAGCCTTAAAAGCT
GAGGAGAAGAAGAAACCCAAGGAACGAAGGCCCTACCTTGCCTCCGAGTGTCGTGACCTTGCTGAAGCTGACAAATGGCGCCAACAAATCATGCGTGAGATTGGTCGTAA
GGTCGCAGAGATCCAAAATGAAGGCCTCGGCGAGCATCGTTTGCGTGATCTCAATGACGAGATTAACAAGCTTATTAGAGAGAAGTTACATTGGGAGCGTCGCATAATTG
AGCTAGGTGGCCCTAATTATACCAAGCACTCAGCCAAAATGACTGATTTGGAAGGGAATATCGTCGATGTACCGAACCCCAGTGGTCGGGGTCCAGGATATCGGTACTTT
GGTGCTGCAAAAAAGTTACCAGGTGTAAAGGAGTTGTTTGAGAAGCCTCCTGAGCTGAGAAAGCGTAGGACTCGTTACGACATATACAAGAGGATAGATGCAAGCTACTA
CGGGTACAGGGATGACGAAGATGGGGTTTTGGATAAAGTGGAAGGTCCAAGTGAAGAGCGGATTAGAGCGGAGGCAGTCGAGGAGTGGCAGAGAATGGAAGAGATAAGGA
TAGAAGCAAAGAGGGCAGTGAAGAGTGGTGAGGTAGCAAGTGTTGTGAATGCTGCAGCAAAGGAAGTGCTGTTTGAAGAGGAGGAAGAGGTTGTGGAAGAAGAGAGGAAG
AGAGAGAGGGAAATGAAGGAGAATTTGGACAAGGAAAGAGAGTTTGTGGTGCATGTGCCATTGCCTGATGAAAAGGAGATTGAGAAGATGGTATTGGAGAAGAAGAAGAT
GGAACTGTTGAGTAAGTATGCAAGTGACATGCTGTTGGAGGAGCAGAGTGAAGCCAAGTCCATGCTCAATATACAGAGGTAAGATTAGACAGACATGTTATGTTTGTACT
TAGTGTCCCTAATTGTAATAGATTTGGTTAATATGTTTTTCATACTTCAATTTTCCACCCATCACTGAAAATGTAGTTGCCTAATGAATTTGATTTATGCATTGATTTCT
TGCTTGTGGTCGACTGGTGGCTAATCATATTTTGGATCCAATCAGAGTGACAACAATGTTCGAGAGTTATGTTATATGATGAAATACTGATTTGATGTCTGTTGAGATAT
CTGTATAATTTTGTTATGAGCGCATCTCTTAGACAATCAATGCTGATCTGATGAATGATATAAACCTTAGATATGTGGTTTCTAAGAGTTTCCA

Protein sequence

Show/hide protein sequence

MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKLHWERRIIELGGPNYTKHSAKMTDL
EGNIVDVPNPSGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLDKVEGPSEERIRAEAVEEWQRMEEIRIEAKRAVKSGEVASVVN
AAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLNIQR

Sed0008619 (gene) of Chayote v1 genome