; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008635 (gene) of Chayote v1 genome

Gene IDSed0008635
OrganismSechium edule (Chayote v1)
DescriptionRibonucloprotein
Genome locationLG08:35393296..35395579
RNA-Seq ExpressionSed0008635
SyntenySed0008635
Gene Ontology termsGO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0031118 - rRNA pseudouridine synthesis (biological process)
GO:0031120 - snRNA pseudouridine synthesis (biological process)
GO:0031429 - box H/ACA snoRNP complex (cellular component)
GO:0034513 - box H/ACA snoRNA binding (molecular function)
InterPro domainsIPR002415 - H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 - Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454886.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Cucumis melo]1.4e-7595.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS QKDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS+LF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

XP_022955313.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita moschata]8.4e-7695.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKAEFDQVV+EVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

XP_022994544.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita maxima]4.2e-7595.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M SDSEAEKS  KDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

XP_023541121.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita pepo subsp. pepo]4.9e-7696.23Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

XP_038894923.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Benincasa hispida]1.2e-7494.34Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS QKDK+KEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKA+++QVVAEVSELTS+LF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

TrEMBL top hitse value%identityAlignment
A0A0A0LVP3 Ribonucloprotein9.3e-7393.71Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKE KK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS+LF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

A0A1S3C0C8 Ribonucloprotein6.9e-7695.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS QKDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS+LF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

A0A5D3BKS6 Ribonucloprotein6.9e-7695.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS QKDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS+LF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

A0A6J1GTK9 Ribonucloprotein4.0e-7695.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKAEFDQVV+EVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

A0A6J1K350 Ribonucloprotein2.0e-7595.6Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M SDSEAEKS  KDKEKEKKK++ALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF

SwissProt top hitse value%identityAlignment
P32495 H/ACA ribonucleoprotein complex subunit NHP28.2e-3448.72Show/hide
Query:  MGSDSEAEKSIQKDK--EKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIR
        MG D++  K  ++ K  +  + +M A+ P AKPLA KKL K+ LK V+KA++ K +KRGVKEVVK++R+G+KG  VIAG+ISP DVI+H+P+LCE+  + 
Subjt:  MGSDSEAEKSIQKDK--EKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIR

Query:  YVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL
        Y+++PSK+DL  AG+TKRPT  V +    NK + G  ++E+ K  F++VV EV  L
Subjt:  YVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL

Q6P8C4 H/ACA ribonucleoprotein complex subunit 2-like protein2.2e-2347.5Show/hide
Query:  EAEKSIQKDKEKEKKKMMA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPS
        E  + + +   K   +++A L PIAKPLAG+KL K+  K V+KA + K ++RGVKEV K I +G+KG  V+AG+  PI+V  H+P++CE+  I Y YVPS
Subjt:  EAEKSIQKDKEKEKKKMMA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPS

Query:  KEDLANAGSTKRPTCCVLVQ
        K DL  A  +KRPTC +L++
Subjt:  KEDLANAGSTKRPTCCVLVQ

Q8I7X7 H/ACA ribonucleoprotein complex subunit 2-like protein2.2e-2339.35Show/hide
Query:  DSEAEKSIQKDKEKEKKKMMALA----PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRY
        + E  +    +KE  ++    LA    PIA PLA +KL KR  K V+KA++ K +++G+++V K I++G++G  +IAG+ +PI+V  H+P++CE+A I Y
Subjt:  DSEAEKSIQKDKEKEKKKMMALA----PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRY

Query:  VYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL
         YVP+K+DL  A  +KRPTCCVL+  KPN         E  ++ +D+ + +V+ L
Subjt:  VYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL

Q9LEY9 H/ACA ribonucleoprotein complex subunit 2-like protein2.2e-5572.78Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKSIQK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL
        YVPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL

Q9P7H0 H/ACA ribonucleoprotein complex subunit nhp24.0e-2842.86Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M  D +  K     +++    + AL PIAKPLA KKL K+ +K V+KA++ K + RGVKEVVK++R+G+KG  ++AG+ISP+DVI+H+P+LCE+ ++ Y+
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL
        Y  SKE L  A +TKRPT CV++     K ++   E+   K  +++++ EV  L
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSEL

Arabidopsis top hitse value%identityAlignment
AT4G12600.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein5.7e-1433.59Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKAEFDQVVAEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVAEVSEL

AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein9.7e-1432.81Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    + LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKAEFDQVVAEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVAEVSEL

AT5G08180.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.6e-5672.78Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKSIQK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL
        YVPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL

AT5G08180.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.6e-5672.78Show/hide
Query:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKSIQK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL
        YVPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSL

AT5G20160.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein5.7e-1433.59Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKAEFDQVVAEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVAEVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGTGATAGCGAGGCAGAGAAATCGATTCAAAAGGACAAAGAAAAGGAGAAGAAGAAGATGATGGCTCTTGCACCTATTGCTAAACCCCTTGCCGGCAAGAAGCT
CTGTAAGCGCACCCTCAAGCTCGTTCGCAAAGCTGCTGAGTACAAGTGCTTGAAGCGTGGAGTAAAGGAGGTGGTCAAAAGCATAAGGCGCGGACAAAAAGGATTTTGTG
TGATTGCTGGTAACATATCCCCAATTGACGTGATCACTCATGTTCCGATCTTATGTGAAGAAGCAGACATCCGCTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAAT
GCGGGGTCGACCAAGAGGCCAACATGTTGTGTGCTGGTACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAAGCTGAATTTGACCAAGT
TGTAGCAGAAGTATCAGAACTTACAAGTAGTCTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
TACAGTTTCCTCTTAAACCCTAGAAGACGAGAAGTCAAAAACCCGGGCAGACAGAAATCTCCGTCGCCGTCGCAAACCCCATTTTTTCCGGCAGCAATGGGGAGTGATAG
CGAGGCAGAGAAATCGATTCAAAAGGACAAAGAAAAGGAGAAGAAGAAGATGATGGCTCTTGCACCTATTGCTAAACCCCTTGCCGGCAAGAAGCTCTGTAAGCGCACCC
TCAAGCTCGTTCGCAAAGCTGCTGAGTACAAGTGCTTGAAGCGTGGAGTAAAGGAGGTGGTCAAAAGCATAAGGCGCGGACAAAAAGGATTTTGTGTGATTGCTGGTAAC
ATATCCCCAATTGACGTGATCACTCATGTTCCGATCTTATGTGAAGAAGCAGACATCCGCTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAATGCGGGGTCGACCAA
GAGGCCAACATGTTGTGTGCTGGTACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAAGCTGAATTTGACCAAGTTGTAGCAGAAGTAT
CAGAACTTACAAGTAGTCTTTTCTGAAGGGTAAAAATCCATTGTTCTTTAGATTTCTTCCCTTCTTTCTGCAAATGTATTTTTACCAATTTCTAGTGCAGTCATCGCTCT
TAATATTAAATATGTCATAGTGGCGTTGACATTGATATTTTCCATTAGTCAAGCTATGTTTAAAATGCTCTAAGTTACAAGAAGCTGAGTGATTCAATAGAATTTGTCGG
AATATAGTCTTATTAAGTTGTGAAATCAATCGTTTTCCACAAAATGG
Protein sequenceShow/hide protein sequence
MGSDSEAEKSIQKDKEKEKKKMMALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLAN
AGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSLF