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Sed0008648 (gene) of Chayote v1 genome

Gene IDSed0008648
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:46209385..46209741
RNA-Seq ExpressionSed0008648
SyntenySed0008648
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]2.6e-3472.27Show/hide
Query:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL
        MD NY +Y  QNSS RPLAIVLALASAV LSPLR++ET WSSGFV+PL++LGLI+AIKTSS CSS S     R+SA+  SD PS VL+IGSSSWGLA IL
Subjt:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL

Query:  VMLILGLSWQSSVKGFIWR
        +MLILGLSWQSSV+ F+WR
Subjt:  VMLILGLSWQSSVKGFIWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]3.7e-3673.95Show/hide
Query:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL
        MD NY +Y+ QNSSQRPLAI LALASAV+LSPLR++ET WSSGFV+PL++LGLIVAIKTSSSCSS S     R+SA+  SD PS VL+IGSSSWGLA IL
Subjt:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL

Query:  VMLILGLSWQSSVKGFIWR
        +MLILGLSWQSSV+ F+WR
Subjt:  VMLILGLSWQSSVKGFIWR

KAF3958642.1 hypothetical protein CMV_016470 [Castanea mollissima]5.7e-2963.33Show/hide
Query:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI
        +Y+ Q SSQR +A+VLAL SA++LSPL        R  ETKWSSGFV+P+++ GLI+AIKT+SSCSSMSA+ G R S +   DPS VLRIGSSSWGLA I
Subjt:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI

Query:  LVMLILGLSWQSSVKGFIWR
        LVML+L LSWQ SV+ F WR
Subjt:  LVMLILGLSWQSSVKGFIWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3973.73Show/hide
Query:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVILV
        MD NYG+Y+ Q SSQRPLAIVLALASAV+LSPLR +E++WSSGFV+PL++L LI+AIKTSSSCSSMS +R +R+SA+  SDPS VL+IGSSSWGLA +L+
Subjt:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVILV

Query:  MLILGLSWQSSVKGFIWR
        MLI GLSWQSSVK F+WR
Subjt:  MLILGLSWQSSVKGFIWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]2.8e-2863.33Show/hide
Query:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI
        +Y+ Q SSQR +A+VLAL SA++LSPL        R +ETKWSSGFV+P+++ GLI+AIKT+SSCSSMSA+ G R S +   DPS VLRIGSSSWGLA I
Subjt:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI

Query:  LVMLILGLSWQSSVKGFIWR
        LVML+L LSWQ SV+ F WR
Subjt:  LVMLILGLSWQSSVKGFIWR

TrEMBL top hitse value%identityAlignment
A0A0A0LEN3 Uncharacterized protein1.8e-3673.95Show/hide
Query:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL
        MD NY +Y+ QNSSQRPLAI LALASAV+LSPLR++ET WSSGFV+PL++LGLIVAIKTSSSCSS S     R+SA+  SD PS VL+IGSSSWGLA IL
Subjt:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL

Query:  VMLILGLSWQSSVKGFIWR
        +MLILGLSWQSSV+ F+WR
Subjt:  VMLILGLSWQSSVKGFIWR

A0A2N9IBH6 Uncharacterized protein8.0e-2960.83Show/hide
Query:  SYSKQNSSQRPLAIVLALASAVLLSPLRT--------FETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI
        +Y+ Q SSQR +A+VL+L SA++LSPL          +ETKWSSGFV+P++++GLI+AI+T+SSCSSMSA+ G R S +   DPS VLRIGSSSWGLA I
Subjt:  SYSKQNSSQRPLAIVLALASAVLLSPLRT--------FETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI

Query:  LVMLILGLSWQSSVKGFIWR
        LVML+L LSWQ+SV+ F WR
Subjt:  LVMLILGLSWQSSVKGFIWR

A0A5A7UY99 Putative transmembrane protein1.3e-3472.27Show/hide
Query:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL
        MD NY +Y  QNSS RPLAIVLALASAV LSPLR++ET WSSGFV+PL++LGLI+AIKTSS CSS S     R+SA+  SD PS VL+IGSSSWGLA IL
Subjt:  MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSD-PSCVLRIGSSSWGLAVIL

Query:  VMLILGLSWQSSVKGFIWR
        +MLILGLSWQSSV+ F+WR
Subjt:  VMLILGLSWQSSVKGFIWR

A0A6N2MX54 Uncharacterized protein2.0e-2765.79Show/hide
Query:  SKQNSSQRPLAIVLALASAVLLSPL----RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVILVMLIL
        + QNSSQR LA+VLALASAV+LSPL    RT ETKWSSGFV+P+++ GL++AI+T+S  SSMS  RG R S +   DPS VLRIGSSSWGLA +LVML L
Subjt:  SKQNSSQRPLAIVLALASAVLLSPL----RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVILVMLIL

Query:  GLSWQSSVKGFIWR
         LSWQ SV+ F WR
Subjt:  GLSWQSSVKGFIWR

A0A7N2LMQ6 Uncharacterized protein1.4e-2863.33Show/hide
Query:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI
        +Y+ Q SSQR +A+VLAL SA++LSPL        R +ETKWSSGFV+P+++ GLI+AIKT+SSCSSMSA+ G R S +   DPS VLRIGSSSWGLA I
Subjt:  SYSKQNSSQRPLAIVLALASAVLLSPL--------RTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVI

Query:  LVMLILGLSWQSSVKGFIWR
        LVML+L LSWQ SV+ F WR
Subjt:  LVMLILGLSWQSSVKGFIWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTAACTATGGATCTTACTCAAAACAGAACTCATCTCAGAGGCCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGTTGCTTTCTCCATTAAGAACCTTTGA
AACCAAATGGAGCTCTGGTTTTGTTATACCATTGATTATTTTGGGGCTTATAGTGGCCATTAAAACATCTTCTTCTTGCTCATCCATGTCAGCTGAGAGAGGGCAGAGAA
ATTCGGCAGTTTTCTGTTCAGATCCTTCATGTGTTCTTAGAATTGGGAGCTCCTCTTGGGGACTTGCTGTGATTTTAGTGATGTTGATTCTTGGGCTTTCTTGGCAAAGT
TCTGTTAAAGGATTTATATGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTAACTATGGATCTTACTCAAAACAGAACTCATCTCAGAGGCCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGTTGCTTTCTCCATTAAGAACCTTTGA
AACCAAATGGAGCTCTGGTTTTGTTATACCATTGATTATTTTGGGGCTTATAGTGGCCATTAAAACATCTTCTTCTTGCTCATCCATGTCAGCTGAGAGAGGGCAGAGAA
ATTCGGCAGTTTTCTGTTCAGATCCTTCATGTGTTCTTAGAATTGGGAGCTCCTCTTGGGGACTTGCTGTGATTTTAGTGATGTTGATTCTTGGGCTTTCTTGGCAAAGT
TCTGTTAAAGGATTTATATGGAGATAG
Protein sequenceShow/hide protein sequence
MDINYGSYSKQNSSQRPLAIVLALASAVLLSPLRTFETKWSSGFVIPLIILGLIVAIKTSSSCSSMSAERGQRNSAVFCSDPSCVLRIGSSSWGLAVILVMLILGLSWQS
SVKGFIWR