; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008649 (gene) of Chayote v1 genome

Gene IDSed0008649
OrganismSechium edule (Chayote v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic-like
Genome locationLG01:43336435..43339699
RNA-Seq ExpressionSed0008649
SyntenySed0008649
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602094.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-13292.59Show/hide
Query:  MVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        MV+SSGVCA H  AL REIA   QRLRPNAQF+RLFF PLPSSSVS+PARGF+T+A+FKSK KVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGKGLRSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        LFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKFVTDEEED
Subjt:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]4.4e-12586.5Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIAQRLRPN-AQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        MAAQTM+++SGVC GH   L RE++  LRPN  QF RLFF PLPS SVS+P RGF T+AVFKS+TK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMVISSGVCAGH--ALNREIAQRLRPN-AQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK
        GRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGK  RSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        ANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]8.0e-13592.73Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMV+SSGVCA H  AL REIA   QRLRPNAQF+RLFF PLPSSSVS+PARGF+T+A+FKSK KVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        TKANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]2.0e-13392Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMV+SSGVCA H  AL REIA   +RLRPNAQ +RLFF PLPSSSVS+PARGF+T+A+FKSK KVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        TKANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]8.5e-12988.19Show/hide
Query:  MAAQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTM+++SGVC GH +  +   RLRPNAQF+RLFF PLPS SVS+PARGF T+AVFKS+TK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGK  RSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        LFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein2.1e-12586.5Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIAQRLRPN-AQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        MAAQTM+++SGVC GH   L RE++  LRPN  QF RLFF PLPS SVS+P RGF T+AVFKS+TK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMVISSGVCAGH--ALNREIAQRLRPN-AQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK
        GRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGK  RSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        ANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic6.2e-12586.5Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIAQRLRP-NAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        MAAQTM+++SGVC GH   L RE++  LRP N QF RLFF PLP+ SVS+PARGF  +AVFKS+TK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMVISSGVCAGH--ALNREIAQRLRP-NAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGK  RSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        ANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

A0A5A7UZ08 Photosystem II 22 kDa protein6.2e-12586.5Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIAQRLRP-NAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        MAAQTM+++SGVC GH   L RE++  LRP N QF RLFF PLP+ SVS+PARGF  +AVFKS+TK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMVISSGVCAGH--ALNREIAQRLRP-NAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGK  RSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        ANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  ANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like3.9e-13592.73Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMV+SSGVCA H  AL REIA   QRLRPNAQF+RLFF PLPSSSVS+PARGF+T+A+FKSK KVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        TKANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like9.5e-13492Show/hide
Query:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMV+SSGVCA H  AL REIA   +RLRPNAQ +RLFF PLPSSSVS+PARGF+T+A+FKSK KVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVISSGVCAGH--ALNREIA---QRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRG+FIDDPEPATGL+RAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        TKANELFVGRLAQ+GFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic3.1e-10573.19Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLP----SSSVSVPARGF--QTVAVFKSKTKVPAKKVVKPKE--KVEDGIFGTSGGIGFTKQNE
        AQTM++++           + +RL+P    + LF   LP    SSS +  +  F   TVA+FKSK K P KKV  PKE  KVEDGIFGTSGGIGFTKQNE
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLP----SSSVSVPARGF--QTVAVFKSKTKVPAKKVVKPKE--KVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+F+DDP P TGL++AVIPPGK  +SALGL EGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        FTKANELFVGRLAQ+G AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  FTKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

Q02060 Photosystem II 22 kDa protein, chloroplastic1.0e-10880.47Show/hide
Query:  HALNREIAQRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
        +AL +   Q+++P +  + LFF+PLPSSS S  +  F+T+A+FKSK K P KKV KPK KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGEGIT
Subjt:  HALNREIAQRLRPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT

Query:  GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQVGFAFSL
        GKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGRF+D  EP TGL++AVIPPGK +RSALGLK  GPLFGFTK+NELFVGRLAQ+GFAFSL
Subjt:  GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQVGFAFSL

Query:  IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD
        IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+EE+D
Subjt:  IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEEDD

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic8.1e-10673.91Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLP----SSSVSVPARGF--QTVAVFKSKTKVPAKKVVKPKE--KVEDGIFGTSGGIGFTKQNE
        AQTM++++           + +RL+P    + LF   LP    SS+ +  +  F   TVA+FKSK K P KKV  PKE  KVEDGIFGTSGGIGFTKQNE
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLP----SSSVSVPARGF--QTVAVFKSKTKVPAKKVVKPKE--KVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGRFIDDP PATGL++AVIPPGK  +SALGL EGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        FTKANELFVGRLAQ+G AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  FTKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic2.8e-10674.91Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTP-----LPSSSVSVPAR-GFQTVAVFKSKTKVPAKKVV-KPKEKVEDGIFGTSGGIGFTKQNEL
        AQTM++++           + +RL+P    +  FF P      PS+S S  +     TVA+FKSK K PAKKVV KPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTP-----LPSSSVSVPAR-GFQTVAVFKSKTKVPAKKVV-KPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRG+FIDDP P TGLD+AVIPPGKG +SALGL EGGPLF F
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        TKANELFVGRLAQ+G AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEEE+
Subjt:  TKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

Q9XF91 Photosystem II 22 kDa protein, chloroplastic1.4e-10274.44Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        AQTM+++SGV AGH L R  +   +P      LF +   +S V++P+R   F  +A+FK KTK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRV
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+DD  P TGL++AVIPPGK +RSALGLKE GPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        LFVGRLAQ+G AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein1.0e-10374.44Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        AQTM+++SGV AGH L R  +   +P      LF +   +S V++P+R   F  +A+FK KTK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRV
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+DD  P TGL++AVIPPGK +RSALGLKE GPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED
        LFVGRLAQ+G AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  LFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEED

AT1G44575.2 Chlorophyll A-B binding family protein5.1e-6370.53Show/hide
Query:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        AQTM+++SGV AGH L R  +   +P      LF +   +S V++P+R   F  +A+FK KTK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRV
Subjt:  AQTMVISSGVCAGHALNREIAQRLRPNAQFARLFFTPLPSSSVSVPAR--GFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGG
        AMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+DD  P TGL++AVIPPGK +RSALGLKE G
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAGATGAATGGGTAATGGGCATAAATGAAAGGGTTGTTAAAGACAAAAAAGCAAAAAGAAAAACGTACAACAAAAGCCCTCCGATCACAAAAATGAAAGGACG
ACGTGTCCGTCTGTTGGCCGATCGTCAAAATCTGCACACTCACCATACACTCAAAATTTCTCAATCCTTAAAACCCAATCCCCAATCGAAGACTCCGCCAGTAACGCAAA
CGAACAGACTGAGGGATTGCATTCTATCATCCATGGCGGCCCAGACCATGGTGATTTCCTCCGGTGTGTGCGCCGGCCATGCCCTGAACAGAGAAATCGCGCAGAGGCTC
AGACCCAACGCCCAATTTGCTCGTTTGTTCTTCACTCCCCTGCCTTCCAGTTCGGTTTCTGTGCCGGCGCGTGGATTTCAGACGGTCGCGGTGTTCAAATCCAAGACCAA
AGTGCCGGCCAAGAAGGTTGTGAAGCCCAAGGAGAAGGTGGAAGACGGGATTTTCGGGACTTCCGGTGGTATTGGTTTCACCAAGCAGAATGAACTCTTTGTTGGCCGTG
TTGCTATGATCGGCTTTGCTGCGTCTTTGCTGGGAGAGGGAATTACCGGAAAGGGAATTCTAGCGCAATTGAACTTAGAAACCGGAGTTCCGATTTACGAGGCAGAGCCT
CTTCTTCTGTTCTTCATCTTATTCACTCTACTCGGAGCCATCGGAGCCTTAGGAGACCGTGGAAGATTCATCGACGATCCCGAACCGGCCACGGGACTTGACCGTGCTGT
TATCCCTCCCGGGAAGGGCCTCAGATCCGCCCTAGGTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCGAATGAACTGTTCGTGGGGAGATTGGCGCAGGTCG
GGTTTGCGTTCTCGCTGATCGGAGAAATTATAACGGGAAAGGGAGCGTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAAATCGAGCCGCTGGTTTTGCTG
AATGTTGTGTTCTTCTTCATCGCTGCTTTGAATCCTGGAACTGGTAAATTTGTCACCGATGAGGAAGAGGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTAAAAAACTAAAACAAAATTTTGTTCCCAAATTTTGATTTGGTTTGTTAAAGTAGAGAGGTAATAAGAAATATGAGAAAAGATGAATGGGTAATGGGCATAAATGA
AAGGGTTGTTAAAGACAAAAAAGCAAAAAGAAAAACGTACAACAAAAGCCCTCCGATCACAAAAATGAAAGGACGACGTGTCCGTCTGTTGGCCGATCGTCAAAATCTGC
ACACTCACCATACACTCAAAATTTCTCAATCCTTAAAACCCAATCCCCAATCGAAGACTCCGCCAGTAACGCAAACGAACAGACTGAGGGATTGCATTCTATCATCCATG
GCGGCCCAGACCATGGTGATTTCCTCCGGTGTGTGCGCCGGCCATGCCCTGAACAGAGAAATCGCGCAGAGGCTCAGACCCAACGCCCAATTTGCTCGTTTGTTCTTCAC
TCCCCTGCCTTCCAGTTCGGTTTCTGTGCCGGCGCGTGGATTTCAGACGGTCGCGGTGTTCAAATCCAAGACCAAAGTGCCGGCCAAGAAGGTTGTGAAGCCCAAGGAGA
AGGTGGAAGACGGGATTTTCGGGACTTCCGGTGGTATTGGTTTCACCAAGCAGAATGAACTCTTTGTTGGCCGTGTTGCTATGATCGGCTTTGCTGCGTCTTTGCTGGGA
GAGGGAATTACCGGAAAGGGAATTCTAGCGCAATTGAACTTAGAAACCGGAGTTCCGATTTACGAGGCAGAGCCTCTTCTTCTGTTCTTCATCTTATTCACTCTACTCGG
AGCCATCGGAGCCTTAGGAGACCGTGGAAGATTCATCGACGATCCCGAACCGGCCACGGGACTTGACCGTGCTGTTATCCCTCCCGGGAAGGGCCTCAGATCCGCCCTAG
GTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCGAATGAACTGTTCGTGGGGAGATTGGCGCAGGTCGGGTTTGCGTTCTCGCTGATCGGAGAAATTATAACG
GGAAAGGGAGCGTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAAATCGAGCCGCTGGTTTTGCTGAATGTTGTGTTCTTCTTCATCGCTGCTTTGAATCC
TGGAACTGGTAAATTTGTCACCGATGAGGAAGAGGATGATTGATTGAACCACTCTGCTTTTTAATTTCTCTGTACATGAATCAACTTTTAGCAAATTCGAGCTTGTGCTG
TTGTAAGGTATTTGTTTTGGTTGAGCACCCTAAACAACAACGAAATCTCTATGGCACAAACTTTCCCTAGTCAATCAATTGTAGGATATCTGAGTTTTTTTTTTAGCCCT
TTTTGCGAATGTGGTTATGTTATTATAACTTTATTTATGTTTGCGCATTAGTTATACTAATAGGTGGATTGGACCCAATCTAAGTTAAGTTGTTTCATATGAATGCATTC
AATTAAGATTAACCGTTTATTATATTATAACA
Protein sequenceShow/hide protein sequence
MRKDEWVMGINERVVKDKKAKRKTYNKSPPITKMKGRRVRLLADRQNLHTHHTLKISQSLKPNPQSKTPPVTQTNRLRDCILSSMAAQTMVISSGVCAGHALNREIAQRL
RPNAQFARLFFTPLPSSSVSVPARGFQTVAVFKSKTKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEP
LLLFFILFTLLGAIGALGDRGRFIDDPEPATGLDRAVIPPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQVGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLL
NVVFFFIAALNPGTGKFVTDEEEDD