; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008652 (gene) of Chayote v1 genome

Gene IDSed0008652
OrganismSechium edule (Chayote v1)
DescriptionF-box family protein
Genome locationLG13:22884601..22885715
RNA-Seq ExpressionSed0008652
SyntenySed0008652
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily
IPR045118 - F-box only protein FBXO9/FBXO48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452610.1 PREDICTED: F-box protein GID2-like [Cucumis melo]2.5e-6471.58Show/hide
Query:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF
        G GDRK  +  + E                GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGF
Subjt:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF

Query:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        RRLHSLFIWPLTK                  S+SS+ + SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
XP_022151668.1 F-box protein GID2 [Momordica charantia]8.2e-7181.76Show/hide
Query:  GDGGGDGDRKKQRAAEGEI-------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR
        GDG GDGDRK  + +  E          GFVNLDD+LLFEVLKHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRR
Subjt:  GDGGGDGDRKKQRAAEGEI-------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR

Query:  LHSLFIWPLTKSSSSALAP-------SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        LHSLFIWPLTK  SSA AP       SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  LHSLFIWPLTKSSSSALAP-------SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
XP_022937325.1 F-box protein GID2-like [Cucurbita moschata]6.7e-6577.06Show/hide
Query:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL
        G GDR   KK RA   + +        GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRRL
Subjt:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL

Query:  HSLFIWPLTK--------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        HSLFIWPLTK        SSS++ +  WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFS+RGR
Subjt:  HSLFIWPLTK--------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
XP_022977120.1 F-box protein GID2-like [Cucurbita maxima]4.3e-6475.14Show/hide
Query:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL
        G GDR   KK RA   + +        GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRRL
Subjt:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL

Query:  HSLFIWPLTK-----------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        HSLFIWPLTK           SSS++ +  WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNF +RGR
Subjt:  HSLFIWPLTK-----------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
XP_038900230.1 F-box protein GID2 [Benincasa hispida]1.3e-6575.29Show/hide
Query:  GDGDRKKQRAAEGEI-----------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR
        GDGDRK  +    E              GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRR
Subjt:  GDGDRKKQRAAEGEI-----------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR

Query:  LHSLFIWPLTK------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG
        LHSLFIWPLTK            S+SS+ + SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG
Subjt:  LHSLFIWPLTK------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG
TrEMBL top hitse value%identityAlignment
A0A1S3BV18 F-box protein GID2-like1.2e-6471.58Show/hide
Query:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF
        G GDRK  +  + E                GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGF
Subjt:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF

Query:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        RRLHSLFIWPLTK                  S+SS+ + SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
A0A5A7VFE5 F-box protein GID2-like1.2e-6471.58Show/hide
Query:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF
        G GDRK  +  + E                GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGF
Subjt:  GDGDRKKQRAAEGEI-------------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGF

Query:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        RRLHSLFIWPLTK                  S+SS+ + SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  RRLHSLFIWPLTK------------------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
A0A6J1DCV3 F-box protein GID23.9e-7181.76Show/hide
Query:  GDGGGDGDRKKQRAAEGEI-------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR
        GDG GDGDRK  + +  E          GFVNLDD+LLFEVLKHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRR
Subjt:  GDGGGDGDRKKQRAAEGEI-------NYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRR

Query:  LHSLFIWPLTKSSSSALAP-------SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        LHSLFIWPLTK  SSA AP       SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  LHSLFIWPLTKSSSSALAP-------SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
A0A6J1FA22 F-box protein GID2-like3.2e-6577.06Show/hide
Query:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL
        G GDR   KK RA   + +        GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRRL
Subjt:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL

Query:  HSLFIWPLTK--------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        HSLFIWPLTK        SSS++ +  WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFS+RGR
Subjt:  HSLFIWPLTK--------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
A0A6J1ILD7 F-box protein GID2-like2.1e-6475.14Show/hide
Query:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL
        G GDR   KK RA   + +        GF+NLDD+LLFEV KHVDARTLAMA CVSKQWHKTAEDERLWELICTRHWANTGC NQQLRSVVLALGGFRRL
Subjt:  GDGDR---KKQRAAEGEIN-------YGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRL

Query:  HSLFIWPLTK-----------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        HSLFIWPLTK           SSS++ +  WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNF +RGR
Subjt:  HSLFIWPLTK-----------SSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
SwissProt top hitse value%identityAlignment
Q7XAK4 F-box protein GID24.0e-2842.62Show/hide
Query:  GDGGGDGDR--KKQR-------------------------------AAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELIC
        GDGGG GD   K+QR                               A EGE      +L +DL+FEVL+  +ARTLA A CVS+ W + AEDERLWE  C
Subjt:  GDGGGDGDR--KKQR-------------------------------AAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELIC

Query:  TRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSSSALAPSWSPFPAMIGSK-PPARWGKDEVHLSLSLLSIRYYEKM
         R WAN G + +QLR+VVL+LGGFRRLH+++I PL    +          P   G + PP R G+D+V LSLSL SI +++ M
Subjt:  TRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSSSALAPSWSPFPAMIGSK-PPARWGKDEVHLSLSLLSIRYYEKM
Q9LUB6 F-box protein SNE1.4e-1230.99Show/hide
Query:  DRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSS
        + K+QR    ++    +N   D+L E+L+ +D  +L  A CV + W   A ++ +WE +C R  +     +  LRSVV ALGG+R L+ L I P      
Subjt:  DRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSS

Query:  SALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM
                    ++   P   W +D++ LSLSL  + YYE++
Subjt:  SALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM
Q9STX3 F-box protein GID25.5e-4660.39Show/hide
Query:  GDGGGDGDRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIW
        GD   + ++K +   E EI  GF NLD++L++EVLKHVDA+TLAM+ CVSK WHKTA+DERLWELICTRHW N GC   QLRSVVLALGGFRRLHSL++W
Subjt:  GDGGGDGDRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIW

Query:  PLTKSSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        PL+K +                  P AR+GKDE+ L+LSLLSIRYYEKM+F+ R
Subjt:  PLTKSSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
Arabidopsis top hitse value%identityAlignment
AT4G24210.1 F-box family protein3.9e-4760.39Show/hide
Query:  GDGGGDGDRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIW
        GD   + ++K +   E EI  GF NLD++L++EVLKHVDA+TLAM+ CVSK WHKTA+DERLWELICTRHW N GC   QLRSVVLALGGFRRLHSL++W
Subjt:  GDGGGDGDRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIW

Query:  PLTKSSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        PL+K +                  P AR+GKDE+ L+LSLLSIRYYEKM+F+ R
Subjt:  PLTKSSSSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
AT5G48170.1 F-box family protein9.8e-1430.99Show/hide
Query:  DRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSS
        + K+QR    ++    +N   D+L E+L+ +D  +L  A CV + W   A ++ +WE +C R  +     +  LRSVV ALGG+R L+ L I P      
Subjt:  DRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSSS

Query:  SALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM
                    ++   P   W +D++ LSLSL  + YYE++
Subjt:  SALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGCGGCGGCGACGGCGGAGGCGACGGGGATCGGAAGAAACAGAGGGCGGCGGAGGGTGAAATCAATTATGGGTTTGTGAATTTAGACGATGATTTGTTATTCGA
GGTTTTGAAACATGTGGATGCAAGGACTCTGGCTATGGCGGGTTGTGTGAGCAAGCAATGGCACAAAACGGCGGAGGATGAGCGGCTTTGGGAGCTGATCTGCACCAGAC
ACTGGGCCAACACCGGCTGCGCCAACCAACAGCTCCGATCTGTCGTTCTAGCCCTCGGCGGCTTCCGCCGGCTCCACTCCCTCTTCATCTGGCCTCTGACCAAGTCCTCC
TCGTCGGCGCTGGCGCCGTCTTGGTCTCCGTTTCCGGCCATGATCGGCTCCAAGCCGCCGGCGCGGTGGGGGAAGGACGAGGTTCATTTGTCGTTGTCGCTTCTCTCAAT
TCGTTACTATGAGAAGATGAATTTCAGTAACAGGGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
GAAGAAGCGCAATACCAGGGTGGGGTTTTCACATTCCTCGAAAACAAACAGACCAAAAAAAAAAAAAAAAAAAAGTGTGATAATCAGAAGAAGACACAACGAGAAGACAG
AGTTGGTCAATTGGGAGAAAAAAGCATGGAAGCGCATTCAATTCTCATCTCGTCGTCTTCGTAAACCTTCAAAAATTTATGCCATAAACTCTTAACCACTCCCAATTTCA
TACCCAATTTTCCAATTCCCCCAAAATTTCTCCCCAAATCGCCGATCTGAGATTTGCAGTTTCTGGGATTTTTCGAAGATGAAGCGCGGCGGCGACGGCGGAGGCGACGG
GGATCGGAAGAAACAGAGGGCGGCGGAGGGTGAAATCAATTATGGGTTTGTGAATTTAGACGATGATTTGTTATTCGAGGTTTTGAAACATGTGGATGCAAGGACTCTGG
CTATGGCGGGTTGTGTGAGCAAGCAATGGCACAAAACGGCGGAGGATGAGCGGCTTTGGGAGCTGATCTGCACCAGACACTGGGCCAACACCGGCTGCGCCAACCAACAG
CTCCGATCTGTCGTTCTAGCCCTCGGCGGCTTCCGCCGGCTCCACTCCCTCTTCATCTGGCCTCTGACCAAGTCCTCCTCGTCGGCGCTGGCGCCGTCTTGGTCTCCGTT
TCCGGCCATGATCGGCTCCAAGCCGCCGGCGCGGTGGGGGAAGGACGAGGTTCATTTGTCGTTGTCGCTTCTCTCAATTCGTTACTATGAGAAGATGAATTTCAGTAACA
GGGGAAGATGAGTGCTCTGTTTTGGATCGTCAAATTTTCATTTCTGGATTTGATTTTTCGACGTTGTTTTTTTTTTTTTTTTTTGGTTTTGTTTTGTTTAATTAGATGTG
TATTTGATTTGGGGTTTGTATTTTATATAAATTTCTAACTTGTGTATTGTGATTATATGTTATATATATGAAGGGGAAGCAAAAGATTTAAGTGGGTTTTTGTTGAAATT
TTGATGGCCAATAAATGTAAAAGGGAAGAGAAAGACAGATGTAAAAATGGGTGGGTTCGAGAATTTGAGGGCTAAAAATGGAATTATGGAAATGGAAATGAAAATGCCCC
ATAAGCTTGAAGACA
Protein sequenceShow/hide protein sequence
MKRGGDGGGDGDRKKQRAAEGEINYGFVNLDDDLLFEVLKHVDARTLAMAGCVSKQWHKTAEDERLWELICTRHWANTGCANQQLRSVVLALGGFRRLHSLFIWPLTKSS
SSALAPSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR