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Sed0008658 (gene) of Chayote v1 genome

Gene IDSed0008658
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1556237..1556606
RNA-Seq ExpressionSed0008658
SyntenySed0008658
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1258.97Show/hide
Query:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAM-GRRLVARQLDFPWKGGYFHPPP--PP
        MASPTALVAW K  F    L+A ++SARELAG NVV R  REMA   N  + G RL+ARQLD  W+G Y  PPP  PP
Subjt:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAM-GRRLVARQLDFPWKGGYFHPPP--PP
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1453.49Show/hide
Query:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGGYF-------HPPPPPLRFS
        MASP+A V W + +FF+L LLAF +SAREL GTN+V R   EM ++TN  +GRRL+ARQLD  W G Y         PPPPP R++
Subjt:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGGYF-------HPPPPPLRFS
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1258.97Show/hide
Query:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDA-MGRRLVARQLDFPWKGGYFHPPP--PP
        MASPTALVAW K  F    L+A ++SARELAG NVV R  REMA   N   +G RL+ARQLD  W+G Y  PPP  PP
Subjt:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDA-MGRRLVARQLDFPWKGGYFHPPP--PP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-1554.12Show/hide
Query:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGGYF------HPPPPPLRFS
        MASP+A V W + +FF+L LLAF +SAREL GTN+V R   EM ++TN  +GRRL+ARQLD  W G Y        PPPPP R++
Subjt:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGGYF------HPPPPPLRFS
KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]3.1e-0754.43Show/hide
Query:  MASPT-ALVAWNKA-IFFSLFLLAFTISARELAGTNVVVRMTREMAMKT--NDAMGRRLVARQLDFPWKGGYFHPPPPP
        MA+ T A VAW K  IFF+L LLA+ ISAREL     V R T E ++ T  ND + RRL  RQLD  W+G YF PP PP
Subjt:  MASPT-ALVAWNKA-IFFSLFLLAFTISARELAGTNVVVRMTREMAMKT--NDAMGRRLVARQLDFPWKGGYFHPPPPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.5e-0754.43Show/hide
Query:  MASPT-ALVAWNKA-IFFSLFLLAFTISARELAGTNVVVRMTREMAMKT--NDAMGRRLVARQLDFPWKGGYFHPPPPP
        MA+ T A VAW K  IFF+L LLA+ ISAREL     V R T E ++ T  ND + RRL  RQLD  W+G YF PP PP
Subjt:  MASPT-ALVAWNKA-IFFSLFLLAFTISARELAGTNVVVRMTREMAMKT--NDAMGRRLVARQLDFPWKGGYFHPPPPP
A0A0A0LB11 Uncharacterized protein3.2e-0552.56Show/hide
Query:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREM-AMKTNDAMGRRLVARQLDFPWKGGYFHPPP--PP
        MA+P  LV      FFSL LLAF  S      T V+ R  REM A++TN  MGR+L ARQLD  WKG Y  PPP  PP
Subjt:  MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREM-AMKTNDAMGRRLVARQLDFPWKGGYFHPPP--PP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACCAACAGCTTTGGTTGCTTGGAACAAGGCTATCTTCTTCTCTTTGTTTCTTCTTGCTTTCACCATTTCTGCTCGGGAACTTGCTGGCACCAATGTCGTGGT
TCGCATGACTCGCGAGATGGCAATGAAAACTAATGATGCGATGGGCAGACGATTAGTTGCTCGACAATTGGATTTTCCTTGGAAAGGAGGTTACTTTCATCCTCCTCCTC
CTCCTCTACGTTTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACCAACAGCTTTGGTTGCTTGGAACAAGGCTATCTTCTTCTCTTTGTTTCTTCTTGCTTTCACCATTTCTGCTCGGGAACTTGCTGGCACCAATGTCGTGGT
TCGCATGACTCGCGAGATGGCAATGAAAACTAATGATGCGATGGGCAGACGATTAGTTGCTCGACAATTGGATTTTCCTTGGAAAGGAGGTTACTTTCATCCTCCTCCTC
CTCCTCTACGTTTCTCTTAA
Protein sequenceShow/hide protein sequence
MASPTALVAWNKAIFFSLFLLAFTISARELAGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGGYFHPPPPPLRFS