; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008670 (gene) of Chayote v1 genome

Gene IDSed0008670
OrganismSechium edule (Chayote v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationLG07:38959439..38961759
RNA-Seq ExpressionSed0008670
SyntenySed0008670
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]1.1e-12476.32Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S IGG  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGAN
        S  A A AAAS SN TTPRSFETTS+HQ                DASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+
Subjt:  STAATATAAASASNTTTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGAN

Query:  DKNASPSLSHLHLETGNHHRE
        DKNA PS+SHLHL++GNHHRE
Subjt:  DKNASPSLSHLHLETGNHHRE

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]3.9e-12780Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S I G  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        S  A A AAAS SN TTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+DKNA PS+SHLHL++G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NHHRE
Subjt:  NHHRE

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]7.8e-12880.33Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S IGG  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        S  A A AAAS SN TTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+DKNA PS+SHLHL++G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NHHRE
Subjt:  NHHRE

XP_022138928.1 protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]1.4e-12479.87Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQ-TQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG
        MLGLRDVLF++PT SSLH Q TQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPC LP PPPPP  AAE S    R   +LKRTQDFGFGKGDS I GG
Subjt:  MLGLRDVLFLSPTSSSLHNQ-TQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG

Query:  D-----------GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
        +           G+ SM VCRDCGNRAKKEC YRRCRTCCKGRGNHCSTH+KSTWVSAARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  D-----------GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAA---ASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHL
        STAA A A+   AS SN TTPRSFET+SNHQDASFKKSLPGQVRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD G +DKN  PS+SHLHL
Subjt:  STAATATAA---ASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHL

Query:  ETGNHHRE
        E+GNHH +
Subjt:  ETGNHHRE

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]6.4e-13081.64Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLLTATPC LPPP P P+Q A++ +DR+RS  +LKRTQDFGFGKGDS +GG  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        STA  A AAAS SN TTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTA++SGEGELAYQATVNIGGHVFKGFLYD GA+DKNA PS+SHLHL++G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NHHR+
Subjt:  NHHRE

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein1.9e-12780Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S I G  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        S  A A AAAS SN TTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+DKNA PS+SHLHL++G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NHHRE
Subjt:  NHHRE

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 13.8e-12880.33Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S IGG  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        S  A A AAAS SN TTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+DKNA PS+SHLHL++G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NHHRE
Subjt:  NHHRE

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 15.1e-12576.32Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--
        MLGLRDVLF++PT SSLH QTQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL P  PPP +   ++ +DR R+  +LKRTQDFGFGKG+S IGG  
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGG--

Query:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                 GD G+GSMAVCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV AARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  ---------GD-GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGAN
        S  A A AAAS SN TTPRSFETTS+HQ                DASFKKSLPG VRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD GA+
Subjt:  STAATATAAASASNTTTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGAN

Query:  DKNASPSLSHLHLETGNHHRE
        DKNA PS+SHLHL++GNHHRE
Subjt:  DKNASPSLSHLHLETGNHHRE

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 16.7e-12579.87Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQ-TQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG
        MLGLRDVLF++PT SSLH Q TQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPC LP PPPPP  AAE S    R   +LKRTQDFGFGKGDS I GG
Subjt:  MLGLRDVLFLSPTSSSLHNQ-TQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG

Query:  D-----------GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
        +           G+ SM VCRDCGNRAKKEC YRRCRTCCKGRGNHCSTH+KSTWVSAARRRERQMLV MDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  D-----------GEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAA---ASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHL
        STAA A A+   AS SN TTPRSFET+SNHQDASFKKSLPGQVRAPAVFRCHRVTA+SSGEGELAYQATVNIGGHVFKGFLYD G +DKN  PS+SHLHL
Subjt:  STAATATAA---ASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHL

Query:  ETGNHHRE
        E+GNHH +
Subjt:  ETGNHHRE

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like1.7e-12077.38Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG-
        MLGLRDVLF++PT SSLH  TQI+SSDHHPSLPLPSS+ALGV VGIFPLL ATPCL PPP   PD    E SDR+RS  +LKRTQDFGFGKGDS IGGG 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGG-

Query:  -----------DGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
                    G+GS+ VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTH+KSTWV A+RRRERQMLV MDGVAT+    GSSGSSSAGAKRP+VLIPSQ
Subjt:  -----------DGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG
        +TA  A AAAS SN TTPRSFETTS+HQDASFKKSLPGQV+APAVF+CHRVTA+SSGEGEL YQATVNIGGHVFKGFLYD GA+ KNA PS+SHLHLE+G
Subjt:  STAATATAAASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETG

Query:  NHHRE
        NH R+
Subjt:  NHHRE

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 21.9e-2846.95Show/hide
Query:  CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTPR
        CRDCGN+AKK+C + RCRTCCK RG  CSTH++STW+  ARRRERQ  + M      S  GG  GS S GA      IP +    T    +S+S      
Subjt:  CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTPR

Query:  SFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAL-SSGEGELAYQATVNIGGHVFKGFLYDHG
        S        +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYD G
Subjt:  SFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAL-SSGEGELAYQATVNIGGHVFKGFLYDHG

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 11.2e-5445.45Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ
        M+GLRDV  ++P     H    ++S   H +    +++ALGVGV   PLLTA           P Q  E+S               ++     +H K T 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ

Query:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI
            G   +  G G G    A C+DCGN+AKKECK RRCRTCCK RG  CSTH+KSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++ 
Subjt:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI

Query:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH
          Q     AT+  S SN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD G   K   PS+S LH
Subjt:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH

Query:  L-ETGNHH
        L  + N+H
Subjt:  L-ETGNHH

Q9M2U4 Protein SHI RELATED SEQUENCE 62.5e-2841.48Show/hide
Query:  VCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTP
        VCRDCGNRAKKEC + RCRTCCK RG +C TH+KSTW+ ++  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTP

Query:  RSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGE-GELAYQATVNIGGHVFKGFLYDHGANDKNASPSLS
            TT++ Q+  F++ LPG++ APAVF+  RVTA+S+ E  E+ YQATV I GH+FKGFL+ +G +   A P LS
Subjt:  RSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGE-GELAYQATVNIGGHVFKGFLYDHGANDKNASPSLS

Q9SD40 Protein SHI RELATED SEQUENCE 12.1e-2744.83Show/hide
Query:  GGDGEGSMAV-CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATA
        GG G GS  V C+DCGN+AKK+C + RCRTCCK RG  CSTH++STWV AA+RRERQ  +A     T    G S        KR R  +P+ S++   T 
Subjt:  GGDGEGSMAV-CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATA

Query:  AASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHG
          S S                     + P +V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G
Subjt:  AASASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHG

Q9XGX0 Protein SHORT INTERNODES2.0e-2543.02Show/hide
Query:  GDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAA
        G G G  + C+DCGN++KK+C + RCRTCCK RG  C TH+KSTWV AA+RRERQ       ++T        GS     KR R  IP++ST+   T   
Subjt:  GDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAA

Query:  SASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNAS
        S            TS  +  +F    P +V + AVFRC RV+++   E E AY+  V+IGGHVFKG LYD G  ++++S
Subjt:  SASNTTTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNAS

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related1.4e-2946.95Show/hide
Query:  CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTPR
        CRDCGN+AKK+C + RCRTCCK RG  CSTH++STW+  ARRRERQ  + M      S  GG  GS S GA      IP +    T    +S+S      
Subjt:  CRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTPR

Query:  SFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAL-SSGEGELAYQATVNIGGHVFKGFLYDHG
        S        +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYD G
Subjt:  SFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAL-SSGEGELAYQATVNIGGHVFKGFLYDHG

AT5G12330.1 Lateral root primordium (LRP) protein-related8.5e-5645.45Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ
        M+GLRDV  ++P     H    ++S   H +    +++ALGVGV   PLLTA           P Q  E+S               ++     +H K T 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ

Query:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI
            G   +  G G G    A C+DCGN+AKKECK RRCRTCCK RG  CSTH+KSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++ 
Subjt:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI

Query:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH
          Q     AT+  S SN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD G   K   PS+S LH
Subjt:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH

Query:  L-ETGNHH
        L  + N+H
Subjt:  L-ETGNHH

AT5G12330.2 Lateral root primordium (LRP) protein-related8.5e-5645.45Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ
        M+GLRDV  ++P     H    ++S   H +    +++ALGVGV   PLLTA           P Q  E+S               ++     +H K T 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ

Query:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI
            G   +  G G G    A C+DCGN+AKKECK RRCRTCCK RG  CSTH+KSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++ 
Subjt:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI

Query:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH
          Q     AT+  S SN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD G   K   PS+S LH
Subjt:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH

Query:  L-ETGNHH
        L  + N+H
Subjt:  L-ETGNHH

AT5G12330.3 Lateral root primordium (LRP) protein-related5.0e-3241.84Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ
        M+GLRDV  ++P     H    ++S   H +    +++ALGVGV   PLLTA           P Q  E+S               ++     +H K T 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ

Query:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI
            G   +  G G G    A C+DCGN+AKKECK RRCRTCCK RG  CSTH+KSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++ 
Subjt:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI

Query:  PSQSTAATATAAASASNTTTPRSFETTSNHQDASFKKSL
          Q     AT+  S SN T P+SFET+S+ Q  SF  SL
Subjt:  PSQSTAATATAAASASNTTTPRSFETTSNHQDASFKKSL

AT5G12330.4 Lateral root primordium (LRP) protein-related8.5e-5645.45Show/hide
Query:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ
        M+GLRDV  ++P     H    ++S   H +    +++ALGVGV   PLLTA           P Q  E+S               ++     +H K T 
Subjt:  MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEES---------------SDRNRSSVHLKRTQ

Query:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI
            G   +  G G G    A C+DCGN+AKKECK RRCRTCCK RG  CSTH+KSTWVSAARRRERQ++        A+   GSS S+S+G K+PR++ 
Subjt:  DFGFGKGDSFIGGGDGEGSMAVCRDCGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLI

Query:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH
          Q     AT+  S SN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD G   K   PS+S LH
Subjt:  PSQSTAATATAAASASNTTTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLH

Query:  L-ETGNHH
        L  + N+H
Subjt:  L-ETGNHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCTCAGAGATGTTCTGTTTCTATCCCCAACATCATCTTCTCTTCACAATCAGACCCAAATCCTCTCTTCCGATCACCACCCATCCCTTCCTCTCCCCTCCTC
CTCCGCTCTCGGCGTCGGCGTCGGCATTTTCCCACTTTTAACGGCAACCCCATGTCTCCTTCCTCCGCCGCCGCCGCCGCCCGATCAGGCGGCAGAGGAAAGTAGCGATC
GTAATCGGAGCTCCGTCCATCTGAAGAGAACCCAGGATTTTGGGTTTGGAAAAGGGGATTCGTTCATCGGCGGCGGCGACGGCGAGGGTTCGATGGCGGTTTGTCGGGAT
TGTGGGAACAGAGCAAAAAAGGAGTGCAAGTATCGGAGGTGTAGGACTTGTTGTAAGGGGCGTGGGAATCATTGCTCCACTCACATGAAGAGCACGTGGGTTTCGGCGGC
TCGCCGCCGTGAGCGGCAGATGTTGGTGGCGATGGACGGCGTCGCCACCGCGAGTGCCGACGGTGGGTCCTCGGGTTCTTCCTCTGCTGGTGCCAAACGCCCTAGAGTTT
TGATTCCTTCTCAGAGTACGGCCGCCACCGCCACCGCCGCCGCCTCCGCCTCGAACACCACCACTCCCCGGAGCTTTGAAACAACCTCTAACCATCAGGATGCAAGCTTC
AAGAAGTCGTTACCCGGGCAAGTTCGGGCTCCGGCCGTGTTCCGGTGTCATAGAGTGACAGCCCTTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACAT
TGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCATGGAGCTAATGACAAAAATGCATCCCCATCTCTTTCACACCTCCATTTGGAAACTGGTAACCACCACAGGGAAT
AG
mRNA sequenceShow/hide mRNA sequence
GTTTGGCACTGCACACTTTCAAGAATCATTCATTTCATCTTCTTCATTTCTCTCTCTCTCTTCTCTGTTTCTGTGAATTCAAACACTGAATTCCATTTCCATTTCATTCT
CTCTAACAATTTCACTCCAAATTCCCCATTTCACCCTTCTTCACCCAAACCAGAAACACCCTCTTTCAATTTCTTGTTTTCAATAATCAATCCTCTGTTTTTCAACAATG
TTGGGTCTCAGAGATGTTCTGTTTCTATCCCCAACATCATCTTCTCTTCACAATCAGACCCAAATCCTCTCTTCCGATCACCACCCATCCCTTCCTCTCCCCTCCTCCTC
CGCTCTCGGCGTCGGCGTCGGCATTTTCCCACTTTTAACGGCAACCCCATGTCTCCTTCCTCCGCCGCCGCCGCCGCCCGATCAGGCGGCAGAGGAAAGTAGCGATCGTA
ATCGGAGCTCCGTCCATCTGAAGAGAACCCAGGATTTTGGGTTTGGAAAAGGGGATTCGTTCATCGGCGGCGGCGACGGCGAGGGTTCGATGGCGGTTTGTCGGGATTGT
GGGAACAGAGCAAAAAAGGAGTGCAAGTATCGGAGGTGTAGGACTTGTTGTAAGGGGCGTGGGAATCATTGCTCCACTCACATGAAGAGCACGTGGGTTTCGGCGGCTCG
CCGCCGTGAGCGGCAGATGTTGGTGGCGATGGACGGCGTCGCCACCGCGAGTGCCGACGGTGGGTCCTCGGGTTCTTCCTCTGCTGGTGCCAAACGCCCTAGAGTTTTGA
TTCCTTCTCAGAGTACGGCCGCCACCGCCACCGCCGCCGCCTCCGCCTCGAACACCACCACTCCCCGGAGCTTTGAAACAACCTCTAACCATCAGGATGCAAGCTTCAAG
AAGTCGTTACCCGGGCAAGTTCGGGCTCCGGCCGTGTTCCGGTGTCATAGAGTGACAGCCCTTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGG
TGGCCATGTCTTCAAAGGCTTTCTCTATGATCATGGAGCTAATGACAAAAATGCATCCCCATCTCTTTCACACCTCCATTTGGAAACTGGTAACCACCACAGGGAATAGA
AGAAGACATTCCTCCTAATCTTTCTTCTCCAATTCCCCAAAAACTCGGTCTCAACCCCTCGAAAAATATCATATCTCTACTAGGATTCAGTGATCTCCAATGTTATTATA
TAAGTCCTATATAGTTATTTTCATGGTTGTAACAGGATCTTCTATTCTATAGTTTCCTAGCTTTAAAAGCTGGGATTAGCATTAAATTACTCAAGTCCAATGATAGTTGG
ATACTGATCTTCTGTATATTTCTGTATATTGCTGAAATTTTTTGTAACTTTCATCTATCCAAACTTCATTAAACATCTGCTGAATCAAGCTAGCCTGCGACTGTCCTCTT
GTTTGATCGTCTACCTCGGAAAGTTTCACAAAATGCTGGTCTCTTAACGCGCCGTGAGCATCTTGCCACACCATGATGGGACAGACAAAATATATGCTATGTTTTTTGTT
TCTACATTAACCATCTTTTACCTACAACATTGATCATTTTCACTGAAAT
Protein sequenceShow/hide protein sequence
MLGLRDVLFLSPTSSSLHNQTQILSSDHHPSLPLPSSSALGVGVGIFPLLTATPCLLPPPPPPPDQAAEESSDRNRSSVHLKRTQDFGFGKGDSFIGGGDGEGSMAVCRD
CGNRAKKECKYRRCRTCCKGRGNHCSTHMKSTWVSAARRRERQMLVAMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAATATAAASASNTTTPRSFETTSNHQDASF
KKSLPGQVRAPAVFRCHRVTALSSGEGELAYQATVNIGGHVFKGFLYDHGANDKNASPSLSHLHLETGNHHRE