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Sed0008683 (gene) of Chayote v1 genome

Gene IDSed0008683
OrganismSechium edule (Chayote v1)
DescriptionAnkyrin repeat family protein
Genome locationLG14:22287167..22287848
RNA-Seq ExpressionSed0008683
SyntenySed0008683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594665.1 Ankyrin repeat domain-containing protein 13C, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2584.42Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG+  SDKKA SK GFAKAK ATVAG+KKIG GISNG KWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS

KAG6603780.1 Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2583.33Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG + SDKK  SK+G AKA AATVAG+KKIG GISNG KWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK

KAG7026631.1 hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2685.71Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS
        MAAEAPSWADQWGAGGIGA+EEDD SKAKG+  SDKKA SK GFAKAKAATVAG+KKIG GISNG KWIMNPRKK+S
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS

KGN49108.1 hypothetical protein Csa_002989 [Cucumis sativus]2.7e-2787.18Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGA+EEDDDSKAKG RS+DKK  SK GFAK KAATVAG+KKIG GISNG KWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK

TYK13043.1 Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa]1.5e-2585.9Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGA+EE DDSKAKG RS+DKK+ SK GFAKAKAAT+AG+KKIG GISNG KWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK

TrEMBL top hitse value%identityAlignment
A0A0A0KHT9 Uncharacterized protein1.3e-2787.18Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGA+EEDDDSKAKG RS+DKK  SK GFAK KAATVAG+KKIG GISNG KWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK

A0A2P5EAN9 Uncharacterized protein (Fragment)1.7e-1458.44Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS
        MA+E PSWADQWGAGGIGA+EEDD + AK +  ++KK   K G  KAKAA +AG++KI  G SNG KWI N  +K +
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS

A0A4S4DD10 Uncharacterized protein5.7e-1560Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKK
        MA EAPSWADQWGAGGIGA+E +D+ KA GD+ SDKK  S  G  KAKA  +AG++K+  G  NG KWI N  +K
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKK

A0A5D3CM93 Ankyrin repeat family protein, putative isoform 17.2e-2685.9Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MAAEAPSWADQWGAGGIGA+EE DDSKAKG RS+DKK+ SK GFAKAKAAT+AG+KKIG GISNG KWIMNPRKKSSK
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK

W9RHJ5 Uncharacterized protein5.7e-1561.33Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKK
        MA+EAPSWADQWGAGGIGALEE+D++ +K D  ++KK   K G  KAKAA +AG++KI  G SNG KWI N  +K
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11740.1 ankyrin repeat family protein4.8e-0638.96Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS
        MA+EAPSWADQWG GGIG +  ++ +  K D +  K   +K G  KAK     G         N  K ++  +KK S
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSS

AT1G62045.1 BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1)4.8e-0641.03Show/hide
Query:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK
        MA+EAPSWADQWG GGIG + E+D++K+K D        +K             S KI   +S  FKW+ N   K  K
Subjt:  MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGAAGCACCAAGCTGGGCTGACCAATGGGGAGCTGGAGGGATAGGAGCCTTGGAAGAAGACGACGACAGTAAAGCCAAAGGAGACCGCAGCTCCGACAAGAA
GGCCAGTTCTAAGACTGGATTCGCAAAGGCCAAGGCCGCGACTGTGGCTGGTTCCAAAAAGATTGGAGGTGGGATATCTAATGGCTTCAAGTGGATCATGAACCCACGCA
AGAAAAGCTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
TCTTCATCTTTTTTTATCCCCAGGTATGACTGGATCTATCTTAGATCTCTCAAGTTATAGCTTAGTTTTATTTGTAATTCTTCTAGCTCAAGATATGTTAGTTTAGATCT
TTCTTTCTCTTGTTTTGTTTTATAACCTCCTAGAAATGGTTTAAACAAACCAACAAAGGTCTACGAATATTATATAACCTAGTAGCCAAGAGGTTACAGGTTCGAGTCTC
CCAAATATTATTGGACTAAAAAAATAAAAGTTTGAGCAATTTGACAGCAAAAGGCTAGCTGTATGTTGAAGAAAAGGCTAAAACTTTCTGTTAGCCTGACTGATATGGGT
AAATTTATTGGATATCTCAACAAGAATTTGATTTTTAGCCATATGCATTTGGTTGGTGTTACTGTTAAATGGATGGTTGGTGAGTTTAATGTATATTGGTTAGGAATTAG
ACAGCATGGCTGCAGAAGCACCAAGCTGGGCTGACCAATGGGGAGCTGGAGGGATAGGAGCCTTGGAAGAAGACGACGACAGTAAAGCCAAAGGAGACCGCAGCTCCGAC
AAGAAGGCCAGTTCTAAGACTGGATTCGCAAAGGCCAAGGCCGCGACTGTGGCTGGTTCCAAAAAGATTGGAGGTGGGATATCTAATGGCTTCAAGTGGATCATGAACCC
ACGCAAGAAAAGCTCCAAGTAA
Protein sequenceShow/hide protein sequence
MAAEAPSWADQWGAGGIGALEEDDDSKAKGDRSSDKKASSKTGFAKAKAATVAGSKKIGGGISNGFKWIMNPRKKSSK