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Sed0008687 (gene) of Chayote v1 genome

Gene IDSed0008687
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG12:3442041..3445976
RNA-Seq ExpressionSed0008687
SyntenySed0008687
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454051.1 PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo]5.4e-3876.15Show/hide
Query:  MMRRQQRD-AQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVA
        MM+RQQRD  +SSVF+ELSSLVMNILR+PPSSIPFSDHS      S SRR +  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVA
Subjt:  MMRRQQRD-AQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVA

Query:  AVVSSIFMIGRSIFYCAAAPPSPRKDIPAW
        AVVS + MIGRSI   A AP  PRKDIPAW
Subjt:  AVVSSIFMIGRSIFYCAAAPPSPRKDIPAW
XP_022158962.1 uncharacterized protein LOC111025409 [Momordica charantia]3.0e-4176.74Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAA
        M+RRQQRD +SSVF+ELS+LVMNI+R PPSS+ FSDHS      S SRRP+  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVAA
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAA

Query:  VVSSIFMIGRSIFYCAAAPPSPRKDIPAW
        VVSSI MIGRSIF  A APP+PRKDI AW
Subjt:  VVSSIFMIGRSIFYCAAAPPSPRKDIPAW
XP_022932614.1 uncharacterized protein LOC111439117 isoform X2 [Cucurbita moschata]4.8e-3975.61Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF
        M R+QQR++QSSVF+ELSSL MNILRSPPSSIPFSDHS      + TQ+TPAGFA+LLLG+SL L+L GSVTFFIGF+MMPWVIGLVMFF+VAA+VSS+F
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF

Query:  MIGRSIFYCAAAPPSPRKDIPAW
        MIGRSI Y   A P PRKDIPAW
Subjt:  MIGRSIFYCAAAPPSPRKDIPAW
XP_022979452.1 uncharacterized protein LOC111479165 [Cucurbita maxima]5.4e-3876.56Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSS-----PSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAV
        MMRRQQ+D QSSVF+ELSSLVMNILRSPPS+IP SD SS      SRRP+  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVAAV
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSS-----PSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAV

Query:  VSSIFMIGRSIFYCAAAPPSPRKDIPAW
        VS + MIGRSIF  A AP   R+DIPAW
Subjt:  VSSIFMIGRSIFYCAAAPPSPRKDIPAW
XP_023538788.1 uncharacterized protein LOC111799610 isoform X2 [Cucurbita pepo subsp. pepo]1.4e-3876.23Show/hide
Query:  MRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIFM
        M R+QR++QSSVF+ELSSL MNILRSPPSSIPFSDHS      V TQ+TPAGFA+LLLG+SL L+L GSVTFFIGF+MMPWVIGLVMFF+VAA VSS+FM
Subjt:  MRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIFM

Query:  IGRSIFYCAAAPPSPRKDIPAW
        IGRSI Y   A P+PRKDIPAW
Subjt:  IGRSIFYCAAAPPSPRKDIPAW
TrEMBL top hitse value%identityAlignment
A0A1S3BX78 uncharacterized protein LOC103494590 isoform X22.6e-3876.15Show/hide
Query:  MMRRQQRD-AQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVA
        MM+RQQRD  +SSVF+ELSSLVMNILR+PPSSIPFSDHS      S SRR +  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVA
Subjt:  MMRRQQRD-AQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVA

Query:  AVVSSIFMIGRSIFYCAAAPPSPRKDIPAW
        AVVS + MIGRSI   A AP  PRKDIPAW
Subjt:  AVVSSIFMIGRSIFYCAAAPPSPRKDIPAW
A0A6J1DYI7 uncharacterized protein LOC1110254091.5e-4176.74Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAA
        M+RRQQRD +SSVF+ELS+LVMNI+R PPSS+ FSDHS      S SRRP+  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVAA
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHS------SPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAA

Query:  VVSSIFMIGRSIFYCAAAPPSPRKDIPAW
        VVSSI MIGRSIF  A APP+PRKDI AW
Subjt:  VVSSIFMIGRSIFYCAAAPPSPRKDIPAW
A0A6J1EXH3 uncharacterized protein LOC111439117 isoform X22.3e-3975.61Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF
        M R+QQR++QSSVF+ELSSL MNILRSPPSSIPFSDHS      + TQ+TPAGFA+LLLG+SL L+L GSVTFFIGF+MMPWVIGLVMFF+VAA+VSS+F
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF

Query:  MIGRSIFYCAAAPPSPRKDIPAW
        MIGRSI Y   A P PRKDIPAW
Subjt:  MIGRSIFYCAAAPPSPRKDIPAW
A0A6J1F279 uncharacterized protein LOC111439117 isoform X11.7e-3775.21Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF
        M R+QQR++QSSVF+ELSSL MNILRSPPSSIPFSDHS      + TQ+TPAGFA+LLLG+SL L+L GSVTFFIGF+MMPWVIGLVMFF+VAA+VSS+F
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIF

Query:  MIGRSIFYCAAAPPSPRKDIP
        MIGRSI Y   A P PRKDIP
Subjt:  MIGRSIFYCAAAPPSPRKDIP
A0A6J1INR6 uncharacterized protein LOC1114791652.6e-3876.56Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSS-----PSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAV
        MMRRQQ+D QSSVF+ELSSLVMNILRSPPS+IP SD SS      SRRP+  QITPAGFA+LLLGISL L+L GSVTFFIGF+MMPWVIGLVMFFYVAAV
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSS-----PSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAV

Query:  VSSIFMIGRSIFYCAAAPPSPRKDIPAW
        VS + MIGRSIF  A AP   R+DIPAW
Subjt:  VSSIFMIGRSIFYCAAAPPSPRKDIPAW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein2.2e-2953.24Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSI---------------PFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIG
        MMRRQ+ + QS VF++LSSLV+N+LRSPP  I               PFS H   S  P    I+P+GFA+LLLGIS+ L+L GSVTFFIGFL+MPWV+ 
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSI---------------PFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIG

Query:  LVMFFYVAAVVSSIFMIGRSIFYCAAAPPSPR-KDIPAW
        L++ FYVA +VS+I M+GRSI      PPSP  K+I  W
Subjt:  LVMFFYVAAVVSSIFMIGRSIFYCAAAPPSPR-KDIPAW
AT1G27290.2 unknown protein2.2e-2953.24Show/hide
Query:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSI---------------PFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIG
        MMRRQ+ + QS VF++LSSLV+N+LRSPP  I               PFS H   S  P    I+P+GFA+LLLGIS+ L+L GSVTFFIGFL+MPWV+ 
Subjt:  MMRRQQRDAQSSVFHELSSLVMNILRSPPSSI---------------PFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIG

Query:  LVMFFYVAAVVSSIFMIGRSIFYCAAAPPSPR-KDIPAW
        L++ FYVA +VS+I M+GRSI      PPSP  K+I  W
Subjt:  LVMFFYVAAVVSSIFMIGRSIFYCAAAPPSPR-KDIPAW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGACGGCAGCAGCGGGATGCGCAATCGAGTGTTTTCCATGAGCTTTCTTCTCTTGTTATGAATATTCTCCGGTCTCCGCCGTCGTCCATCCCGTTTTCCGATCA
CTCATCGCCGTCGCGGCGGCCGGTTACGACGCAGATTACGCCGGCGGGGTTTGCGGCGCTTCTTTTAGGGATTTCTCTGACTCTGATCCTCGGTGGATCGGTCACGTTCT
TCATTGGGTTCTTGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTATGTCGCCGCCGTTGTTTCGAGCATCTTCATGATTGGGCGATCGATTTTTTACTGTGCT
GCGGCTCCGCCTTCGCCCAGAAAGGATATTCCAGCTTGGTAA
mRNA sequenceShow/hide mRNA sequence
CACGCCAGATGGTAAGAAGCCATTACGCGACCCCAAGCCCCTTCGTTATCCATTGAAGATAAGATCCCACAGCTCACAATTCCTTTCCATTACGTGTAATCCACCCAATC
TTTCCTCTCTTTTCACCCATTATTTATCCAAATCCCAATCCCAATCCCAATTCCTGTTCGGAAACACAAAAAACAGAGCAAAATTGAATCAGATCTTACTGTAACTCTGG
ATAAAACGGCCTTTCAGTTCAATTTTCGAGTTGGGTTTTCACCGTTTTCTGTATTCTTAGCTGTGCGTTGAATGATTTGATCAAGAATCAAACAAAAACCCACTTGTTGT
TGTTGTTGACGGGTTTTAGTCTCTTCGATCCAATCGTGGACCCCCATGTTTTTATAAAGTTCTTTAGATTTATCCGTTTTTCTTGAATCTTTCAACAAAAGCGTTTCTGG
GTTTTGTTTTTCCACGTTGAGAAGATTTGCCCTTTTGAGGATTTTGGGAGATTTTGATCATCGAAGAATTATGATGCGACGGCAGCAGCGGGATGCGCAATCGAGTGTTT
TCCATGAGCTTTCTTCTCTTGTTATGAATATTCTCCGGTCTCCGCCGTCGTCCATCCCGTTTTCCGATCACTCATCGCCGTCGCGGCGGCCGGTTACGACGCAGATTACG
CCGGCGGGGTTTGCGGCGCTTCTTTTAGGGATTTCTCTGACTCTGATCCTCGGTGGATCGGTCACGTTCTTCATTGGGTTCTTGATGATGCCTTGGGTTATTGGATTGGT
TATGTTTTTCTATGTCGCCGCCGTTGTTTCGAGCATCTTCATGATTGGGCGATCGATTTTTTACTGTGCTGCGGCTCCGCCTTCGCCCAGAAAGGATATTCCAGCTTGGT
AACGAATGAGAAGAGGAAGATGGTGCTGGATACTAGCAATTGCTATTTACAGTGGTTGCAACTTGATGCTTTAATTTCCTCGGTGATGCGATGCTGGTGGCGGCTTTCTT
CTCGACTCGACGGGGAAGAAGCATTTGTAAATAATGTATTTCATACTGGATCCTGTTGATATTGTTTCTGCTGTTAAATTGAAGGGAGCAAATTGTGGGGGGTTAAGAAT
TTGATGAGGAAATGTTAGAGGTGGGGGACCTTGCTTCATTTCACTTCCTCCTCTTGTGGTATCTCATAATATCCCATACCTTTAGATGTTATTTGTATTGATTATAGAAG
TAATTAGCTATCAGGTTCTCAAATATAGATTCAGAAATATGTTCCCTCTTTTCTATCTAGATTTTCTTCCAAAACTCTACATAAATACTCGAAAATCTCGAAAATCGTTG
TTCTTTGTTGAATGCTTGTGTCACTTTGCTCGGGTCCGGGATGGAAGGCTTTACAGAAAATATGTAGAGATGGTGCATTTTTCTTGCTAAGAGAAATGTGTAAGTACTTT
GGCCCTTGAAGATGCTTTTATAATCATATTGTTGTAATTTTCACATTCAATAACTCATTTTCAAGACTTT
Protein sequenceShow/hide protein sequence
MMRRQQRDAQSSVFHELSSLVMNILRSPPSSIPFSDHSSPSRRPVTTQITPAGFAALLLGISLTLILGGSVTFFIGFLMMPWVIGLVMFFYVAAVVSSIFMIGRSIFYCA
AAPPSPRKDIPAW