CuGenDBv2

Gene ID	Sed0008704
Organism	Sechium edule (Chayote v1)
Description	BEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome location	LG08:38695201..38695736
RNA-Seq Expression	Sed0008704
Synteny	Sed0008704
Gene Ontology terms	GO:0009735 - response to cytokinin (biological process)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]

1.5e-16

81.67

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEED RE+LA+SSS KI++FSVSSPP
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-16

81.67

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEEDHRE L++SSSLKI++FSVSS P
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-16

81.67

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEEDHRE L++SSSLKI++FSVSS P
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]

2.2e-15

78.33

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEED RE L +SSS KI++FSV SPP
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

PQP93653.1 hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]

2.8e-07

53.42

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS
        M A SRLARFI+E  PPQF+SV+R RT  VLDTINEE+        ++L +SSS K    S SSPP F ++ S
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYE6 Uncharacterized protein

1.0e-15

78.33

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEED RE L +SSS KI++FSV SPP
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

A0A314XQS6 Uncharacterized protein

1.4e-07

53.42

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS
        M A SRLARFI+E  PPQF+SV+R RT  VLDTINEE+        ++L +SSS K    S SSPP F ++ S
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS

A0A5A7UJX7 Uncharacterized protein

7.2e-17

81.67

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Query:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP
        MAATSRLARFISEA PPQF+SV+RRR+P VLDTINEED RE+LA+SSS KI++FSVSSPP
Subjt:  MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPP

A0A5E4FYK5 PREDICTED: galactosyltransferase family

2.0e-06

52.11

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Query:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS
        A SRLARFI+E  PPQF+SV+R RT  VLDTINEE+        ++L +SSS K    S  SPP F ++ S
Subjt:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDH------RETLAASSSLKIERFSVSSPPKFPNSFS

A0A6J5WYZ3 Uncharacterized protein

2.6e-06

54.55

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Query:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHR------ETLAASSSLKIERFSVSSPPKF
        A SRLARFI+E  PPQF+SV+R RT  VLDTINEE+        ++L +SS  K    S SSPP F
Subjt:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHR------ETLAASSSLKIERFSVSSPPKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)

9.3e-09

48.53

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Query:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPPKFPNSFSIRS
        ATSRLARFI+E  PPQF++V+RRRT  VLDTI EE+      +          +SSP   P S S+ S
Subjt:  ATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPPKFPNSFSIRS

AT4G21060.1 Galactosyltransferase family protein

9.7e-06

58.54

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Query:  ATSRLARFISEARPPQFMSVIRRR--TPNVLDTINEEDHRE
        ATSRLARF+SE  PPQF++V+RR       LDTI EE+++E
Subjt:  ATSRLARFISEARPPQFMSVIRRR--TPNVLDTINEEDHRE

Sequences

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CDS sequence

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ATGGCAGCCACATCCCGATTGGCCAGGTTCATCAGCGAGGCTCGCCCTCCCCAGTTTATGTCCGTGATTCGGCGCCGAACCCCCAATGTTTTGGACACCATTAACGAAGA
AGATCACCGAGAAACCCTAGCCGCCTCTTCCTCCCTGAAGATCGAACGGTTCTCTGTTTCTTCCCCGCCGAAATTCCCCAATTCTTTCTCGATCAGGTCCCCTTGA

mRNA sequence

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AAAATCCCCTTTCTAAGAGAATCAGCTTCTCCTTTCTGCAACTTTTCTTCAAAGCTCGAAACCCTAAATTTCGAAAATGGCAGCCACATCCCGATTGGCCAGGTTCATCA
GCGAGGCTCGCCCTCCCCAGTTTATGTCCGTGATTCGGCGCCGAACCCCCAATGTTTTGGACACCATTAACGAAGAAGATCACCGAGAAACCCTAGCCGCCTCTTCCTCC
CTGAAGATCGAACGGTTCTCTGTTTCTTCCCCGCCGAAATTCCCCAATTCTTTCTCGATCAGGTCCCCTTGAGGCCTTTCTCCATTTTCGAGCACTTAGATTTGGGGGTT
TTTTGTAATTACTTTCTGATTTTTGTTTGTAAATCCTCTGTAATCTGCTTTTCCGTTTTGCGCCGATCGGGTCCGGTGGCCGGAAATCGTGTTGTAGATAATGAGACGGC
GGCGGATTCGGCTGCCGGCGTTCAATGTATGTATTTCTCAACGTGTTTTTGTACCGTGTAATTTGATAATTAATTGATAGGTTATGTTTGGTTAAG

Protein sequence

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MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPPKFPNSFSIRSP

Sed0008704 (gene) of Chayote v1 genome