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Sed0008711 (gene) of Chayote v1 genome

Gene IDSed0008711
OrganismSechium edule (Chayote v1)
DescriptionFerroxidase
Genome locationLG11:2188776..2190871
RNA-Seq ExpressionSed0008711
SyntenySed0008711
Gene Ontology termsGO:1903329 - regulation of iron-sulfur cluster assembly (biological process)
GO:0006783 - heme biosynthetic process (biological process)
GO:0006811 - ion transport (biological process)
GO:0006879 - cellular iron ion homeostasis (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0018283 - iron incorporation into metallo-sulfur cluster (biological process)
GO:0009060 - aerobic respiration (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0008199 - ferric iron binding (molecular function)
GO:0034986 - iron chaperone activity (molecular function)
GO:0008198 - ferrous iron binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
GO:0004322 - ferroxidase activity (molecular function)
InterPro domainsIPR002908 - Frataxin/CyaY
IPR020895 - Frataxin conserved site
IPR036524 - Frataxin/CyaY superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604827.1 Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3752.28Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               +YGDD+QIDGFDVDYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL RLLETEL QLCGEPI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

XP_022140770.1 frataxin, mitochondrial [Momordica charantia]1.0e-4053.57Show/hide
Query:  MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRRGFSRPF----------------------------------
        MA KLL PLRKL R+LK+PSSSSY                 LL +SDN +QF    F R   SRP                                   
Subjt:  MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRRGFSRPF----------------------------------

Query:  ------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
              +YGDD+QIDGFDVDYG  +  TL+LGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD+NSQAWIYRRNKANL RLLETELA+LCGEPI L
Subjt:  ------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

XP_022947402.1 frataxin, mitochondrial [Cucurbita moschata]1.8e-3752.28Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               +YGDD+QIDGFDVDYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL RLLETEL QLCGEPI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

XP_022971111.1 frataxin, mitochondrial [Cucurbita maxima]1.5e-3953.81Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               +YGDD+QIDGFDVDYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRRNKANL RLLETELAQLCGEPI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

XP_023533562.1 frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]3.6e-3852.28Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               ++GDD+QIDGFDVDYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSP SGP RFDWD++SQAWIYRRNKANL RLLETELAQLCG+PI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

TrEMBL top hitse value%identityAlignment
A0A0A0KAC6 Ferroxidase5.6e-3750.79Show/hide
Query:  AKLLPPLRKLPRMLKMPSSSSYL-------------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------------
        AKLL PLRKL R+LK+PS SS               L+++ +N +QF    FLR   SRP                                        
Subjt:  AKLLPPLRKLPRMLKMPSSSSYL-------------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------------

Query:  -QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
         +YGD++QIDGFDVDYG  +  TLRLG++ TY+LNKQTPNRQIWLSSP+SGP RFDWD+NSQ WIYRRNKANL  LLETEL QLCGEPIDL
Subjt:  -QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

A0A1S3BJ48 Ferroxidase5.6e-3750.78Show/hide
Query:  MAAKLLPPLRKLPRMLKMPSSSS-------YL------LLNLSDNPNQFPSSGFLRRGFSRPF-------------------------------------
        MA KLL PL KL R+LK+PSSSS       YL      L+++S+N +QF    F +   SRP                                      
Subjt:  MAAKLLPPLRKLPRMLKMPSSSS-------YL------LLNLSDNPNQFPSSGFLRRGFSRPF-------------------------------------

Query:  ---QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
           +YGD++QIDGFDVDYG  +  TLRLG++ TY+LNKQTPNRQIWLSSP+SGP RFDWD+NS+AWIYRRNKANL  LLETEL QLCGEPI+L
Subjt:  ---QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

A0A6J1CG34 Ferroxidase4.9e-4153.57Show/hide
Query:  MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRRGFSRPF----------------------------------
        MA KLL PLRKL R+LK+PSSSSY                 LL +SDN +QF    F R   SRP                                   
Subjt:  MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRRGFSRPF----------------------------------

Query:  ------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
              +YGDD+QIDGFDVDYG  +  TL+LGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD+NSQAWIYRRNKANL RLLETELA+LCGEPI L
Subjt:  ------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

A0A6J1G6C8 Ferroxidase8.6e-3852.28Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               +YGDD+QIDGFDVDYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL RLLETEL QLCGEPI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

A0A6J1I2E7 Ferroxidase7.1e-4053.81Show/hide
Query:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------
        MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R   SRP                                  
Subjt:  MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLRRGFSRPF---------------------------------

Query:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
               +YGDD+QIDGFDVDYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRRNKANL RLLETELAQLCGEPI+L
Subjt:  -------QYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

SwissProt top hitse value%identityAlignment
O35943 Frataxin, mitochondrial2.2e-1443.37Show/hide
Query:  IDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
        ++ +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +     +DL
Subjt:  IDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

Q05B87 Frataxin, mitochondrial2.6e-1546.34Show/hide
Query:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
        + +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL TEL Q     +DL
Subjt:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

Q16595 Frataxin, mitochondrial2.9e-1443.9Show/hide
Query:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
        + +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +     +DL
Subjt:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

Q54C45 Frataxin, mitochondrial1.9e-1347.37Show/hide
Query:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLC
        +GF+V+ G     T+ +G+  TY++NKQTPNRQIW SSP+SGP RFD+D   + W+  R+   L +LL +E+  LC
Subjt:  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLC

Q9ZR07 Frataxin, mitochondrial8.9e-3268.54Show/hide
Query:  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
        YGD++QIDGFD+DYG  +  TL+LG + TY+LNKQTPNRQIW+SSPVSGP RFDWD ++ AWIYRR +A L +LLE EL  LCGEPI L
Subjt:  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL

Arabidopsis top hitse value%identityAlignment
AT4G03240.1 frataxin homolog6.3e-3368.54Show/hide
Query:  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL
        YGD++QIDGFD+DYG  +  TL+LG + TY+LNKQTPNRQIW+SSPVSGP RFDWD ++ AWIYRR +A L +LLE EL  LCGEPI L
Subjt:  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGCTCCTTCCTCCTCTGCGTAAGCTTCCAAGGATGTTGAAGATGCCGTCTTCTTCATCATATCTTCTCCTAAATCTTTCCGATAATCCTAATCAATTTCC
ATCCTCTGGATTTCTTCGGCGAGGATTCTCCAGGCCCTTCCAATATGGTGATGATATCCAAATTGATGGCTTTGACGTTGACTATGGGGTTACTATGAGTACGACCTTGA
GGCTCGGCGATATCAGCACTTACATCTTGAACAAACAAACACCGAACAGACAAATTTGGCTGTCATCCCCTGTGAGTGGTCCGTTCAGGTTTGATTGGGATGAGAACTCG
CAGGCTTGGATTTATAGGCGAAACAAAGCGAACCTGTCGAGACTTCTAGAAACTGAATTGGCGCAACTCTGTGGTGAGCCAATTGATCTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAAGCTCCTTCCTCCTCTGCGTAAGCTTCCAAGGATGTTGAAGATGCCGTCTTCTTCATCATATCTTCTCCTAAATCTTTCCGATAATCCTAATCAATTTCC
ATCCTCTGGATTTCTTCGGCGAGGATTCTCCAGGCCCTTCCAATATGGTGATGATATCCAAATTGATGGCTTTGACGTTGACTATGGGGTTACTATGAGTACGACCTTGA
GGCTCGGCGATATCAGCACTTACATCTTGAACAAACAAACACCGAACAGACAAATTTGGCTGTCATCCCCTGTGAGTGGTCCGTTCAGGTTTGATTGGGATGAGAACTCG
CAGGCTTGGATTTATAGGCGAAACAAAGCGAACCTGTCGAGACTTCTAGAAACTGAATTGGCGCAACTCTGTGGTGAGCCAATTGATCTTTGTTGA
Protein sequenceShow/hide protein sequence
MAAKLLPPLRKLPRMLKMPSSSSYLLLNLSDNPNQFPSSGFLRRGFSRPFQYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENS
QAWIYRRNKANLSRLLETELAQLCGEPIDLC