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Sed0008712 (gene) of Chayote v1 genome

Gene IDSed0008712
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG11:24204135..24204667
RNA-Seq ExpressionSed0008712
SyntenySed0008712
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060891.1 putative calcium-binding protein CML36 [Cucumis melo var. makuwa]6.4e-2654.03Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQ+PLS KEA  VL++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+  DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKTNKK
        DGD LISE EL KLIDY ++TN +
Subjt:  DGDNLISEEELEKLIDYFEKTNKK

XP_008445562.1 PREDICTED: probable calcium-binding protein CML36 [Cucumis melo]1.9e-2553.23Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQ+PLS KEA  V ++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+  DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKTNKK
        DGD LISE EL KLIDY ++TN +
Subjt:  DGDNLISEEELEKLIDYFEKTNKK

XP_022951882.1 probable calcium-binding protein CML15 [Cucurbita moschata]8.4e-4270.63Show/hide
Query:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG
        M+++  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+REEIKEIFLEHDIDGDG L++ EVTKAF+ +G+ L  +KA HG+  AD DG
Subjt:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG

Query:  DNLISEEELEKLIDYFEKTNKKGLKR
        D +ISEEEL+KL+DYFEKTNKK LKR
Subjt:  DNLISEEELEKLIDYFEKTNKKGLKR

XP_023002890.1 probable calcium-binding protein CML15 [Cucurbita maxima]1.1e-4170.63Show/hide
Query:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG
        M++L  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+RE+IKEIFLEHDIDGDG L+++E++KAF+ +G+ L  +KA HGM  AD DG
Subjt:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG

Query:  DNLISEEELEKLIDYFEKTNKKGLKR
        D LISEEEL+KL+DYFEKTNKK LKR
Subjt:  DNLISEEELEKLIDYFEKTNKKGLKR

XP_038885760.1 probable calcium-binding protein CML36 [Benincasa hispida]8.1e-2957.94Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RP----SKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQRPLS KEA  VL +RD N DGV+DK+ELM DL     +P      + L+REEI+EIF   DIDGDG+LN NE+T+AF  +G+  P++KA++ M  ADD
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RP----SKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKTNKKGL
        DGD LISE EL KLIDY EKTN++ L
Subjt:  DGDNLISEEELEKLIDYFEKTNKKGL

TrEMBL top hitse value%identityAlignment
A0A0A0LP46 Uncharacterized protein5.9e-2554.55Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQ+PLS KEA  +L +RD N DGV+DK+ELM DL     +PS     ++L+REEIKEIF+  DIDGDG+L+ NEV +AF  +G+  P+ KA++ M  AD+
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKT
        DGD  ISE EL KLIDY ++T
Subjt:  DGDNLISEEELEKLIDYFEKT

A0A1S3BD12 probable calcium-binding protein CML369.1e-2653.23Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQ+PLS KEA  V ++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+  DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKTNKK
        DGD LISE EL KLIDY ++TN +
Subjt:  DGDNLISEEELEKLIDYFEKTNKK

A0A5A7V530 Putative calcium-binding protein CML363.1e-2654.03Show/hide
Query:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD
        LQ+PLS KEA  VL++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+  DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+
Subjt:  LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADD

Query:  DGDNLISEEELEKLIDYFEKTNKK
        DGD LISE EL KLIDY ++TN +
Subjt:  DGDNLISEEELEKLIDYFEKTNKK

A0A6J1GIW2 probable calcium-binding protein CML154.1e-4270.63Show/hide
Query:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG
        M+++  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+REEIKEIFLEHDIDGDG L++ EVTKAF+ +G+ L  +KA HG+  AD DG
Subjt:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG

Query:  DNLISEEELEKLIDYFEKTNKKGLKR
        D +ISEEEL+KL+DYFEKTNKK LKR
Subjt:  DNLISEEELEKLIDYFEKTNKKGLKR

A0A6J1KQ84 probable calcium-binding protein CML155.3e-4270.63Show/hide
Query:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG
        M++L  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+RE+IKEIFLEHDIDGDG L+++E++KAF+ +G+ L  +KA HGM  AD DG
Subjt:  MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDG

Query:  DNLISEEELEKLIDYFEKTNKKGLKR
        D LISEEEL+KL+DYFEKTNKK LKR
Subjt:  DNLISEEELEKLIDYFEKTNKKGLKR

SwissProt top hitse value%identityAlignment
P05933 Calmodulin6.3e-0833.33Show/hide
Query:  SAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEK
        +A E +D++   D + +G ID  E +  + R  K   + EE++E F   D DG+GY+ + E+T   +SLG  L   +    +  AD DGD +I+ EE  +
Subjt:  SAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEK

Query:  LI
        +I
Subjt:  LI

P24044 Calmodulin1.5e-0632.43Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   DT+ +G ID  E +  + R  K   + EE+ E F   D DGDGY++ +E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

P62184 Calmodulin7.0e-0732.43Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   D + DG ID  E +  + R  K   S EEI+E F   D DGDG+++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         ++ EE  K++
Subjt:  LISEEELEKLI

P62203 Calmodulin1.5e-0632.43Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   DT+ +G ID  E +  + R  K   + EE+ E F   D DGDGY++ +E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

P84339 Calmodulin1.5e-0633.33Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P S  E ED++   D + +G ID  E +  + R  +   S EEIKE F   D DG+GY++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

Arabidopsis top hitse value%identityAlignment
AT2G27030.1 calmodulin 54.6e-0630.63Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D D +G+++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

AT2G27030.2 calmodulin 54.6e-0630.63Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D D +G+++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

AT2G27030.3 calmodulin 54.6e-0630.63Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D D +G+++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

AT2G41110.1 calmodulin 24.6e-0630.63Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN
        + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D D +G+++  E+    ++LG  L   + +  +  AD DGD 
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDN

Query:  LISEEELEKLI
         I+ EE  K++
Subjt:  LISEEELEKLI

AT4G14640.1 calmodulin 82.7e-0629.46Show/hide
Query:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLS--REEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGD
        + ++ Q P + +E  D++   D++++G I+  E + +L   KLQ S   EE+KE F   D D +GY++ +E++    +LG  L   +    +  AD DGD
Subjt:  LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLS--REEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGD

Query:  NLISEEELEKLI
          ++ +E  K++
Subjt:  NLISEEELEKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACCTTCACAATATACTCCAAAGGCCTCTTTCCGCAAAGGAAGCTGAAGATGTGCTCAGGCTGCGTGATACCAACAACGATGGGGTCATTGATAAGAGAGAGCT
GATGAGAGACTTGAGGCCCTCCAAACTACAACTCTCTCGTGAGGAGATCAAAGAAATTTTCCTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTAAACGAGGTAA
CCAAGGCTTTCAGTAGTTTGGGCGCCCTCCTACCGATGTATAAAGCTAATCACGGCATGAATTTTGCTGATGATGATGGTGATAATCTCATTAGCGAGGAGGAACTCGAA
AAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTCTAAAGAGAGGGCCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
CAACTTCTATCAAAAACCCTAAGCCAAAACAAGATGGACAACCTTCACAATATACTCCAAAGGCCTCTTTCCGCAAAGGAAGCTGAAGATGTGCTCAGGCTGCGTGATAC
CAACAACGATGGGGTCATTGATAAGAGAGAGCTGATGAGAGACTTGAGGCCCTCCAAACTACAACTCTCTCGTGAGGAGATCAAAGAAATTTTCCTCGAGCACGACATTG
ATGGCGATGGTTATCTCAATTTAAACGAGGTAACCAAGGCTTTCAGTAGTTTGGGCGCCCTCCTACCGATGTATAAAGCTAATCACGGCATGAATTTTGCTGATGATGAT
GGTGATAATCTCATTAGCGAGGAGGAACTCGAAAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTCTAAAGAGAGGGCCTCGTTGAGTGTTGTTTAATACGTA
TGGTGATATAATAAAAGTGGTCGACTTACTATCTAGTATCTAATCTGCTGTCTTTGCTTTTTTCAATTCAAATATAGACAAGAAAAATTTCCA
Protein sequenceShow/hide protein sequence
MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELE
KLIDYFEKTNKKGLKRGPR