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Sed0008713 (gene) of Chayote v1 genome

Gene IDSed0008713
OrganismSechium edule (Chayote v1)
Descriptionprotein BIC1-like
Genome locationLG14:3199654..3201187
RNA-Seq ExpressionSed0008713
SyntenySed0008713
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027199.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3474.17Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNS-TAVTAAGALRILN
        SP+NNS TA  AAGALRILN
Subjt:  SPSNNS-TAVTAAGALRILN

XP_022962648.1 protein BIC1-like [Cucurbita moschata]1.1e-3372.5Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNSTAVTA-AGALRILN
        SP+NNS A +A AG+LRILN
Subjt:  SPSNNSTAVTA-AGALRILN

XP_022972606.1 protein BIC1-like [Cucurbita maxima]6.4e-3473.33Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIV ARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNS-TAVTAAGALRILN
        SP+NNS TA  AAGALRILN
Subjt:  SPSNNS-TAVTAAGALRILN

XP_023518112.1 protein BIC1-like [Cucurbita pepo subsp. pepo]1.7e-3474.17Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNS-TAVTAAGALRILN
        SP+NNS TA  AAGALRILN
Subjt:  SPSNNS-TAVTAAGALRILN

XP_038882952.1 protein BIC2-like [Benincasa hispida]5.4e-3371.32Show/hide
Query:  MTLQSPLLKPNSKL-----LPDGHQS---NDDQKLDI--SASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRAL
        MTL SP  KPNS L     L +  QS   +   KLD   SA   EESGRE+LKRHRVAVAGQVWIP+KWGKEE LKDWIDGSAFEASLFPSGIVSARRAL
Subjt:  MTLQSPLLKPNSKL-----LPDGHQS---NDDQKLDI--SASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRAL

Query:  ARDAMRLSPSNNSTAVTA---AGALRILN
        ARDA RLSP+NN+ A TA   AGALRILN
Subjt:  ARDAMRLSPSNNSTAVTA---AGALRILN

TrEMBL top hitse value%identityAlignment
A0A0A0KFC4 Uncharacterized protein7.4e-2866.41Show/hide
Query:  MTLQSPLLKPNSKL-LP-DGHQSNDDQKL---DISASVGE--ESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARD
        MTL SP   PNS L LP   H    DQ L   D    + E  ES RE+LKRHR+AVAG VWIP+KWGKEE LKDWIDGSAFEASLF SGIVSAR ALARD
Subjt:  MTLQSPLLKPNSKL-LP-DGHQSNDDQKL---DISASVGE--ESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARD

Query:  AMRLSPSNN-----STAVTAAGALRILN
        A RLSP+NN     +TA  AAGALRILN
Subjt:  AMRLSPSNN-----STAVTAAGALRILN

A0A2G5CAG0 Uncharacterized protein9.1e-1855.79Show/hide
Query:  QSPLLKPNSKLLPDGHQSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLS
        Q  L +P S L+    +S D   L++       SGRE+LKRHR  VAGQVWIP+ WG+EELLKDWID SAF+ASL PSG++SAR AL ++A R S
Subjt:  QSPLLKPNSKLLPDGHQSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLS

A0A5D3C697 Protein BIC1 isoform X12.3e-2964.57Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQSNDDQKLDISASVGE--------ESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR
        MTL SP   PNS L    H     Q+ D + S  +        ES RE+LKRHR+AVAG VWIP+KWGKEE LKDWIDGSAFEASLFPSGIVSAR ALAR
Subjt:  MTLQSPLLKPNSKLLPDGHQSNDDQKLDISASVGE--------ESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR

Query:  DAMRLSPSNN---STAVTAAGALRILN
        DA RLSP+NN   +TA  AAGALRILN
Subjt:  DAMRLSPSNN---STAVTAAGALRILN

A0A6J1HFE1 protein BIC1-like5.3e-3472.5Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNSTAVTA-AGALRILN
        SP+NNS A +A AG+LRILN
Subjt:  SPSNNSTAVTA-AGALRILN

A0A6J1I6F1 protein BIC1-like3.1e-3473.33Show/hide
Query:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL
        M L +  LKP S LLPD  +S   +DDQKL       EE+G E+LKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIV ARRALAR+A R 
Subjt:  MTLQSPLLKPNSKLLPDGHQS---NDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRL

Query:  SPSNNS-TAVTAAGALRILN
        SP+NNS TA  AAGALRILN
Subjt:  SPSNNS-TAVTAAGALRILN

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC11.8e-1550Show/hide
Query:  QSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLSPSN
        QS ++ ++D        +GRE+LK+HR  +AG+VWIPE WG+EELLKDWID S F+  L P+GI SAR AL  +A R + ++
Subjt:  QSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLSPSN

Q9M280 Protein BIC27.9e-1158.62Show/hide
Query:  SGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDA
        SGR++LKRHR  VAG+V IP+ WGKE LL  W+D S F+A+   S IVSAR AL  D+
Subjt:  SGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDA

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein5.6e-1258.62Show/hide
Query:  SGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDA
        SGR++LKRHR  VAG+V IP+ WGKE LL  W+D S F+A+   S IVSAR AL  D+
Subjt:  SGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDA

AT3G52740.1 unknown protein1.3e-1650Show/hide
Query:  QSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLSPSN
        QS ++ ++D        +GRE+LK+HR  +AG+VWIPE WG+EELLKDWID S F+  L P+GI SAR AL  +A R + ++
Subjt:  QSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLSPSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCCAAAGCCCTCTTCTCAAACCCAACTCCAAACTATTGCCTGATGGTCATCAAAGTAATGATGATCAGAAGCTTGACATCTCCGCCTCGGTGGGGGAGGAGAG
CGGGCGGGAGCAGCTGAAGCGCCACCGTGTTGCTGTGGCGGGGCAGGTTTGGATCCCAGAGAAATGGGGCAAGGAAGAGCTTTTGAAGGATTGGATCGATGGCTCCGCAT
TTGAAGCCTCCTTGTTTCCCTCGGGGATTGTGTCGGCTCGCCGAGCTTTGGCCCGGGACGCCATGAGATTGTCCCCGAGTAACAACTCTACCGCGGTCACCGCTGCTGGA
GCTTTGAGAATATTGAACATAGCTTTCAAAAACTTATTTTTGTTTTTAAAGGTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCTCCAAAGCCCTCTTCTCAAACCCAACTCCAAACTATTGCCTGATGGTCATCAAAGTAATGATGATCAGAAGCTTGACATCTCCGCCTCGGTGGGGGAGGAGAG
CGGGCGGGAGCAGCTGAAGCGCCACCGTGTTGCTGTGGCGGGGCAGGTTTGGATCCCAGAGAAATGGGGCAAGGAAGAGCTTTTGAAGGATTGGATCGATGGCTCCGCAT
TTGAAGCCTCCTTGTTTCCCTCGGGGATTGTGTCGGCTCGCCGAGCTTTGGCCCGGGACGCCATGAGATTGTCCCCGAGTAACAACTCTACCGCGGTCACCGCTGCTGGA
GCTTTGAGAATATTGAACATAGCTTTCAAAAACTTATTTTTGTTTTTAAAGGTTGGTTAG
Protein sequenceShow/hide protein sequence
MTLQSPLLKPNSKLLPDGHQSNDDQKLDISASVGEESGREQLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGIVSARRALARDAMRLSPSNNSTAVTAAG
ALRILNIAFKNLFLFLKVG