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Sed0008731 (gene) of Chayote v1 genome

Gene IDSed0008731
OrganismSechium edule (Chayote v1)
Descriptionprotein SPIRAL1-like 5
Genome locationLG07:13551633..13553333
RNA-Seq ExpressionSed0008731
SyntenySed0008731
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]1.6e-4087Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD H+ N   +PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]9.3e-4186.27Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]7.4e-3883.17Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDDQP KP V +V+LPPPYGIDI+PD    N   +PKQLVS NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]6.2e-3782.18Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDD+P KP V KVVLPPPYGIDI PD   QNNP    +  ++NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]6.6e-3985.29Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD ++ NN    PKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

TrEMBL top hitse value%identityAlignment
A0A0A0KUV0 Uncharacterized protein7.7e-4187Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD H+ N   +PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

A0A1S3BTQ0 protein SPIRAL1-like 54.5e-4186.27Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A5D3CZ49 Protein SPIRAL1-like 54.5e-4186.27Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1C4I1 protein SPIRAL1-like 53.6e-3883.17Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDDQP KP V +V+LPPPYGIDI+PD    N   +PKQLVS NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

A0A6J1J7K0 protein SPIRAL1-like 53.0e-3782.18Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDD+P KP V KVVLPPPYGIDI PD   QNNP    +  ++NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 14.4e-1752.29Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPKQL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGG
        M RG S GGG+SSLGYLFG+ + P KP +     P     P   D +P H      N  KQ+       S NNY RA GQN+GNF+TDRPSTKV +APGG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPKQL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGG

Query:  DSSLGYLFG
         SSL YLFG
Subjt:  DSSLGYLFG

Q2QQ99 Protein SPIRAL1-like 37.0e-1551.55Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        M RG S GGG+SSLGYLFG  + P     P  V  P      +     +  P  + S+  NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Q7Y1L9 Protein SPIRAL1-like 16.7e-1850.88Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQP---IKPHVPKVVLPPPYGIDIT--------PDHHHQNNPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P    KP       P P              P     +  KQ+        SNNNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQP---IKPHVPKVVLPPPYGIDIT--------PDHHHQNNPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK

Query:  SAPGGDSSLGYLFG
        +APGG SSLGYLFG
Subjt:  SAPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 54.2e-2863.73Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGS+GGG+SSLGYLFG+D++    P  P  PK    PPYG+D T +  H+ + K  +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

Q9LE54 Protein SPIRAL1-like 23.7e-1652.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P  L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like13.1e-1852.29Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPKQL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGG
        M RG S GGG+SSLGYLFG+ + P KP +     P     P   D +P H      N  KQ+       S NNY RA GQN+GNF+TDRPSTKV +APGG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPKQL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGG

Query:  DSSLGYLFG
         SSL YLFG
Subjt:  DSSLGYLFG

AT1G69230.1 SPIRAL1-like22.6e-1752.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P  L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT1G69230.2 SPIRAL1-like22.6e-1752.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P  L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT2G03680.1 spiral13.5e-1445.22Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPIKP-HVPKVV--------LPPPYGIDIT----------PDHHHQNNPKQLVSN-NNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSL YLFG D    KP   P+           PP   +  T          P   ++  P  + +  NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPIKP-HVPKVV--------LPPPYGIDIT----------PDHHHQNNPKQLVSN-NNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLF
        V +APGG SSL YLF
Subjt:  VKSAPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like53.0e-2963.73Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGS+GGG+SSLGYLFG+D++    P  P  PK    PPYG+D T +  H+ + K  +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTGGGGTATCTTTTTGGTAATGATGATCAGCCCATAAAGCCTCATGTCCCCAAAGTTGTTCTTCCTCC
TCCTTATGGAATTGATATCACTCCTGATCATCATCATCAAAACAATCCTAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCATGGCCAAAACTCTGGCAACTTCA
TAACGGACCGTCCATCAACCAAGGTGAAATCTGCTCCTGGTGGTGATTCATCCTTAGGGTATCTGTTTGGAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
CACACTTCACACTCATATAGGGAAATTCATTTTATATATATATAAAAACAACCAAGATTAGGGTTTGGAGCAGTTTGTTTTGTGTAGCATTTTTGGATCAGATCTAGTCA
GAAAACCAGTATATGATGAGCAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTGGGGTATCTTTTTGGTAATGATGATCAGCCCATAAAGCCTCATGTCCCCAAAGT
TGTTCTTCCTCCTCCTTATGGAATTGATATCACTCCTGATCATCATCATCAAAACAATCCTAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCATGGCCAAAACT
CTGGCAACTTCATAACGGACCGTCCATCAACCAAGGTGAAATCTGCTCCTGGTGGTGATTCATCCTTAGGGTATCTGTTTGGAGATAAGTGATTGTGATTAGTTTGTTTT
CAATGCTGAATATATTGGAAGTGAGTTCTAAAGGGTATGCTTTAGTGTGTGTGGTTTTCTAAATAAATGTGTGCAATTATTATGTATCTTAAGAAACATATAGCCTGGAT
TTGTGCAAACAGTATGATATGCTTTAATTTTAGCAGATATTATAATGTATTGAATAGAATCATGAACTTGTAGTTTGATTATG
Protein sequenceShow/hide protein sequence
MMSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK