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Sed0008758 (gene) of Chayote v1 genome

Gene IDSed0008758
OrganismSechium edule (Chayote v1)
DescriptionBric-a-brac protein
Genome locationLG03:25731191..25734924
RNA-Seq ExpressionSed0008758
SyntenySed0008758
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902886.1 PREDICTED: uncharacterized protein LOC103500918 [Cucumis melo]1.6e-1977.42Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
        MG+WLNPLPRG L TSACFF+ GVS FAAGA+LS+LN+ PQQARTKAR DFVR+RLR+RH G
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
XP_022132375.1 uncharacterized protein LOC111005249 [Momordica charantia]5.7e-2081.67Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG+WL+PLPRG LATSACFFVAGVSFFA GAY S+LN+APQQARTKAR DFV++RLR+RH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
XP_022962859.1 uncharacterized protein LOC111463226 [Cucurbita moschata]8.2e-1980Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG WLNPLPRG L TSAC+FVAG S FA GAYLS++N+ PQQARTKARSDFVR+RLRRRH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
XP_023517718.1 uncharacterized protein LOC111781390 [Cucurbita pepo subsp. pepo]1.3e-1981.67Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG+WLNPLPRG L TSAC+FVAG SFF  GAYLS++NV PQQARTKARSDFVR+RLRRRH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
XP_038880929.1 uncharacterized protein LOC120072605 [Benincasa hispida]7.9e-2288.33Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG+WLNPLPRG LATSACFFVAGVSFFAAGAYLSFLN+APQQARTKAR DFV++RLR+RH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
TrEMBL top hitse value%identityAlignment
A0A0A0KEZ9 Uncharacterized protein3.1e-1669.35Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
        MG+WLNPLP G L  SAC F+ G+S FAAGA+LS+LN+ PQQARTKAR DFV++RLRRR  G
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
A0A1S4E3S6 uncharacterized protein LOC1035009188.0e-2077.42Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
        MG+WLNPLPRG L TSACFF+ GVS FAAGA+LS+LN+ PQQARTKAR DFVR+RLR+RH G
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
A0A5D3C6A0 Uncharacterized protein8.0e-2077.42Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
        MG+WLNPLPRG L TSACFF+ GVS FAAGA+LS+LN+ PQQARTKAR DFVR+RLR+RH G
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG
A0A6J1BSA7 uncharacterized protein LOC1110052492.7e-2081.67Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG+WL+PLPRG LATSACFFVAGVSFFA GAY S+LN+APQQARTKAR DFV++RLR+RH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
A0A6J1HI96 uncharacterized protein LOC1114632264.0e-1980Show/hide
Query:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
        MG WLNPLPRG L TSAC+FVAG S FA GAYLS++N+ PQQARTKARSDFVR+RLRRRH
Subjt:  MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11591.1 unknown protein1.8e-1161.54Show/hide
Query:  PLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRR
        P  R  L  S  FF AGVS F AGAYLS  N++PQQAR KAR+DFV+DR+R+
Subjt:  PLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGTGGCTGAACCCTCTCCCCCGCGGGAACCTGGCAACCAGCGCCTGCTTCTTCGTCGCCGGCGTCTCCTTCTTCGCCGCCGGAGCTTACCTCTCTTTCCTCAA
CGTTGCCCCTCAGCAGGCTCGCACCAAAGCTCGCTCCGATTTTGTCAGGGACCGCCTCCGACGGCGTCACGGCGGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAGGATTGTATTACGAGTTCATTAGGATTGTATTTACGGACGTTAGGTTAGGCATACCGTATAAGAAAGAAAGGGAGCTGTGGGAAATGGGAGTGTGGCTGAACCCTCT
CCCCCGCGGGAACCTGGCAACCAGCGCCTGCTTCTTCGTCGCCGGCGTCTCCTTCTTCGCCGCCGGAGCTTACCTCTCTTTCCTCAACGTTGCCCCTCAGCAGGCTCGCA
CCAAAGCTCGCTCCGATTTTGTCAGGGACCGCCTCCGACGGCGTCACGGCGGTTGACATCCAAAATCCATGTCATTACAGAATTCTCAAATTCAGAGAACTTTGTTGTAT
TTTGAAGATGGCATGAAAGGGACAAACAAATTTAGAGCTTGGTACTGAGGTTTCAGGCGCTTGGGCGCCAAATAAGTTGGTGCTTAGGCATTATGAATTTCTGTTCATAT
TTATTTAGTTGATTTTTAGGGGTTTTCGACACTTATTCTTTGATCATATGCTTCATTTTTCTTTATTTTTTTCCTTTTACTTTGATATTGAAATAATTAGTTTCAATCAC
GTGGTATATGCTTCTTTTATTTTATTTTTGAAACGGTACATGTTTCTTATTTTTTTTTGAAACGGTATATGTTTCTTTTATTACTGTGAC
Protein sequenceShow/hide protein sequence
MGVWLNPLPRGNLATSACFFVAGVSFFAAGAYLSFLNVAPQQARTKARSDFVRDRLRRRHGG