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Sed0008767 (gene) of Chayote v1 genome

Gene IDSed0008767
OrganismSechium edule (Chayote v1)
DescriptionJHL25P11.1 protein
Genome locationLG11:32270495..32271517
RNA-Seq ExpressionSed0008767
SyntenySed0008767
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602743.1 hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4676.26Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLRSSR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLLQRYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVYEC DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

XP_022152501.1 uncharacterized protein LOC111020213 [Momordica charantia]5.4e-4476.3Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-EEEIGLLQRYLDDQL
        MLAT AAAAASSWL SSR RF F+LLCSPLLVP+FCATFPFICA+ELCIR+AR R S   RDSPE ERLRRCEEGG   ALP + EEEIGLLQRYLDDQL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-EEEIGLLQRYLDDQL

Query:  LLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        LLVRSVYEC D  ++   DARFC+ +NSN+IPLLG
Subjt:  LLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

XP_022962190.1 uncharacterized protein LOC111462719 [Cucurbita moschata]1.5e-4676.26Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLRSSR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLLQRYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVYEC DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

XP_022990172.1 uncharacterized protein LOC111487144 [Cucurbita maxima]1.8e-4474.1Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLR SR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLL RYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVY C DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

XP_023550754.1 uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]1.5e-4676.26Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLRSSR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLLQRYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVYEC DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

TrEMBL top hitse value%identityAlignment
A0A2P5A925 Uncharacterized protein6.4e-2753.24Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRR----DSPETERLRRCEEG---GYRPALPAEEEEIGLLQR
        + A AAA+++SSWLRS RIR+ FL LCSP+L+P  CATFP +CA ELC+R+ RRR    +R    DS + +RLRRCEEG   G R  L  E EE+GLLQR
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRR----DSPETERLRRCEEG---GYRPALPAEEEEIGLLQR

Query:  YLDDQLLLVRSVYECADCGDEFDARFCEVRNSNLIPLLG
        YL+DQL+LV S+Y+C +  D  D    E  +S L+P  G
Subjt:  YLDDQLLLVRSVYECADCGDEFDARFCEVRNSNLIPLLG

A0A5E4EVK4 PREDICTED: transmembrane3.5e-2556.3Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRR-RDSPETERLRRCEEGGYRPALPAEEEEIGLLQRYLDDQL
        ++  AAA+++++WLR+ R R+ FLL+CSP+L+P  CATFPF+CA ELC+R+ RRRI T    D    ERLRRCEEG        E EE+GLLQRYL+DQL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRR-RDSPETERLRRCEEGGYRPALPAEEEEIGLLQRYLDDQL

Query:  LLVRSVYECADCGDEFDAR
        LLV SVY+C D  D+ D R
Subjt:  LLVRSVYECADCGDEFDAR

A0A6J1DHX6 uncharacterized protein LOC1110202132.6e-4476.3Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-EEEIGLLQRYLDDQL
        MLAT AAAAASSWL SSR RF F+LLCSPLLVP+FCATFPFICA+ELCIR+AR R S   RDSPE ERLRRCEEGG   ALP + EEEIGLLQRYLDDQL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-EEEIGLLQRYLDDQL

Query:  LLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        LLVRSVYEC D  ++   DARFC+ +NSN+IPLLG
Subjt:  LLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

A0A6J1HEC7 uncharacterized protein LOC1114627197.3e-4776.26Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLRSSR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLLQRYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVYEC DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

A0A6J1JHX7 uncharacterized protein LOC1114871448.9e-4574.1Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL
        MLAT AAAAAS WLR SR RFF LLLCSPLLVP+FCATFP ICA+ELCIR+AR RI    RDSPE+ERLRRCEEGG R ALP +     EE+IGLL RYL
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAE-----EEEIGLLQRYL

Query:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG
        DDQLLLVRSVY C DC D+   DARFC++ NSNLIPLLG
Subjt:  DDQLLLVRSVYECADCGDEF--DARFCEVRNSNLIPLLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G35430.1 unknown protein9.8e-2052.34Show/hide
Query:  WLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETE-RLRRCEE----GGYRPALPAEEEEIGLLQRYLDDQLLLVRSVYE
        WLR+ R RF F LLCSPLL+P+ CA+ P +CA+E+  R+  R     +  + E + RLRRCEE    GG+      E EE GLLQRYL+DQL+LVRSVY 
Subjt:  WLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETE-RLRRCEE----GGYRPALPAEEEEIGLLQRYLDDQLLLVRSVYE

Query:  CADCGDE
          DCG+E
Subjt:  CADCGDE

AT4G09170.1 unknown protein6.0e-0937.19Show/hide
Query:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARR--------RISTRRRDSPETERLRRCEEGGYRPALPAEEEEIGLLQ
        ++ T A+  ++ W      R  FL+LCSPLL    C + P +CA+E+  R+  R         +S    D  +  RLR+CEE G+      E EE GLL 
Subjt:  MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARR--------RISTRRRDSPETERLRRCEEGGYRPALPAEEEEIGLLQ

Query:  RYLDDQLLLVRSVYECADCGD
        RYLD+QL L R++++  D GD
Subjt:  RYLDDQLLLVRSVYECADCGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCCACCGCCGCCGCCGCCGCCGCTTCTTCTTGGCTTCGTTCCAGCCGAATCCGCTTCTTCTTTCTCCTGCTTTGTTCTCCTCTTCTCGTTCCCTTATTTTGCGC
TACTTTCCCCTTCATCTGCGCCCTAGAGCTCTGCATCCGCATCGCTCGTCGCAGGATCAGCACACGCCGTCGCGATTCGCCGGAAACCGAACGGTTGCGGCGATGCGAGG
AAGGCGGCTACCGGCCGGCGCTGCCGGCGGAGGAGGAGGAGATCGGCCTGTTACAGAGGTACTTAGATGATCAGCTTTTGCTCGTTCGATCTGTTTATGAATGTGCCGAT
TGTGGCGACGAATTCGATGCTCGATTTTGTGAAGTTCGAAACAGTAATTTGATTCCACTGTTGGGTTGA
mRNA sequenceShow/hide mRNA sequence
TTATAATATTCATTAACTATCCAAAAAAGTAATAGAACAGAAAATAAAAATAAAAAATAATCTGAAATGAAATACCAAATCGGTAATTAGTATAATTAAACAATGTCTGA
CATTCTAAGCACCATTTTAATTAATTTAATTAAATAATTAATCCCCTAATTATATAATAAGAAAACAGGTTTTAGGTTTTGTTCATCGTGGCCCAGATTGGCAGCCATAG
CCAAATCCCCAAATTCCTCTTCTCACCATGAATTCCATCGTCCTAGCCGGATCTCTCCGATCCACCGCCGCACTAATCCGCCGGTCATCATGTTAGCCACCGCCGCCGCC
GCCGCCGCTTCTTCTTGGCTTCGTTCCAGCCGAATCCGCTTCTTCTTTCTCCTGCTTTGTTCTCCTCTTCTCGTTCCCTTATTTTGCGCTACTTTCCCCTTCATCTGCGC
CCTAGAGCTCTGCATCCGCATCGCTCGTCGCAGGATCAGCACACGCCGTCGCGATTCGCCGGAAACCGAACGGTTGCGGCGATGCGAGGAAGGCGGCTACCGGCCGGCGC
TGCCGGCGGAGGAGGAGGAGATCGGCCTGTTACAGAGGTACTTAGATGATCAGCTTTTGCTCGTTCGATCTGTTTATGAATGTGCCGATTGTGGCGACGAATTCGATGCT
CGATTTTGTGAAGTTCGAAACAGTAATTTGATTCCACTGTTGGGTTGATAATCGATTCACTTTTTTGTTGTTGTTGTTTAGTGTACATGCCACTGAATTGTTGAAATTTT
TATAGATTTCTGATTGGTTTGGTGAAATTGTTCTTGGATTAGAATTTGGGATGGATCTTAATTTGTTGTGGAGCCAAAAAATGGAAAATGTCACAAAGGGGAAGTTTGAC
CAGGTCATCTGCTTTAGTTTATATTATATAGCCTTTGGGAATATGGTACCAATTGGCTTGGCCAGATAACGGGCACCTCGACTCGATAAATATAGTCATTATAGATTGAA
TTCTATCATTTCAAAATCTTTTTTTTTTATCAC
Protein sequenceShow/hide protein sequence
MLATAAAAAASSWLRSSRIRFFFLLLCSPLLVPLFCATFPFICALELCIRIARRRISTRRRDSPETERLRRCEEGGYRPALPAEEEEIGLLQRYLDDQLLLVRSVYECAD
CGDEFDARFCEVRNSNLIPLLG