CuGenDBv2

Gene ID	Sed0008793
Organism	Sechium edule (Chayote v1)
Description	cleavage stimulating factor 64
Genome location	LG08:35707433..35711821
RNA-Seq Expression	Sed0008793
Synteny	Sed0008793
Gene Ontology terms	GO:0009749 - response to glucose (biological process) GO:0031124 - mRNA 3'-end processing (biological process) GO:0035194 - posttranscriptional gene silencing by RNA (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR025742 - Cleavage stimulation factor subunit 2, hinge domain IPR026896 - Transcription termination and cleavage factor, C-terminal domain IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008458086.1 PREDICTED: extensin [Cucumis melo]

4.0e-183

87.22

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+QPSA QHSQPST   QQSN++PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTSA PLA PRKQYQNQ +MPISSTTLPT NIQP+  PLIPLQTPQH KGF++PQANP+SVPQPSQ+PSVSPILPSAAQPPLLHQP ISTASM
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV
        QLQ P+QTA++ HLP QAPLPPHSRPP  PNFHQHYPPQ+GHNMNYQP GI PQHVSQPMFHSGTKLPPGLGNSFP GQSGLP+Q PPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPPP+PSVP GQMGP N PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

XP_011650532.1 leucine-rich repeat extensin-like protein 5 [Cucumis sativus]

2.2e-181

86.97

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+QPSA QHSQPST   QQSN++PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTSA PLA  RKQYQNQ +MPISSTTLPT NIQP+  PLIPLQTPQH KGF++PQANP+SVPQPSQ+PSVSPILPSAAQPPLLHQP ISTASM
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV
        QLQ P+QTA+I HLP QA LPPHSRPP  PNFHQHYPPQ+GHNMNYQP GI PQHVSQPMFHSGTKLPPGLGNSFP GQSGLP+Q PPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPPP+PSVP GQMGP N PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

XP_022137042.1 RNA-binding protein 33 isoform X1 [Momordica charantia]

7.2e-185

88.19

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPS+QPS   HSQPST+T  QSNI+PTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
        GQISLQEQT+A PLA PRKQYQNQ +MPISSTTLPTVN+QPQSAPLIPLQTPQH KGFEM QANP+SVPQPSQVPSV P+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV
        QLQ P+QTA+IPHLPLQAPLPP SR P  PNFHQHYP Q+GHNMNYQPAGI PQHVSQPMFHSGTKLPPG+GNSFPP GQS +P+QPPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPP  PSVPGQMGPGN PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQVFQLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

XP_022137043.1 RNA-binding protein 33 isoform X2 [Momordica charantia]

3.6e-184

87.94

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPS+QPS   HSQPST+T  QSNI+PTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
        GQISLQEQT+A PLA PRKQYQNQ +MPISSTTLPTVN+QPQSAPLIPLQTPQH KGFEM QANP+SVPQPSQVPSV P+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV
        QLQ P+QTA+IPHLPLQAPLPP SR P  PNFHQHYP Q+GHNMNYQPAGI PQHVSQPMFH GTKLPPG+GNSFPP GQS +P+QPPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPP  PSVPGQMGPGN PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQVFQLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

XP_038894222.1 cleavage stimulating factor 64 [Benincasa hispida]

1.3e-181

86.65

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPS+QPSA QHSQPST   QQSNI+PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTSA  LA  RKQYQNQ +MPISSTTLPTVNIQP+S PLIPLQTPQH KGF++PQ+NP+SVPQPSQ+PSVSP+LPS+AQPPLLHQP +STASM
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVG
        QLQ P+QTA+I HLP QAPLPPHSR P  PNFHQHYPPQ+GHNMNYQP GI PQHVSQPMFHSGTKLPPGLGNSF  GQSGLP+QPPPQSMYQ GGSK+G
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVG

Query:  AEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
         EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPPP+PSVPG MGP N PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  AEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQD8 Uncharacterized protein

1.1e-181

86.97

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+QPSA QHSQPST   QQSN++PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTSA PLA  RKQYQNQ +MPISSTTLPT NIQP+  PLIPLQTPQH KGF++PQANP+SVPQPSQ+PSVSPILPSAAQPPLLHQP ISTASM
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV
        QLQ P+QTA+I HLP QA LPPHSRPP  PNFHQHYPPQ+GHNMNYQP GI PQHVSQPMFHSGTKLPPGLGNSFP GQSGLP+Q PPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPPP+PSVP GQMGP N PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

A0A1S3C700 extensin

1.9e-183

87.22

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+PS+QPSA QHSQPST   QQSN++PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTSA PLA PRKQYQNQ +MPISSTTLPT NIQP+  PLIPLQTPQH KGF++PQANP+SVPQPSQ+PSVSPILPSAAQPPLLHQP ISTASM
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV
        QLQ P+QTA++ HLP QAPLPPHSRPP  PNFHQHYPPQ+GHNMNYQP GI PQHVSQPMFHSGTKLPPGLGNSFP GQSGLP+Q PPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQ-PPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPPP+PSVP GQMGP N PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVP-GQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

A0A6J1C742 RNA-binding protein 33 isoform X1

3.5e-185

88.19

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPS+QPS   HSQPST+T  QSNI+PTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
        GQISLQEQT+A PLA PRKQYQNQ +MPISSTTLPTVN+QPQSAPLIPLQTPQH KGFEM QANP+SVPQPSQVPSV P+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV
        QLQ P+QTA+IPHLPLQAPLPP SR P  PNFHQHYP Q+GHNMNYQPAGI PQHVSQPMFHSGTKLPPG+GNSFPP GQS +P+QPPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPP  PSVPGQMGPGN PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQVFQLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

A0A6J1C968 RNA-binding protein 33 isoform X2

1.7e-184

87.94

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPS+QPS   HSQPST+T  QSNI+PTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
        GQISLQEQT+A PLA PRKQYQNQ +MPISSTTLPTVN+QPQSAPLIPLQTPQH KGFEM QANP+SVPQPSQVPSV P+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV
        QLQ P+QTA+IPHLPLQAPLPP SR P  PNFHQHYP Q+GHNMNYQPAGI PQHVSQPMFH GTKLPPG+GNSFPP GQS +P+QPPPQSMYQ GGSK+
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPP-GQSGLPNQPPPQSMYQGGGSKV

Query:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
        G EFMNQVG SKPADRGPWMPGPPENPTLPQQLSGPP  PSVPGQMGPGN PRPAPPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQVFQLQK+LRQ
Subjt:  GAEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

A0A6J1E818 proline-rich protein 36-like

4.4e-180

85.89

Show/hide

Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA
        MAGKQV G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSV PSA QHSQP T+T QQSNI+PTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPA

Query:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM
         QISLQEQTS  PLA PRKQYQNQ +MP+SSTTLPT NIQP+SAPLIPLQTPQH KGF+MPQANP S PQPSQ+P+V PILPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASM

Query:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVG
        QLQ P+QTA+IPHLP  APLP HSR P  PNFHQHYPPQIGHNMNYQP GI PQHVSQP+FHSGTKLPPG+GNSFPPGQS LP+QP PQSMYQ GGSK+G
Subjt:  QLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVG

Query:  AEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
         EFMNQVG SKPADRGPWMPGPPENPT PQQLSGPPP+PSV GQMGPGN PR APPLSQ+ME+MLLQQVMSLTPEQINLLPPEQRNQV QLQK+LRQ
Subjt:  AEFMNQVGPSKPADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

SwissProt top hits

e value

%identity

Alignment

Q9M9G6 Cleavage stimulating factor 64

1.5e-07

27.79

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Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPAGQISLQEQTSAQ
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P   Q P++   AP H   S+    Q + +    P        Q S Q
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPAGQISLQEQTSAQ

Query:  PLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASMQLQPPMQTAKIP
           AP  QY  QQ+           + QP S      Q PQ              V QP          PS+  P                PP    K+ 
Subjt:  PLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASMQLQPPMQTAKIP

Query:  HLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVGAEFMNQVGPSKP
        + P Q                Q   P    N+ Y      P +  QP                    S +P+Q  P S+ Q GG  V   F  ++    P
Subjt:  HLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVGAEFMNQVGPSKP

Query:  ADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
              M  P +   +  + +   P   V   M P     P   +S D++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G71800.1 cleavage stimulating factor 64

1.1e-08

27.79

Show/hide

Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPAGQISLQEQTSAQ
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P   Q P++   AP H   S+    Q + +    P        Q S Q
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPAGQISLQEQTSAQ

Query:  PLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASMQLQPPMQTAKIP
           AP  QY  QQ+           + QP S      Q PQ              V QP          PS+  P                PP    K+ 
Subjt:  PLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASMQLQPPMQTAKIP

Query:  HLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVGAEFMNQVGPSKP
        + P Q                Q   P    N+ Y      P +  QP                    S +P+Q  P S+ Q GG  V   F  ++    P
Subjt:  HLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVGAEFMNQVGPSKP

Query:  ADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ
              M  P +   +  + +   P   V   M P     P   +S D++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

AT1G73840.1 hydroxyproline-rich glycoprotein family protein

1.0e-64

46.93

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Query:  MAGKQVAG-AGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI-PSVQPSAPQHSQPS-TNTAQQSNIKPTQ
        MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQIMLGMV+PPQ+ P V+P A Q  Q S  +   + N++   
Subjt:  MAGKQVAG-AGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI-PSVQPSAPQHSQPS-TNTAQQSNIKPTQ

Query:  TP-AGQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPIL---PSAAQPPLLHQP
        +   G  S+ E  +     AP +++   Q MP+     P  ++   SA   P  +    +G   P    MS PQ SQV +  P     P++ QPP  H  
Subjt:  TP-AGQISLQEQTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPIL---PSAAQPPLLHQP

Query:  SISTASMQLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQ
          ++++   Q PM +   PH+  Q      SRP H    HQ+   Q G N  +Q  G P QH+SQPM+HSG + P   G  FP GQ  LP+QP     YQ
Subjt:  SISTASMQLQPPMQTAKIPHLPLQAPLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQ

Query:  GGGSKVGAEFMNQVGPSKPADRGP-WMPGPPENPTLPQQLSGPPPMPSVPGQMGPGN--PPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQ
        GGG   G    NQ+      DRGP WM G  E+  +   L G  P+P  P Q+GPG   PPRPA P+S +ME+ LLQQVMSLTPEQINLLPPEQRNQV Q
Subjt:  GGGSKVGAEFMNQVGPSKPADRGP-WMPGPPENPTLPQQLSGPPPMPSVPGQMGPGN--PPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQ

Query:  LQKMLRQ
        LQ++LRQ
Subjt:  LQKMLRQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAACATGGCCGGAAAGCAAGTCGCCGGCGCCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAACCAGCTATATGATATCATGTCTCAAATGAAGACTCTGAT
CGAACAGAATCAACAGCAGGCCAAACAAATCCTAATCCAAAACCCGCTTTTGACCAAAGCTCTTTTCCAGGCGCAGATTATGCTTGGGATGGTACGTCCTCCTCAGATTC
CAAGCGTCCAGCCTTCAGCCCCACAGCATTCTCAGCCATCAACAAACACAGCTCAACAATCAAATATTAAGCCTACTCAAACACCAGCAGGTCAGATAAGTTTGCAAGAG
CAGACAAGTGCACAACCGTTGGCCGCTCCTAGAAAACAATATCAGAACCAACAAGCAATGCCTATCTCATCAACTACTCTTCCTACCGTTAACATTCAGCCTCAGTCAGC
ACCTCTGATTCCCCTGCAGACCCCGCAACATTCCAAGGGTTTTGAGATGCCCCAAGCAAATCCCATGTCTGTCCCACAGCCCTCTCAAGTTCCAAGTGTATCTCCAATAC
TTCCATCTGCTGCTCAGCCACCTTTACTCCATCAACCCTCGATTTCAACTGCTTCCATGCAGCTGCAGCCACCAATGCAAACAGCTAAAATTCCCCACCTTCCTCTACAG
GCACCATTGCCTCCACATTCCAGACCACCCCATGCTCCAAATTTCCATCAGCACTACCCCCCTCAAATCGGGCACAATATGAATTATCAACCTGCTGGCATTCCTCCGCA
GCATGTTTCACAACCCATGTTTCATTCAGGTACCAAACTCCCTCCTGGTTTAGGAAATTCATTTCCCCCTGGACAGTCGGGACTTCCTAATCAGCCACCTCCTCAATCAA
TGTATCAGGGTGGAGGTTCTAAAGTAGGTGCAGAATTCATGAATCAAGTGGGACCTTCAAAGCCTGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCGACA
CTTCCACAGCAACTCTCAGGACCACCACCAATGCCATCAGTCCCTGGTCAGATGGGCCCCGGCAATCCGCCTCGTCCTGCACCACCGTTGAGTCAGGACATGGAGCAGAT
GCTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTGTTGCCTCCAGAGCAAAGGAATCAAGTGTTTCAGCTACAGAAGATGCTGCGCCAATGA

mRNA sequence

Show/hide mRNA sequence

TGATTTTCCAAACGAGCAAACGCTACGCTGCCCGTCAGAGGACTGTTGCAGCGTTGTTGTCCAAAAATCGAGAACAAATAATCCCAGTCTCCGTTGGCGTTTGTATGTCG
AACATGGCCGGAAAGCAAGTCGCCGGCGCCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAACCAGCTATATGATATCATGTCTCAAATGAAGACTCTGATCGAACA
GAATCAACAGCAGGCCAAACAAATCCTAATCCAAAACCCGCTTTTGACCAAAGCTCTTTTCCAGGCGCAGATTATGCTTGGGATGGTACGTCCTCCTCAGATTCCAAGCG
TCCAGCCTTCAGCCCCACAGCATTCTCAGCCATCAACAAACACAGCTCAACAATCAAATATTAAGCCTACTCAAACACCAGCAGGTCAGATAAGTTTGCAAGAGCAGACA
AGTGCACAACCGTTGGCCGCTCCTAGAAAACAATATCAGAACCAACAAGCAATGCCTATCTCATCAACTACTCTTCCTACCGTTAACATTCAGCCTCAGTCAGCACCTCT
GATTCCCCTGCAGACCCCGCAACATTCCAAGGGTTTTGAGATGCCCCAAGCAAATCCCATGTCTGTCCCACAGCCCTCTCAAGTTCCAAGTGTATCTCCAATACTTCCAT
CTGCTGCTCAGCCACCTTTACTCCATCAACCCTCGATTTCAACTGCTTCCATGCAGCTGCAGCCACCAATGCAAACAGCTAAAATTCCCCACCTTCCTCTACAGGCACCA
TTGCCTCCACATTCCAGACCACCCCATGCTCCAAATTTCCATCAGCACTACCCCCCTCAAATCGGGCACAATATGAATTATCAACCTGCTGGCATTCCTCCGCAGCATGT
TTCACAACCCATGTTTCATTCAGGTACCAAACTCCCTCCTGGTTTAGGAAATTCATTTCCCCCTGGACAGTCGGGACTTCCTAATCAGCCACCTCCTCAATCAATGTATC
AGGGTGGAGGTTCTAAAGTAGGTGCAGAATTCATGAATCAAGTGGGACCTTCAAAGCCTGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCGACACTTCCA
CAGCAACTCTCAGGACCACCACCAATGCCATCAGTCCCTGGTCAGATGGGCCCCGGCAATCCGCCTCGTCCTGCACCACCGTTGAGTCAGGACATGGAGCAGATGCTACT
TCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTGTTGCCTCCAGAGCAAAGGAATCAAGTGTTTCAGCTACAGAAGATGCTGCGCCAATGAGCAAGGGGAGGCA
GGCTTGGCTTATCTTCATTTTATCCTTCCCTTCCCCTCTCCCTTTGTCAACTCCTTGCATGATTGGATATGCTCAAAATGGTTTTTAGGCTGTTAGGGGAACTTTTTTTA
CTATTGTCTTATTACAACTTCGGTATTGACATCCAGATTGATATAATACAATTCTAATATTGGCTTATTTTGCCAATTCGTCTGAGCA

Protein sequence

Show/hide protein sequence

MSNMAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVQPSAPQHSQPSTNTAQQSNIKPTQTPAGQISLQE
QTSAQPLAAPRKQYQNQQAMPISSTTLPTVNIQPQSAPLIPLQTPQHSKGFEMPQANPMSVPQPSQVPSVSPILPSAAQPPLLHQPSISTASMQLQPPMQTAKIPHLPLQ
APLPPHSRPPHAPNFHQHYPPQIGHNMNYQPAGIPPQHVSQPMFHSGTKLPPGLGNSFPPGQSGLPNQPPPQSMYQGGGSKVGAEFMNQVGPSKPADRGPWMPGPPENPT
LPQQLSGPPPMPSVPGQMGPGNPPRPAPPLSQDMEQMLLQQVMSLTPEQINLLPPEQRNQVFQLQKMLRQ

Sed0008793 (gene) of Chayote v1 genome