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Sed0008843 (gene) of Chayote v1 genome

Gene IDSed0008843
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG10:27802259..27802871
RNA-Seq ExpressionSed0008843
SyntenySed0008843
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.6e-2368.83Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        +LSRE+IKEIFREHDIDGDG+LS+SE+VKAF +FG+ LPFYKA+YG++HAD +GDG I+E+EL+ LV+YAE+ Q++R
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]1.0e-2265.82Show/hide
Query:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        R +LSRE+IKEIFREHDIDGDG+LS++E+VKAF  FG+ LPFYKA+YG++HAD +GDG I+E+EL+ LV+YA++ Q++R
Subjt:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]1.0e-2265.82Show/hide
Query:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        R +LSRE+IKEIFREHDIDGDG+LS++E+VKAF  FG+ LPFYKA+YG++HAD +GDG I+E+EL+ LV+YA++ Q++R
Subjt:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

XP_022951879.1 calmodulin-like [Cucurbita moschata]3.9e-2265Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF
        KLSR +IKEIF EHDIDGDG LS+SEL KAF++FG+ +P YKA+YGL++ADADGDG+I E+ELE LV+YAE++  ++  F
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF

XP_023002888.1 calmodulin-like [Cucurbita maxima]3.9e-2265Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF
        KLSR +IKEIF EHDIDGDG LS+SEL KAF++FG+ +P YKA+YGL++ADADGDG+I E+ELE LV+YAE++  ++  F
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein1.4e-2065.33Show/hide
Query:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        SREE+KEIFREHDIDGDG LSISEL+KA  + G  +PFYKA+YG+++ D +GDG+I EDEL+ L++YAE+ Q RR
Subjt:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

A0A0A0LRC1 Uncharacterized protein5.0e-2365.82Show/hide
Query:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        R +LSRE+IKEIFREHDIDGDG+LS++E+VKAF  FG+ LPFYKA+YG++HAD +GDG I+E+EL+ LV+YA++ Q++R
Subjt:  RPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

A0A5A7UYC0 Putative calcium-binding protein CML107.7e-2468.83Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR
        +LSRE+IKEIFREHDIDGDG+LS+SE+VKAF +FG+ LPFYKA+YG++HAD +GDG I+E+EL+ LV+YAE+ Q++R
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRR

A0A6J1GK16 calmodulin-like1.9e-2265Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF
        KLSR +IKEIF EHDIDGDG LS+SEL KAF++FG+ +P YKA+YGL++ADADGDG+I E+ELE LV+YAE++  ++  F
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF

A0A6J1KUW2 calmodulin-like1.9e-2265Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF
        KLSR +IKEIF EHDIDGDG LS+SEL KAF++FG+ +P YKA+YGL++ADADGDG+I E+ELE LV+YAE++  ++  F
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 52.9e-0433.33Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL
        ++   E+K +F+  D +GDG+++  EL  +    G Y+P       +   DA+GDG +D DE E+L
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL

Q8L3R2 Probable calcium-binding protein CML411.0e-0433.85Show/hide
Query:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLV
        S+EE++++F   D DGDGK+S  EL   F   G Y+    A   ++  D D DG +  ++   L+
Subjt:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLV

Q8RYJ9 Putative calcium-binding protein CML231.0e-0436.62Show/hide
Query:  LSREEIKEIFREHDIDGDGKLSISEL-VKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAE
        ++ +E + +F   D DGDGK+S +EL +   A  G  +P  +    ++ AD DGDG++DE+E   LV   E
Subjt:  LSREEIKEIFREHDIDGDGKLSISEL-VKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAE

Q8RZB5 Probable calcium-binding protein CML105.0e-0440.32Show/hide
Query:  EEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL
        EE++ +FR+ D +GDG++S SEL   F   G      +    ++ ADADGDG I  DE   L
Subjt:  EEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL

Q9SRE6 Calcium-binding protein CML382.2e-0430.99Show/hide
Query:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR
        E++ +F   D + DG++S  EL K+F   G  L   +A   +  +D DGDGM+D +E   L+   ++ + +
Subjt:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.5e-0534.21Show/hide
Query:  EEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF
        EE+K++F + D +GDGK+S+ EL   F   GT     +    L   D D DG I+ DE   L   +  +   R  F
Subjt:  EEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPF

AT1G76650.1 calmodulin-like 381.6e-0530.99Show/hide
Query:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR
        E++ +F   D + DG++S  EL K+F   G  L   +A   +  +D DGDGM+D +E   L+   ++ + +
Subjt:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR

AT1G76650.3 calmodulin-like 381.6e-0530.99Show/hide
Query:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR
        E++ +F   D + DG++S  EL K+F   G  L   +A   +  +D DGDGM+D +E   L+   ++ + +
Subjt:  EIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNR

AT2G43290.1 Calcium-binding EF-hand family protein2.1e-0533.33Show/hide
Query:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL
        ++   E+K +F+  D +GDG+++  EL  +    G Y+P       +   DA+GDG +D DE E+L
Subjt:  KLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENL

AT3G50770.1 calmodulin-like 417.1e-0633.85Show/hide
Query:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLV
        S+EE++++F   D DGDGK+S  EL   F   G Y+    A   ++  D D DG +  ++   L+
Subjt:  SREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTGAAGGCAGGCCAAAACTCTCCAGGGAAGAGATCAAGGAGATCTTCCGAGAGCACGACATCGACGGTGATGGTAAATTGTCCATCAGCGAGCTAGTGAAGGC
CTTCGCATGGTTCGGAACCTATCTTCCTTTTTACAAAGCTTACTATGGATTGTCTCATGCTGATGCCGATGGCGATGGCATGATCGACGAGGACGAGCTGGAAAATCTTG
TCAACTATGCCGAGCAGTCTCAGAATAGGAGACTGCCCTTTGTATATTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAATAAAAATAAATAAACACGAACGTTTTGAAAAGCACAAAAAAAAAAACAGATTATTTCTGGAAAATGTCTTTTGAAGGCAGGCCAAAACTCTCCAGGGAAGAGAT
CAAGGAGATCTTCCGAGAGCACGACATCGACGGTGATGGTAAATTGTCCATCAGCGAGCTAGTGAAGGCCTTCGCATGGTTCGGAACCTATCTTCCTTTTTACAAAGCTT
ACTATGGATTGTCTCATGCTGATGCCGATGGCGATGGCATGATCGACGAGGACGAGCTGGAAAATCTTGTCAACTATGCCGAGCAGTCTCAGAATAGGAGACTGCCCTTT
GTATATTAAACTTCCCCTGCTTGCTAACGGTGTTATTCGTTTCATGCACCAGATTACTTTTTAAGTTTGAAGTTTTAATGTTAAATAAAGAAAACGGAGGGCTATCTAGC
TTATCTAGTCGGCCTTGCTTTGAATTATATATGTTGTGTTTTTATTTCGCAAGCGTTGTCAAGATCTTGGTGCCGTTTATGAAGTTAATAAGATCTTGACATAAAATACT
AACGTATTTATGTGATGTAGCTCACTTTTCTTATGAAGATCGTAAAGTCGCTTTATTTTTTCA
Protein sequenceShow/hide protein sequence
MSFEGRPKLSREEIKEIFREHDIDGDGKLSISELVKAFAWFGTYLPFYKAYYGLSHADADGDGMIDEDELENLVNYAEQSQNRRLPFVY