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Sed0008846 (gene) of Chayote v1 genome

Gene IDSed0008846
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive protein
Genome locationLG04:47039122..47039640
RNA-Seq ExpressionSed0008846
SyntenySed0008846
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.7e-3073.81Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        M +RHLLK  +GV AVPKG+CAVYVG+S+KK+F+IPI YLN+PCFQ LLCQTEEEFGY+HPMGGLTIHCRD+IF   I H+N L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]9.5e-2978.21Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLI
        MGIR LLK  QGV  +PKG+CAVYVGE++KK+FVIPIT+LNQ CFQ LL QTEE+FGYHHPMGGLTIHCRD+IFT+LI
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLI

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.3e-3076.19Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        M + HLLK  QGV ++PKG+CAVYVGES+KK+F+IPI+YLNQPCFQ LL QTEEEFGYHHPMGGLTIHC+D IFTNLI  LN L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]9.8e-2676.39Show/hide
Query:  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN
        +GV  VPKG+CAVYVGE +KK+FVIP+TYLNQPCFQ LL Q EEEFGY+HPMGGLTI CR++IFTNLI  LN
Subjt:  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]5.4e-3279.76Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        MG+R LLK  QGV AVPKG+CAVYVGES+KK+FVIPI+YLNQPCFQ LLCQ EEEFGY+HPMGGLTIHCRD+IFT+LI  LN L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein2.6e-3278.57Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        M ++HLLK  QGV AVPKG+CAVYVGES+KK+FVIPITYLN+PCFQ LLCQTEEEFGY+HPMGGLTIHCRD+IFT+LI ++N L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

A0A0A0K5U4 Uncharacterized protein6.4e-3176.19Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        M + HLLK  QGV ++PKG+CAVYVGES+KK+F+IPI+YLNQPCFQ LL QTEEEFGYHHPMGGLTIHC+D IFTNLI  LN L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

A0A5A7U363 Auxin-induced protein 15A-like8.3e-3173.81Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        M +RHLLK  +GV AVPKG+CAVYVG+S+KK+F+IPI YLN+PCFQ LLCQTEEEFGY+HPMGGLTIHCRD+IF   I H+N L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

A0A5D3CL76 Auxin-induced protein 15A-like4.7e-2676.39Show/hide
Query:  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN
        +GV  VPKG+CAVYVGE +KK+FVIP+TYLNQPCFQ LL Q EEEFGY+HPMGGLTI CR++IFTNLI  LN
Subjt:  QGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN

A0A6J1C4W2 auxin-responsive protein SAUR24-like2.6e-3279.76Show/hide
Query:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL
        MG+R LLK  QGV AVPKG+CAVYVGES+KK+FVIPI+YLNQPCFQ LLCQ EEEFGY+HPMGGLTIHCRD+IFT+LI  LN L
Subjt:  MGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.2e-2061.43Show/hide
Query:  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN
        V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L+
Subjt:  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN

Q9FJF7 Auxin-responsive protein SAUR221.3e-2052.94Show/hide
Query:  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        R  +G + +L +    V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++E+EFG+ HPMGGLTI C ++ F N+   L
Subjt:  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL

Q9FJG0 Auxin-responsive protein SAUR204.4e-2155.42Show/hide
Query:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNL
        F R  +G + +L +      A PKGF AVYVGES+KK++++PI+YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+
Subjt:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNL

Q9FJG1 Auxin-responsive protein SAUR198.3e-2051.72Show/hide
Query:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        F R  +G + +L +      A PKGF AVYVGES+KK++++P++YL+QP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L
Subjt:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL

Q9FK62 Auxin-responsive protein SAUR243.4e-2154.02Show/hide
Query:  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        F R  +G + +L    G   A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L
Subjt:  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL

Arabidopsis top hitse value%identityAlignment
AT5G18010.1 SAUR-like auxin-responsive protein family5.9e-2151.72Show/hide
Query:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        F R  +G + +L +      A PKGF AVYVGES+KK++++P++YL+QP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L
Subjt:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL

AT5G18020.1 SAUR-like auxin-responsive protein family3.1e-2255.42Show/hide
Query:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNL
        F R  +G + +L +      A PKGF AVYVGES+KK++++PI+YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+
Subjt:  FYRKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNL

AT5G18050.1 SAUR-like auxin-responsive protein family9.1e-2252.94Show/hide
Query:  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        R  +G + +L +    V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++E+EFG+ HPMGGLTI C ++ F N+   L
Subjt:  RKSMGIRHLL-KIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL

AT5G18060.1 SAUR-like auxin-responsive protein family1.6e-2161.43Show/hide
Query:  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN
        V A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L+
Subjt:  VKAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLN

AT5G18080.1 SAUR-like auxin-responsive protein family2.4e-2254.02Show/hide
Query:  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL
        F R  +G + +L    G   A PKGF AVYVGES+KK++++P++YLNQP FQALL ++EEEFG+ HPMGGLTI C ++ F N+   L
Subjt:  FYRKSMGIRHLLKIIQGV-KAVPKGFCAVYVGESEKKQFVIPITYLNQPCFQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTCGTCTTGCACGCAGTCCCATCAAAGCTTCTAAGAATGCCTCTTTATCAACTATATATAGATTTACACATTTGATATGGTTCAGAAGCAACCACAAGCCTTT
ACTTCCCCACTCAAAAGAAACTTTCTTCTCTCTAAAACGCATTTTGCGATCTTCGTGTGCTCTAAGTGTACGATTTTATCGGAAAAGCATGGGAATTCGCCATCTTCTTA
AAATAATCCAAGGAGTTAAAGCAGTTCCCAAGGGATTCTGCGCAGTCTATGTCGGAGAAAGCGAAAAGAAACAGTTCGTGATCCCGATAACTTATTTGAATCAACCATGT
TTCCAAGCGTTGTTGTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAGAGATGAAATTTTCACCAATCTCATCTTTCATCT
GAACGGTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGTCGTCTTGCACGCAGTCCCATCAAAGCTTCTAAGAATGCCTCTTTATCAACTATATATAGATTTACACATTTGATATGGTTCAGAAGCAACCACAAGCCTTT
ACTTCCCCACTCAAAAGAAACTTTCTTCTCTCTAAAACGCATTTTGCGATCTTCGTGTGCTCTAAGTGTACGATTTTATCGGAAAAGCATGGGAATTCGCCATCTTCTTA
AAATAATCCAAGGAGTTAAAGCAGTTCCCAAGGGATTCTGCGCAGTCTATGTCGGAGAAAGCGAAAAGAAACAGTTCGTGATCCCGATAACTTATTTGAATCAACCATGT
TTCCAAGCGTTGTTGTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAGAGATGAAATTTTCACCAATCTCATCTTTCATCT
GAACGGTCTATGAGAGATGCAATGAATTCTATAGAATACAACCAATTTGTAGAATAGAGTTATTAGATTTAACCAAAAC
Protein sequenceShow/hide protein sequence
MSRRLARSPIKASKNASLSTIYRFTHLIWFRSNHKPLLPHSKETFFSLKRILRSSCALSVRFYRKSMGIRHLLKIIQGVKAVPKGFCAVYVGESEKKQFVIPITYLNQPC
FQALLCQTEEEFGYHHPMGGLTIHCRDEIFTNLIFHLNGL