; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008856 (gene) of Chayote v1 genome

Gene IDSed0008856
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:19412663..19415299
RNA-Seq ExpressionSed0008856
SyntenySed0008856
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067747.1 hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa]1.4e-6077.64Show/hide
Query:  GSMGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPG
        GSMGKGRVRG  LGP+STIVFKSTPR+FTE EIHDE         N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ T A+TNGD PYC+YKNPG
Subjt:  GSMGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPG

Query:  RVCSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        RVCSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  RVCSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

KAG6583423.1 hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5180.77Show/hide
Query:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV
        MGKGRVRG  LGP+ TIVFKSTPR+FTEIEIH+EAN       NMEDY++VDARLS+LELKMANMLSILEQNGFMQ+N+ TAAHTNGDSPYC+YKNPGRV
Subjt:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV

Query:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQN
        C MK+QPTSTQVFRS+S RNIRNEA MDQN
Subjt:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQN

KAG7019185.1 hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5278.26Show/hide
Query:  LGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRVCSMKIQPTST
        LGP+ TIVFKSTPR+FTEIEIH+EAN       NMEDY++VDARLS+LELKMANMLSILEQNGFMQ+N+ TAAHTNGDSPYC+YKNPGRVC MK+QPTST
Subjt:  LGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRVCSMKIQPTST

Query:  QVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSI
        QVFRS+S RNIRNEA MDQNVDTRL ILE QM K + +
Subjt:  QVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSI

KGN65730.1 hypothetical protein Csa_019939 [Cucumis sativus]3.3e-6278.62Show/hide
Query:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV
        MGKGRVRG  LGP+STIVFKSTPR+FTE EIHDEA        N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ TA HTNGD PYC+YKNPGRV
Subjt:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV

Query:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        CSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

TYJ97397.1 hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa]1.5e-5977.36Show/hide
Query:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV
        MGKGRVRG  LGP+STIVFKSTPR+FTE EIHDE         N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ T A+TNGD PYC+YKNPGRV
Subjt:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV

Query:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        CSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

TrEMBL top hitse value%identityAlignment
A0A0A0LUW6 Uncharacterized protein1.6e-6278.62Show/hide
Query:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV
        MGKGRVRG  LGP+STIVFKSTPR+FTE EIHDEA        N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ TA HTNGD PYC+YKNPGRV
Subjt:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV

Query:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        CSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

A0A5A7VKN2 Uncharacterized protein6.6e-6177.64Show/hide
Query:  GSMGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPG
        GSMGKGRVRG  LGP+STIVFKSTPR+FTE EIHDE         N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ T A+TNGD PYC+YKNPG
Subjt:  GSMGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPG

Query:  RVCSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        RVCSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  RVCSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

A0A5D3BE38 Uncharacterized protein7.3e-6077.36Show/hide
Query:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV
        MGKGRVRG  LGP+STIVFKSTPR+FTE EIHDE         N+EDYQ+VDARLS+LELKMANM+SILEQNGFMQ+N+ T A+TNGD PYC+YKNPGRV
Subjt:  MGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRV

Query:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI
        CSM++QP STQVFRS+S RNIRNEA MDQNVDTRL ILE QM KVVSILRRNG+MQG+I
Subjt:  CSMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTTCCTTTTCTGGACGGTTCTATGGGTAAAGGACGTGTTCGTGGCACAAGTTTAGGACCCTCCTCCACCATAGTGTTCAAGTCTACACCACGTCGATTTACCGA
GATCGAGATTCATGACGAGGCCAATATTGAGATTGATGATGAGCCAAATATGGAAGATTACCAAGATGTAGATGCTAGACTTTCGCTATTAGAGTTGAAAATGGCCAATA
TGCTTTCGATTTTGGAACAAAATGGTTTCATGCAAGCCAATAGTGCAACTGCTGCACATACAAATGGTGATTCGCCATACTGCGTATACAAGAATCCTGGACGTGTTTGT
AGCATGAAAATACAACCTACCTCGACTCAAGTGTTCAGATCTGTCTCGCAACGTAATATCCGTAACGAGGCTCATATGGATCAAAACGTAGATACTAGACTTTTGATATT
AGAGGTGCAAATGAACAAGGTAGTTTCGATTTTACGACGAAATGGTGTCATGCAAGGCGACATCTGA
mRNA sequenceShow/hide mRNA sequence
CGGTCACAGATATTTGAGGAGCAATTTTGTGGAATATGGTGAAATATTCAAAAAAATAAAATAAATAAAGAGGTTTTTGATTGTCGTCCCGCTGGCCAAACCCTCAGTGC
CTCGAACGCTCCGTAACTTTCTCTCTCAAATCCTGTCTGCAACTTCCGCCATTTTGATTCTCAGGTTTCTTCTCTCTTTTCTCTTCTTCTCTTTTGTTCTTCCATTCCCT
CTTGCTGTTCTCAACTCCATTGCCCAGAATCTTCAATTCCCCCCTGCATCCTCCATTTCTTTTCCAGTTTTCGCATGTTACTTCCTTTTCTGGACGGTTCTATGGGTAAA
GGACGTGTTCGTGGCACAAGTTTAGGACCCTCCTCCACCATAGTGTTCAAGTCTACACCACGTCGATTTACCGAGATCGAGATTCATGACGAGGCCAATATTGAGATTGA
TGATGAGCCAAATATGGAAGATTACCAAGATGTAGATGCTAGACTTTCGCTATTAGAGTTGAAAATGGCCAATATGCTTTCGATTTTGGAACAAAATGGTTTCATGCAAG
CCAATAGTGCAACTGCTGCACATACAAATGGTGATTCGCCATACTGCGTATACAAGAATCCTGGACGTGTTTGTAGCATGAAAATACAACCTACCTCGACTCAAGTGTTC
AGATCTGTCTCGCAACGTAATATCCGTAACGAGGCTCATATGGATCAAAACGTAGATACTAGACTTTTGATATTAGAGGTGCAAATGAACAAGGTAGTTTCGATTTTACG
ACGAAATGGTGTCATGCAAGGCGACATCTGAGAAGAACCACACAAAAGTCTCAAGACAGGAACCTGGAGTTAACACACTGCTGTTGGATTAAGTTGGTGAAGTCTACTCA
ACACATCTTTTCTAATATTTTTGAAGCTGTTATGGTAAAACAATTTGATCTAGTAATCTCTCTAGGGATAAATATTGTTGTTTTGTTTAGATTTTTGGGAATGATATGAA
GAATGTGTTAGATTATTCCTCCTACTTTCAACATTTTTTGTGTTGAAATCTTATAGATGGTAGTGCAGATATATGTACTTGTCACATAAAAGTACAGATATATTAAGATA
TGTGTTAACATAAATATATTTTCCAA
Protein sequenceShow/hide protein sequence
MLLPFLDGSMGKGRVRGTSLGPSSTIVFKSTPRRFTEIEIHDEANIEIDDEPNMEDYQDVDARLSLLELKMANMLSILEQNGFMQANSATAAHTNGDSPYCVYKNPGRVC
SMKIQPTSTQVFRSVSQRNIRNEAHMDQNVDTRLLILEVQMNKVVSILRRNGVMQGDI