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Sed0008862 (gene) of Chayote v1 genome

Gene IDSed0008862
OrganismSechium edule (Chayote v1)
DescriptionMADS-box protein CMB1
Genome locationLG08:37528146..37528646
RNA-Seq ExpressionSed0008862
SyntenySed0008862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ03822.1 hypothetical protein Acr_16g0004460 [Actinidia rufa]6.1e-1063.08Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPN
        MVS+VE+   ++QQQ Q  Q     KQ++CNK K  KFKRSSS+++EDGASSAILLLACIAF PN
Subjt:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPN

KAG6584135.1 hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2077.03Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQ---AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNFSPVAG
        MVS+VE+T   K QQVQPPQ   AAATAKQI+CNKAKYPKFKRS S+V+EDGASSA+LLLACIAF P+FSPV G
Subjt:  MVSRVEDTHGRKQQQVQPPQ---AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNFSPVAG

KAG7012298.1 hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-1775.34Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQAA--ATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNFSPVAG
        MVS+VE+   RKQQQVQ P AA  A AKQI+ NKAKYPKFKRSSSDV +DGASSAILLLACIAF+P  SPV+G
Subjt:  MVSRVEDTHGRKQQQVQPPQAA--ATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNFSPVAG

KGN64384.1 hypothetical protein Csa_013100 [Cucumis sativus]7.4e-1675.36Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQ-------AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAF
        MVS+VE+T  RK QQV PPQ       AAATAKQI+CNKAKYPKFKRSSS+V+EDGASSA+LLLACIAF
Subjt:  MVSRVEDTHGRKQQQVQPPQ-------AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAF

XP_038682933.1 uncharacterized protein LOC119983336 [Tripterygium wilfordii]2.7e-1063.64Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF
        MVSRVE+   +KQQQ Q  Q     KQI+CNK K  KFKRS+S+++EDGASSAILLLACIA TP++
Subjt:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF

TrEMBL top hitse value%identityAlignment
A0A061FZA4 Uncharacterized protein2.5e-0956.16Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQAA-------ATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF
        MVS+VE+   R+QQ  Q               KQI+CNK K PKFKRSSS+++EDGASSAILLLACIA TP++
Subjt:  MVSRVEDTHGRKQQQVQPPQAA-------ATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF

A0A0A0LTS0 Uncharacterized protein3.6e-1675.36Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQ-------AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAF
        MVS+VE+T  RK QQV PPQ       AAATAKQI+CNKAKYPKFKRSSS+V+EDGASSA+LLLACIAF
Subjt:  MVSRVEDTHGRKQQQVQPPQ-------AAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAF

A0A2N9FIV7 Uncharacterized protein4.2e-0956.72Show/hide
Query:  MVSRVEDT-HGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF
        MVS+VE+   G++QQ  QP       KQ++CNK K  KFKRS+S+++EDGASSAILLLACI  TP++
Subjt:  MVSRVEDT-HGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF

A0A7J0FYN8 Uncharacterized protein2.9e-1063.08Show/hide
Query:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPN
        MVS+VE+   ++QQQ Q  Q     KQ++CNK K  KFKRSSS+++EDGASSAILLLACIAF PN
Subjt:  MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPN

A0A7N2MNT1 Uncharacterized protein2.5e-0958.21Show/hide
Query:  MVSRVED-THGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF
        MVS+VE+ T G++QQ  QP       KQ++CNK K  KFKRSSS+++EDGASSAILLLACI   P++
Subjt:  MVSRVED-THGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G50335.1 unknown protein1.7e-0548.21Show/hide
Query:  EDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIA
        +D H +K+ Q              CNK K  +FKRS+S++D DGASSAI LLACIA
Subjt:  EDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTAGAGTGGAAGACACACACGGAAGGAAGCAGCAGCAAGTTCAGCCGCCGCAAGCGGCGGCGACGGCGAAGCAAATTAAGTGCAATAAAGCTAAGTATCCGAA
GTTCAAAAGAAGTAGCTCCGATGTCGACGAAGACGGCGCCTCTTCCGCCATTCTTTTGCTTGCTTGCATTGCTTTTACCCCCAATTTTAGCCCCGTCGCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
CAATTACTCATTTCCATCATTTCCTTAAAAATCTTTGTTTAGTTTTTATTTTTTTAAGGGAGCCTTAAAAAAAATGGTGTCTAGAGTGGAAGACACACACGGAAGGAAGC
AGCAGCAAGTTCAGCCGCCGCAAGCGGCGGCGACGGCGAAGCAAATTAAGTGCAATAAAGCTAAGTATCCGAAGTTCAAAAGAAGTAGCTCCGATGTCGACGAAGACGGC
GCCTCTTCCGCCATTCTTTTGCTTGCTTGCATTGCTTTTACCCCCAATTTTAGCCCCGTCGCCGGCTAAATACGGCGGCGGCGCCTGCCGTGGAGGAAAAAATAGTCACT
GTCTCTATAACCACCGGTCGTCGGAGGCAATTTCCGGTTGCTAATTTAATAGAGTACCAATCACCGCCGTAGCCTTTCATTCCGATTCTCTCTAATTTAGGACTATAATT
ATATCGATGATATTTCTTATTTCTATAATTGGTATTTCTTTTCGCTTTATTAATTGTGCAC
Protein sequenceShow/hide protein sequence
MVSRVEDTHGRKQQQVQPPQAAATAKQIKCNKAKYPKFKRSSSDVDEDGASSAILLLACIAFTPNFSPVAG