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Sed0008872 (gene) of Chayote v1 genome

Gene IDSed0008872
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:45765917..45766470
RNA-Seq ExpressionSed0008872
SyntenySed0008872
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587417.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. sororia]6.5e-0762.3Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL   D ERLL V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

XP_008464450.1 PREDICTED: putative calcium-binding protein CML19 [Cucumis melo]1.3e-0763.93Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL A D ERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

XP_022987451.1 putative calcium-binding protein CML19 [Cucurbita maxima]4.9e-0760.66Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N++ L+   LL   AE  VE LDSD DGLL A DFERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

XP_023529455.1 probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]6.5e-0762.3Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL   D ERLL V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

XP_038879778.1 putative calcium-binding protein CML19 [Benincasa hispida]5.8e-0863.93Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L L+   LL   AEA VE LDSD DGLL A DFERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

TrEMBL top hitse value%identityAlignment
A0A1S3CN12 putative calcium-binding protein CML196.3e-0863.93Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL A D ERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

A0A5A7URJ2 Putative calcium-binding protein CML196.3e-0863.93Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL A D ERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

A0A6J1EJM6 putative calcium-binding protein CML193.1e-0762.3Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL   D ERLL V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

A0A6J1HRH8 probable calcium-binding protein CML313.1e-0762.3Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N+L LI   LL   AEA VE LDSD DGLL   D ERLL V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

A0A6J1JE84 putative calcium-binding protein CML192.4e-0760.66Show/hide
Query:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED
        YF EDG  KISPS L+N++ L+   LL   AE  VE LDSD DGLL A DFERLL+V EE+
Subjt:  YFVEDGGNKISPSRLKNQLELIDKGLL--SAEAVVELLDSDDDGLLYANDFERLLKVDEED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCTGGGATGGATCTCCATGTCTGGAACAAGGTTACTTCGTCGAGGATGGCGGCAACAAGATATCACCGTCGAGACTAAAGAATCAGCTCGAATTAATCGACAA
AGGGTTGCTGTCGGCGGAGGCGGTGGTGGAACTGTTGGACTCCGACGACGACGGGTTGCTCTATGCCAACGATTTCGAGCGCCTGCTCAAGGTTGACGAGGAAGATCACT
AG
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCTGGGATGGATCTCCATGTCTGGAACAAGGTTACTTCGTCGAGGATGGCGGCAACAAGATATCACCGTCGAGACTAAAGAATCAGCTCGAATTAATCGACAA
AGGGTTGCTGTCGGCGGAGGCGGTGGTGGAACTGTTGGACTCCGACGACGACGGGTTGCTCTATGCCAACGATTTCGAGCGCCTGCTCAAGGTTGACGAGGAAGATCACT
AG
Protein sequenceShow/hide protein sequence
MTFWDGSPCLEQGYFVEDGGNKISPSRLKNQLELIDKGLLSAEAVVELLDSDDDGLLYANDFERLLKVDEEDH