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Sed0008904 (gene) of Chayote v1 genome

Gene IDSed0008904
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationContig00347:101141..102110
RNA-Seq ExpressionSed0008904
SyntenySed0008904
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA9893494.1 unnamed protein product [Spirodela intermedia]8.4e-2073.61Show/hide
Query:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLRESTFQTAAESMGRQETTWRTETS
        +D+ +  + TLGWHSL  +    QT+KGLRWIPRHPETRKGV SDEMLRE TF+TAAESMGRQETTWRTETS
Subjt:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLRESTFQTAAESMGRQETTWRTETS

KAB1201082.1 hypothetical protein CJ030_MR0G005138 [Morella rubra]7.2e-1966.67Show/hide
Query:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR------------ESTFQTAAESMGRQETTWRTETS
        +D+ +    TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR             STFQTAAESMGRQETTWRTETS
Subjt:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR------------ESTFQTAAESMGRQETTWRTETS

KAD3640919.1 hypothetical protein E3N88_30142 [Mikania micrantha]8.4e-2042.77Show/hide
Query:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP-----------------------------------------------------------
        P EEDQVGPCEQLDALSPFNPLSE+RQKEGKSMDRP    P                                                           
Subjt:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP-----------------------------------------------------------

Query:  -------------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR
                           TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR
Subjt:  -------------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR

KAD6795826.1 hypothetical protein E3N88_06722 [Mikania micrantha]3.2e-1944.74Show/hide
Query:  MDGSWSRRLSWGS----LIWDPWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP--------------------------------------
        MD +W+  +  GS    L     EEDQVGPCEQLDALSPFNPLSE+RQK G+ +  P  S+P                                      
Subjt:  MDGSWSRRLSWGS----LIWDPWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP--------------------------------------

Query:  ------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR
                    TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR
Subjt:  ------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR

KAG2241183.1 hypothetical protein Bca52824_096833 [Brassica carinata]8.4e-2874.19Show/hide
Query:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR
        P EEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRP    P            TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR
Subjt:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR

TrEMBL top hitse value%identityAlignment
A0A2N9I0I7 Uncharacterized protein ycf682.5e-1763.95Show/hide
Query:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR-------------ESTFQTAAESMGRQE-TTWRTETS
        +D+ +  + TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR              STF+TAAESMGRQE TTWRTETS
Subjt:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR-------------ESTFQTAAESMGRQE-TTWRTETS

A0A4S8I540 Uncharacterized protein1.7e-1867.09Show/hide
Query:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR-------ESTFQTAAESMGRQETTWRTETS
        +D+ ++ + TLGWHSL  +    QT+KGLRWIPRHPETRKGV SDEMLR        STF+TAAESMGRQETTWRTETS
Subjt:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR-------ESTFQTAAESMGRQETTWRTETS

A0A5N6MLP8 Uncharacterized protein ycf684.1e-2042.77Show/hide
Query:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP-----------------------------------------------------------
        P EEDQVGPCEQLDALSPFNPLSE+RQKEGKSMDRP    P                                                           
Subjt:  PWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP-----------------------------------------------------------

Query:  -------------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR
                           TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR
Subjt:  -------------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR

A0A5N6PQS0 Uncharacterized protein1.6e-1944.74Show/hide
Query:  MDGSWSRRLSWGS----LIWDPWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP--------------------------------------
        MD +W+  +  GS    L     EEDQVGPCEQLDALSPFNPLSE+RQK G+ +  P  S+P                                      
Subjt:  MDGSWSRRLSWGS----LIWDPWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTP--------------------------------------

Query:  ------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR
                    TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR
Subjt:  ------------TLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR

A0A6A1ULF3 Uncharacterized protein3.5e-1966.67Show/hide
Query:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR------------ESTFQTAAESMGRQETTWRTETS
        +D+ +    TLGWHSL K++   QT+KGLRWIPRHPETRKGVVSDEMLR             STFQTAAESMGRQETTWRTETS
Subjt:  MDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLR------------ESTFQTAAESMGRQETTWRTETS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGTAGTTGGAGTCGGCGGCTCTCTTGGGGTTCCCTCATCTGGGATCCCTGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAA
CCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCATCGTCTCCACCCCCACCTTAGGATGGCATAGCCTTAAAAAGTTAAGGGCGAGGTTTCAAA
CGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGAGTCAACCTTTCAAACTGCTGCTGAATCCATGGGC
AGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGTAGTTGGAGTCGGCGGCTCTCTTGGGGTTCCCTCATCTGGGATCCCTGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAA
CCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCATCGTCTCCACCCCCACCTTAGGATGGCATAGCCTTAAAAAGTTAAGGGCGAGGTTTCAAA
CGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGAGTCAACCTTTCAAACTGCTGCTGAATCCATGGGC
AGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG
Protein sequenceShow/hide protein sequence
MDGSWSRRLSWGSLIWDPWEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPIVSTPTLGWHSLKKLRARFQTKKGLRWIPRHPETRKGVVSDEMLRESTFQTAAESMG
RQETTWRTETS