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Sed0008906 (gene) of Chayote v1 genome

Gene IDSed0008906
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationLG06:41479458..41479813
RNA-Seq ExpressionSed0008906
SyntenySed0008906
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034281.1 hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa]1.3e-1963.74Show/hide
Query:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF
        MG E DP+K VI+GIQLR PL+      + KE +H    EDQP TPTG++ RIRSGSKCPPAPKK +SSLKFNH+ ++R FFKPPDLE VF
Subjt:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF

KAE8648709.1 hypothetical protein Csa_009216 [Cucumis sativus]1.3e-2264Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV
        M  SENF++DMG E DP+K VI+GIQLR PL+      + KE  H    EDQP TPTG++ RI SGSKCPPAPKK +SSLKFNH G+VR FFKPPDLE V
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV

KAG6601529.1 Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2772.53Show/hide
Query:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF
        MG + DP+K VI+GIQ R PL+PIYTNP+ KE DH    EDQP TPTG+D RIRSGSKCPPAPKKR+SS+KFNH G+VR FFKPPDLE VF
Subjt:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF

XP_022726574.1 cyclin-dependent protein kinase inhibitor SMR6-like [Durio zibethinus]7.7e-2054.29Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLE
        MG+S   Q D GLES+ +K V++G+ LR+PL PIYTNPV   KE D  +G E + +TP G +++I +   CPPAP+KR+ SLKFN+ G VR FF PPDLE
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLE

Query:  AVFLS
        +VF S
Subjt:  AVFLS

XP_022957284.1 cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]5.7e-3171.29Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV
        MG SENFQ+ MG + DP+K VI+GIQ R PL+PIYTN + KE DH    EDQP TPTG+D RIRSGSKCPPAPKKR+SS+KFNH G+VR FFKPPDLE V
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0KVI5 Uncharacterized protein6.1e-2364Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV
        M  SENF++DMG E DP+K VI+GIQLR PL+      + KE  H    EDQP TPTG++ RI SGSKCPPAPKK +SSLKFNH G+VR FFKPPDLE V
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV

A0A2I4EHV5 cyclin-dependent protein kinase inhibitor SMR6-like3.1e-1956.44Show/hide
Query:  GLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF
        G +   Q D GLESD KK VI+GI LR+PL PIYTNPV +      G+E+  +TPTG ++RI +   CPPAP+KR+SSLK N+ G VR FF PPDLE+VF
Subjt:  GLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF

Query:  L
        +
Subjt:  L

A0A5A7SXV2 Uncharacterized protein6.3e-2063.74Show/hide
Query:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF
        MG E DP+K VI+GIQLR PL+      + KE +H    EDQP TPTG++ RIRSGSKCPPAPKK +SSLKFNH+ ++R FFKPPDLE VF
Subjt:  MGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVF

A0A6J1H1H9 cyclin-dependent protein kinase inhibitor SMR6-like2.7e-3171.29Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV
        MG SENFQ+ MG + DP+K VI+GIQ R PL+PIYTN + KE DH    EDQP TPTG+D RIRSGSKCPPAPKKR+SS+KFNH G+VR FFKPPDLE V
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAV

Query:  F
        F
Subjt:  F

A0A6P5XE04 cyclin-dependent protein kinase inhibitor SMR6-like3.7e-2054.29Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLE
        MG+S   Q D GLES+ +K V++G+ LR+PL PIYTNPV   KE D  +G E + +TP G +++I +   CPPAP+KR+ SLKFN+ G VR FF PPDLE
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVL--KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLE

Query:  AVFLS
        +VF S
Subjt:  AVFLS

SwissProt top hitse value%identityAlignment
Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR152.6e-1040.4Show/hide
Query:  FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL
        F       ++ KKCVI+GI L S + PI  +            ED+   P+TPT +  RI +   CPPAPKKR+ +LK ++    R FF PPDLE VF+
Subjt:  FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR61.2e-1244.55Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFK
        MG S+  Q + GLESD KK VI+GI +R+ L P+ T     P +    E D     E+  +TPT  +++I    +CPPAP+KRR +LK   +  VR FF 
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFK

Query:  PP-DLEAVFL
        PP DLE VFL
Subjt:  PP-DLEAVFL

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR83.4e-1044.94Show/hide
Query:  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL
        +D KK VI+GI  RSPL  I  +P +   +     +DQ P+TPT    RI     CP APKKR+ SLK ++    R +F PPDLE VF+
Subjt:  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein2.4e-1144.94Show/hide
Query:  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL
        +D KK VI+GI  RSPL  I  +P +   +     +DQ P+TPT    RI     CP APKKR+ SLK ++    R +F PPDLE VF+
Subjt:  SDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ-PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL

AT1G60783.1 unknown protein1.8e-1140.4Show/hide
Query:  FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL
        F       ++ KKCVI+GI L S + PI  +            ED+   P+TPT +  RI +   CPPAPKKR+ +LK ++    R FF PPDLE VF+
Subjt:  FQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQ---PSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFL

AT5G40460.1 unknown protein8.8e-1444.55Show/hide
Query:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFK
        MG S+  Q + GLESD KK VI+GI +R+ L P+ T     P +    E D     E+  +TPT  +++I    +CPPAP+KRR +LK   +  VR FF 
Subjt:  MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTN----PVL---KEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFK

Query:  PP-DLEAVFL
        PP DLE VFL
Subjt:  PP-DLEAVFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTTCAGAGAATTTCCAAGAAGATATGGGCTTGGAATCCGACCCCAAAAAATGTGTCATTTCCGGAATTCAATTACGATCTCCTTTAATGCCCATTTACACAAA
TCCGGTTCTCAAAGAACCCGATCACGGCCGCGGCGCTGAGGACCAACCGTCGACACCGACCGGCAACGACAGTCGAATCCGGTCCGGTTCGAAGTGCCCACCCGCCCCGA
AGAAGAGAAGATCTTCGCTCAAATTCAACCACGCCGGCGACGTTAGACCGTTCTTCAAGCCTCCGGATTTAGAGGCTGTCTTTTTGTCGACATGTCGACAACACACTAAT
TGA
mRNA sequenceShow/hide mRNA sequence
CCCTTTTTCCCACCACCCTAAAAATGGGACTTTCAGAGAATTTCCAAGAAGATATGGGCTTGGAATCCGACCCCAAAAAATGTGTCATTTCCGGAATTCAATTACGATCT
CCTTTAATGCCCATTTACACAAATCCGGTTCTCAAAGAACCCGATCACGGCCGCGGCGCTGAGGACCAACCGTCGACACCGACCGGCAACGACAGTCGAATCCGGTCCGG
TTCGAAGTGCCCACCCGCCCCGAAGAAGAGAAGATCTTCGCTCAAATTCAACCACGCCGGCGACGTTAGACCGTTCTTCAAGCCTCCGGATTTAGAGGCTGTCTTTTTGT
CGACATGTCGACAACACACTAATTGA
Protein sequenceShow/hide protein sequence
MGLSENFQEDMGLESDPKKCVISGIQLRSPLMPIYTNPVLKEPDHGRGAEDQPSTPTGNDSRIRSGSKCPPAPKKRRSSLKFNHAGDVRPFFKPPDLEAVFLSTCRQHTN