CuGenDBv2

Gene ID	Sed0008910
Organism	Sechium edule (Chayote v1)
Description	Transcription termination factor MTERF5
Genome location	LG04:39298769..39303039
RNA-Seq Expression	Sed0008910
Synteny	Sed0008910
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601088.1 Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-107

59.08

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISS FLL+FIQ RFVNT+S S LPLA  STI+FLKNSCGL   S S   RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKDM-QSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R SWLLT NLK + QSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKDM-QSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFVHA+RV +S++D+TWKKK NVLKSLGWSE EI  AFKK+P+CLACSEEKMR V DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD RLRPR++VLEVLM+K LI KNR I WLL  GER F+ + V KHL E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

XP_022957146.1 transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata]

4.7e-105

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISSTFLL+FIQ RF+NT+S S LPLA  STI+FLKNSCGL   S S   RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R+SWLLT N K  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFV A+RV LSMND+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFCFN AKLDPE+VI+ P 
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD RLRPR++V+EVL +K LI +NR I  LLV GER F+++ V KHL E+PDL++IYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

XP_022983916.1 transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima]

2.8e-105

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISSTFLL+FIQ RF+NT+SSS LPLA  STI+FLKNSCGL   S     RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R+SWLLT + K  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFVHA+RV +S++D+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD  LRPR++VLEVL +K LI KNR I WLL  GER F+ + V KHL E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

XP_023520498.1 transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.6e-105

58.27

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISS FLL+FIQ RFVNT+S S LPLA  STI+FLKNSCGL   S S   RKL+FDEKS++K+E+V  FLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R SWLLT NLK  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFVH++RV +S++D+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFC NTAKLDPE++I+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD RLRPR++VLEVLM+K LI KNR I WLL  GER F+ + V KHL E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

XP_038876362.1 transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida]

1.3e-107

58.81

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISSTFLL+FIQKRF+NT+SSS LPL   STI+FLKNSCGL         + L+ DEK+S K+E+++GF KS+GFDNSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLK-DMQSNTDVLIREGVPVRNVAKLVVWQPRI
                                        L+SQLKPSF F K ILE DE+VT AI R+SWLLT + K  MQSN +VL+REGV  RN+AKL+V QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLK-DMQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP A MFVHAVRV +SMNDSTWKKK NVLKSLGWSE EIFAAFK++P CL CSEEKMRDV DFCFNTAKLDP +VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F   LD RLRPRY+V+EVL  KNL+KKN+ I W+L++GER F+ + V KHL +IP L+D+YRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GYC4 transcription termination factor MTERF5, chloroplastic-like

5.6e-104

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISS FLL+FIQ RFVNT+SSS LPLA  STI+FLKNSCGL   S S   RKL+FDEKS++K+E+V  FLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R SWLLT NLK  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFVHA+RV +S++D+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD  LRPR++V+EVL +K LI KN  I WLL  GER F+ + V KHL E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

A0A6J1GYF2 transcription termination factor MTERF5, chloroplastic-like

2.3e-105

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISSTFLL+FIQ RF+NT+S S LPLA  STI+FLKNSCGL   S S   RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R+SWLLT N K  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFV A+RV LSMND+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFCFN AKLDPE+VI+ P 
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD RLRPR++V+EVL +K LI +NR I  LLV GER F+++ V KHL E+PDL++IYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

A0A6J1GZE2 transcription termination factor MTERF5, chloroplastic-like

5.6e-104

57.45

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISS FLL+FIQ RFVNT SSS LP A  STI+FLKNSCGL P S S   RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++L  DE+   AI R+SWLLT NLK  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I  KV+R++ AVK  K+LGIEP   MFV A+RV +SMND+TWKKK NVLKSLGWSE EI  AFKK+P+CLACSEEKMR V DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F +GLD  LRPR++V+EVL +K LI KN  I WLL+  ER F+++ V KHL E+PDL+DI+RG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

A0A6J1J3P9 transcription termination factor MTERF9, chloroplastic-like

1.3e-105

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISSTFLL+FIQ RF+NT+SSS LPLA  STI+FLKNSCGL   S     RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R+SWLLT + K  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LGIEP   MFVHA+RV +S++D+TWKKK NVLKSLGWSE EI  AFK++P+CLACSEEKMR V DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F  GLD  LRPR++VLEVL +K LI KNR I WLL  GER F+ + V KHL E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

A0A6J1J774 transcription termination factor MTERF9, chloroplastic-like

3.9e-105

57.99

Show/hide

Query:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------
        MSKISS FLL+FIQ RFVNT+SSS LP A  STI+FLKN+CGL   S S   RKL+FDEKS++K+E+V+GFLKSYGF+NSQIAK                
Subjt:  MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK----------------

Query:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI
                                       GL+S LKPSF F K++LE DE+   AI R+SWLLT NLK  MQSN +VL+ EGVP RN++KL+  QPR 
Subjt:  -------------------------------GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKD-MQSNTDVLIREGVPVRNVAKLVVWQPRI

Query:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK
        I QKV+RM+ AVK  K+LG+EP   MFV A+RV LSMND+TWKKK NVLKSLGWSE EI  AFK++P CLACSEEKMR   DFC NTAKLDPE+VI+ PK
Subjt:  ITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPK

Query:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE
         F +GLD  LRPR++VLEVL +K LI KNR I WLL  GER F+ + V K+L E+PDL+DIYRG   AE
Subjt:  LFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

1.0e-20

23.95

Show/hide

Query:  PLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK------------------------------------------
        P   S T+ +L +SCGL   S     R +K    SS+K +SV+   K +GF N QI                                            
Subjt:  PLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAK------------------------------------------

Query:  -----GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKDMQSNTDVLIRE-GVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPM
              L+ +L P +   K IL  +E V   + R     +  +    S    + RE GVP +++  LV   P     +  R    +      G +P    
Subjt:  -----GLNSQLKPSFYFFKKILELDEKVTAAIFRTSWLLTFNLKDMQSNTDVLIRE-GVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPM

Query:  FVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLI
        FVHA+      ++S  ++KF + +  GWS+ +  AA  + P C+  S+EK+   +++  N   L    ++  P +    ++ R++PR +V+ +L+ K L+
Subjt:  FVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLI

Query:  KK-NRNIGWLLVEGERRFLRHNVFKHLGEIPDLL
        KK + N   +L      F+   V K+  E+P L+
Subjt:  KK-NRNIGWLLVEGERRFLRHNVFKHLGEIPDLL

AT1G62490.1 Mitochondrial transcription termination factor family protein

3.3e-16

28.45

Show/hide

Query:  SKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIA------KGLNSQLKPSFY
        S  S++F         V+ I S K     + T+ +L +S GL         +K +F++K++   +SV+  L+S+GF  SQI+      K  +  L   + 
Subjt:  SKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIA------KGLNSQLKPSFY

Query:  FFKKILELDEKVTAAIFRTSWLLTFNLKDMQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWK
        F K+ LE D+         S+    NL++ + N  VL   G+P + +  L++   + +  K +R  +++K   ++G +P    FV A+ V   MND T +
Subjt:  FFKKILELDEKVTAAIFRTSWLLTFNLKDMQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWK

Query:  KKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVD
        +K NV K LG++  +++  FKK P+ L  SEEK+   ++
Subjt:  KKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVD

AT3G46950.1 Mitochondrial transcription termination factor family protein

2.7e-18

23.86

Show/hide

Query:  FIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAKGLNS-----------QLKPSFYFFK--
        F  K F +TI+    P   + T+ +L  S GL         +K+ F++K +   +SV+  L+S GF +SQI++ + +            L+P   F K  
Subjt:  FIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAKGLNS-----------QLKPSFYFFK--

Query:  -----KILE--------LDEKVTAAIFRTSWLLTFNLKDMQS---------------NTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDL
             +++E        LD+K   ++      +   ++D +S               N  VL   GVP + +  L++ + + +  K  +   ++K   D+
Subjt:  -----KILE--------LDEKVTAAIFRTSWLLTFNLKDMQS---------------NTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDL

Query:  GIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPF-----------------------------------CLACSEEKMRDVVDF
        G +P    FV A+ V   M++ T ++K NV K LG+SE EI+A FKK P+                                   C+  SE+K+ D ++ 
Subjt:  GIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPF-----------------------------------CLACSEEKMRDVVDF

Query:  CFN----------TAKLDP-------------------------ESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLI-KKNRNIGWLLVEGERRFLRHN
                       K  P                         E+V+  P + G+ L+ R+ PR  V++ LM K LI  +N  I  +LV  ++ FL+  
Subjt:  CFN----------TAKLDP-------------------------ESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLI-KKNRNIGWLLVEGERRFLRHN

Query:  VFKHLGEIPDLLDIY
        V KH   +P L+ I+
Subjt:  VFKHLGEIPDLLDIY

AT5G07900.1 Mitochondrial transcription termination factor family protein

9.6e-40

29.97

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Query:  SSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIA-----------------------------------------------
        S T+++L +SCGL P S +   RKL  D  S ++  +V+  L+ +GF  +QI+                                               
Subjt:  SSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIA-----------------------------------------------

Query:  KGLNSQLKPSFYFFKKILELDEKVTAAIFRTSWL-LTFNLKDMQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPMFVHA
        + L +QL PS+ F K +L+ DEK+ AA+ RT+W+ L  + K++  N + +   GVP + +  L+   P  + QK +   +  K A+++G  P    FV A
Subjt:  KGLNSQLKPSFYFFKKILELDEKVTAAIFRTSWL-LTFNLKDMQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPMFVHA

Query:  VRVRLSM-NDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLIKKN
        +       N S W K F V +  GWSE++I  AFKK P C+  SE K+   +++  N   + P S+  CP +    L+ R+ PR  V +VL+   L+K++
Subjt:  VRVRLSM-NDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLIKKN

Query:  RNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGIT
         ++  LLV  E+ FL   V K+  E+P+L+++Y G T
Subjt:  RNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGIT

AT5G64950.1 Mitochondrial transcription termination factor family protein

1.6e-18

24.66

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Query:  SSSKLPLAPSST--IDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAKGLNSQLKPSFYFFKKILE-----------------
        SS+  P + S+   ++FL+++    P + +   R      KS ++  SV+  LKSY F ++QI K +    +  FY  +KILE                 
Subjt:  SSSKLPLAPSST--IDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAKGLNSQLKPSFYFFKKILE-----------------

Query:  -------------------------------LDEKVTAAIFRTSWLLTFNLKD--MQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKD
                                         E +   + R  WLL     +  +  N   L   G+    +A L+  QPRI      ++   V  A D
Subjt:  -------------------------------LDEKVTAAIFRTSWLLTFNLKD--MQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKD

Query:  LGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVL
        LG    + M VHAV    S+++ T+ +K  +  + G+SE+EI    ++ P  + CSE+K+    +F      L+ E++   P +  + L+ R+ PR +VL
Subjt:  LGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPFCLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVL

Query:  EVLMMKNLI----KKNRNIGWLLVEGERRFLRHNVFKHLGEI-PDLLDIYRGITPAEPDLFYKIE
        ++L  K L+    KK +N+  ++   E  FL   V +   EI  +LL  Y+ +   +  L  +I+
Subjt:  EVLMMKNLI----KKNRNIGWLLVEGERRFLRHNVFKHLGEI-PDLLDIYRGITPAEPDLFYKIE

Sequences

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CDS sequence

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ATGTCTAAAATCTCTTCAACATTTCTGCTATTTTTCATCCAAAAACGTTTCGTCAATACGATTTCGAGCTCCAAATTGCCGTTGGCGCCTTCATCTACGATCGATTTCCT
CAAGAATTCGTGTGGGCTCGATCCAGCATCTCGTTCTTACGGCAAGCGAAAGCTGAAATTCGACGAAAAAAGCTCCCAAAAGTTCGAATCTGTTGTTGGTTTTTTGAAAT
CGTATGGATTCGACAATTCCCAGATCGCAAAGGGATTAAATTCTCAATTGAAACCATCGTTTTATTTCTTTAAGAAAATACTTGAATTGGACGAGAAAGTTACTGCTGCG
ATTTTTCGAACTTCATGGCTTCTTACGTTTAATTTAAAGGATATGCAATCCAACACTGATGTTTTGATCCGTGAAGGAGTACCTGTTAGGAATGTAGCGAAATTGGTTGT
GTGGCAGCCTAGGATCATTACCCAAAAGGTTAATAGAATGATTTCTGCAGTGAAAATGGCTAAGGATTTGGGGATTGAACCAATGGCCCCCATGTTTGTTCACGCGGTTC
GCGTAAGGCTTTCCATGAACGACTCGACTTGGAAGAAGAAATTTAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTGCAGCCTTTAAGAAAGAGCCGTTT
TGTTTGGCTTGTTCTGAGGAGAAAATGAGAGATGTGGTTGATTTTTGTTTCAACACTGCTAAGTTAGACCCTGAAAGTGTAATCACTTGCCCCAAGTTATTCGGTCATGG
ACTCGATACGCGGCTTCGCCCGAGGTACAGGGTTCTTGAGGTTTTGATGATGAAGAATTTGATTAAGAAGAACAGAAACATTGGTTGGTTGCTGGTAGAAGGGGAGAGAC
GCTTTCTGAGGCATAATGTTTTTAAGCATTTGGGTGAAATCCCAGATCTCTTGGACATATACCGTGGCATTACCCCAGCCGAACCCGATCTGTTTTATAAGATTGAAAGC
TTGTAA

mRNA sequence

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Protein sequence

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MSKISSTFLLFFIQKRFVNTISSSKLPLAPSSTIDFLKNSCGLDPASRSYGKRKLKFDEKSSQKFESVVGFLKSYGFDNSQIAKGLNSQLKPSFYFFKKILELDEKVTAA
IFRTSWLLTFNLKDMQSNTDVLIREGVPVRNVAKLVVWQPRIITQKVNRMISAVKMAKDLGIEPMAPMFVHAVRVRLSMNDSTWKKKFNVLKSLGWSENEIFAAFKKEPF
CLACSEEKMRDVVDFCFNTAKLDPESVITCPKLFGHGLDTRLRPRYRVLEVLMMKNLIKKNRNIGWLLVEGERRFLRHNVFKHLGEIPDLLDIYRGITPAEPDLFYKIES
L

Sed0008910 (gene) of Chayote v1 genome