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Sed0008912 (gene) of Chayote v1 genome

Gene IDSed0008912
OrganismSechium edule (Chayote v1)
DescriptionDihydroorotate dehydrogenase, putative
Genome locationLG06:35512402..35516707
RNA-Seq ExpressionSed0008912
SyntenySed0008912
Gene Ontology termsNA
InterPro domainsIPR009297 - Protein of unknown function DUF952


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606920.1 hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5386.78Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ SQS+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDGR++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

XP_022948943.1 uncharacterized protein LOC111452443 [Cucurbita moschata]1.2e-5386.78Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ SQS+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDGR++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

XP_022998502.1 uncharacterized protein LOC111493116 [Cucurbita maxima]3.4e-5385.95Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ SQS+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDG+++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

XP_023525461.1 uncharacterized protein LOC111789057 isoform X1 [Cucurbita pepo subsp. pepo]9.9e-5385.12Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ S+S+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDG+++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

XP_038905017.1 uncharacterized protein LOC120091189 [Benincasa hispida]8.4e-5284.87Show/hide
Query:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV
        E+FVYRIS+SKEW +SQ +G +YGGDFDKSSGFIHLS LNQV STLQNFFLN K+ELYLLQIEAKKLGDGLIYELVDGSN+FPHFYGPSRSF PIP+DAV
Subjt:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV

Query:  TKAEKLTFSDGRYSCSFLK
        TKAEKLTFSDGR++CSFL+
Subjt:  TKAEKLTFSDGRYSCSFLK

TrEMBL top hitse value%identityAlignment
A0A1S3BHG9 uncharacterized protein LOC1034899011.9e-4981.51Show/hide
Query:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV
        EEFVYRIS+SKEW +SQ LG +YGG  DKSSGFIHLS LNQV STLQNFFLN K++LYLLQIEAKKLGDGLIYELVDG N+FPHFYGPSRSF PIP+DAV
Subjt:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV

Query:  TKAEKLTFSDGRYSCSFLK
        TKA+K+TFSDGR+SCS L+
Subjt:  TKAEKLTFSDGRYSCSFLK

A0A5D3DA97 Uncharacterized protein1.9e-4981.51Show/hide
Query:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV
        EEFVYRIS+SKEW +SQ LG +YGG  DKSSGFIHLS LNQV STLQNFFLN K++LYLLQIEAKKLGDGLIYELVDG N+FPHFYGPSRSF PIP+DAV
Subjt:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV

Query:  TKAEKLTFSDGRYSCSFLK
        TKA+K+TFSDGR+SCS L+
Subjt:  TKAEKLTFSDGRYSCSFLK

A0A6J1DWP8 uncharacterized protein LOC1110238382.5e-4980.83Show/hide
Query:  AEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDA
        A+EFVYRIS+SKEW++S+S G +YGG+FD  SGFIHLS LNQV  TLQNFF N+KEELYLLQIE KKLGDGLIYELVDGSN+FPHFYGPSRSF PIPIDA
Subjt:  AEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDA

Query:  VTKAEKLTFSDGRYSCSFLK
        VTKAEKLT S GRY+CSFL+
Subjt:  VTKAEKLTFSDGRYSCSFLK

A0A6J1GAQ2 uncharacterized protein LOC1114524435.7e-5486.78Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ SQS+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDGR++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

A0A6J1K865 uncharacterized protein LOC1114931161.6e-5385.95Show/hide
Query:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID
        +AEEFVYRIS SKEW+ SQS+G L+GGDFD SSGFIHLS LNQV STLQNFFLNSKEELYLLQIEAKKLGDGL+YELVDGSN+FPHFYGPSRSF PIPID
Subjt:  MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPID

Query:  AVTKAEKLTFSDGRYSCSFLK
        AVTKAEKLTFSDG+++CSFL+
Subjt:  AVTKAEKLTFSDGRYSCSFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01897.1 unknown protein1.0e-3959.32Show/hide
Query:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV
        EEF+YRIS+ +EW++ +  G  YG + DKS+ + HLS+L+QV  TL+NFF++ KE LYLLQ++ KKLGDGLIYE VD  N+FPHFYGP ++F+P+P+D+V
Subjt:  EEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAV

Query:  TKAEKLTFSDGRYSCSFL
         KAEKLTF +G ++CSFL
Subjt:  TKAEKLTFSDGRYSCSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGTTTGTATACAGAATTAGTTCATCCAAGGAGTGGAAGCAATCACAGAGCCTCGGTCTTCTCTATGGAGGCGACTTCGATAAATCTTCTGGTTTCATTCA
TCTCAGTCGCCTCAATCAGGTCCTGTCAACTTTGCAGAATTTCTTCCTGAATAGCAAGGAGGAATTGTATCTTCTTCAAATTGAGGCCAAAAAGCTTGGTGATGGATTAA
TATATGAACTTGTGGATGGTTCCAACACCTTCCCTCATTTCTACGGTCCATCTCGAAGCTTCATACCTATCCCTATAGATGCAGTAACCAAAGCAGAGAAACTAACTTTT
TCTGATGGCCGATATTCTTGTAGTTTTCTCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAGTTTGTATACAGAATTAGTTCATCCAAGGAGTGGAAGCAATCACAGAGCCTCGGTCTTCTCTATGGAGGCGACTTCGATAAATCTTCTGGTTTCATTCA
TCTCAGTCGCCTCAATCAGGTCCTGTCAACTTTGCAGAATTTCTTCCTGAATAGCAAGGAGGAATTGTATCTTCTTCAAATTGAGGCCAAAAAGCTTGGTGATGGATTAA
TATATGAACTTGTGGATGGTTCCAACACCTTCCCTCATTTCTACGGTCCATCTCGAAGCTTCATACCTATCCCTATAGATGCAGTAACCAAAGCAGAGAAACTAACTTTT
TCTGATGGCCGATATTCTTGTAGTTTTCTCAAATAG
Protein sequenceShow/hide protein sequence
MAEEFVYRISSSKEWKQSQSLGLLYGGDFDKSSGFIHLSRLNQVLSTLQNFFLNSKEELYLLQIEAKKLGDGLIYELVDGSNTFPHFYGPSRSFIPIPIDAVTKAEKLTF
SDGRYSCSFLK