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Sed0008920 (gene) of Chayote v1 genome

Gene IDSed0008920
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG04:47040636..47041053
RNA-Seq ExpressionSed0008920
SyntenySed0008920
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]2.5e-3480.95Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        M LR LLKRN+GVSA+PKG+CAVYVG+SQKKRF I IAYLN+PCFQELLCQTEEEFGY+HPMGGLTIHCR+DIF + I+H+NDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]5.7e-3182.28Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLIT
        MG+RQLLKRNQGVS IPKG+CAVYVGE+QKKRF I I +LNQ CFQELL QTEE+FGYHHPMGGLTIHCR+DIF DLI+
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLIT

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2565.52Show/hide
Query:  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN
        M L QLL+R      +GV+ +PKG+CAVYVGE QKKRF I + YLNQPCFQ+LL Q E+EFGY+HPMGGLTI CR DIF +LI+ LN
Subjt:  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]2.5e-3179.76Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        M L  LLKR+QGVS+IPKG+CAVYVGESQKKRF I I+YLNQPCFQELL QTEEEFGYHHPMGGLTIHC++ IF +LI+ LNDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]3.4e-3686.9Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        MGLRQLLKRNQGVSA+PKG+CAVYVGESQKKRF I I+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHCR+DIF DLI+ LNDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein4.5e-3480.95Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        M L+ LLKRNQGVSA+PKG+CAVYVGESQKKRF I I YLN+PCFQ+LLCQTEEEFGY+HPMGGLTIHCR+DIF DLI+++NDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

A0A0A0K5U4 Uncharacterized protein1.2e-3179.76Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        M L  LLKR+QGVS+IPKG+CAVYVGESQKKRF I I+YLNQPCFQELL QTEEEFGYHHPMGGLTIHC++ IF +LI+ LNDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

A0A0A0K5V1 Uncharacterized protein6.3e-2870.45Show/hide
Query:  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLND
        MGLR+LL+R     NQ VS +PKG+CAVYVGE+QKKRF I I YLNQPCFQ+LL QT EEF Y+HPMGGLT HC +DIF DLI+HLN+
Subjt:  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLND

A0A5A7U363 Auxin-induced protein 15A-like1.2e-3480.95Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        M LR LLKRN+GVSA+PKG+CAVYVG+SQKKRF I IAYLN+PCFQELLCQTEEEFGY+HPMGGLTIHCR+DIF + I+H+NDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.7e-3686.9Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL
        MGLRQLLKRNQGVSA+PKG+CAVYVGESQKKRF I I+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHCR+DIF DLI+ LNDL
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.7e-2057.5Show/hide
Query:  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN
        +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L+
Subjt:  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN

Q9FJF7 Auxin-responsive protein SAUR227.2e-2156.1Show/hide
Query:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++E+EFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL

Q9FJF9 Auxin-responsive protein SAUR216.1e-2055.56Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+   SA PKG  AVYVGESQKKR+ + ++YL+QP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL

Q9FJG0 Auxin-responsive protein SAUR202.7e-2058.97Show/hide
Query:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDL
        +G +++L R+    SA PKG  AVYVGESQKKR+ + I+YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++
Subjt:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDL

Q9FK62 Auxin-responsive protein SAUR242.5e-2157.32Show/hide
Query:  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+ G  SA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family1.9e-2158.97Show/hide
Query:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDL
        +G +++L R+    SA PKG  AVYVGESQKKR+ + I+YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++
Subjt:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDL

AT5G18030.1 SAUR-like auxin-responsive protein family4.3e-2155.56Show/hide
Query:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+   SA PKG  AVYVGESQKKR+ + ++YL+QP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL

AT5G18050.1 SAUR-like auxin-responsive protein family5.1e-2256.1Show/hide
Query:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++E+EFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL

AT5G18060.1 SAUR-like auxin-responsive protein family3.3e-2157.5Show/hide
Query:  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN
        +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L+
Subjt:  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.8e-2257.32Show/hide
Query:  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL
        +G +++L R+ G  SA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPMGGLTI C  D FI++ + L
Subjt:  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAGCCATTCCCAAGGGCCATTGTGCAGTCTATGTAGGAGAGAGCCAAAAGAAGCGATTTTTTATC
CTGATAGCGTACTTGAATCAACCATGTTTTCAAGAGCTGCTTTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCTATGGGTGGCCTTACTATTCATTGCAGA
AATGACATTTTCATTGATCTCATCACTCATTTAAATGATCTATGA
mRNA sequenceShow/hide mRNA sequence
CTCCTTCAAAAAAACTCTCTTTCTCTCCAAAACGGATTTGACGATTCGTGTTGGTCGAAGTGTGTGAATTATATCGTACAAACATGGGGCTTCGCCAACTTCTCA
AAAGAAACCAAGGAGTTTCAGCCATTCCCAAGGGCCATTGTGCAGTCTATGTAGGAGAGAGCCAAAAGAAGCGATTTTTTATCCTGATAGCGTACTTGAATCAAC
CATGTTTTCAAGAGCTGCTTTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCTATGGGTGGCCTTACTATTCATTGCAGAAATGACATTTTCATTGATCTCA
TCACTCATTTAAATGATCTATGAGTGATGTTACAACATTTTAGTAAACAATCAATCTTGTAGGATAGGAACATTAGAAATAGCCAAAACCATGTACATTTTTT
Protein sequenceShow/hide protein sequence
MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL