CuGenDBv2

Gene ID	Sed0008945
Organism	Sechium edule (Chayote v1)
Description	serine/arginine-rich splicing factor 11
Genome location	LG04:3276866..3281286
RNA-Seq Expression	Sed0008945
Synteny	Sed0008945
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

3.8e-64

90.71

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS  TS SSDSSSSSSR RRRRRTRREKDR+ LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSSESEPE S RSKRHKKN+R KKDK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS++HHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

2.1e-67

91.8

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Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS ATS++SDSSSSSSR RRRRR+RR+KDR+ LRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSS+SEPE SGRSKRHKKN+R KKDK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSK+HHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022931719.1 serine/arginine-rich splicing factor 11 isoform X1 [Cucurbita moschata]

1.0e-61

89.62

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Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS A+ Y+SDSSSSSSR RRRRRTRREKDRN LRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSS+SEPE+SGRSKRHKKN+  K  K
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSK+ HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

3.0e-61

88.52

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAA+SS ATS SSDSSSSSSR RRRR+TRR+KDR+ LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR +SSSESEPE S RSKRHKKN+R KKDK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS++HHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

3.8e-64

89.07

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Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS ATSY+SDSSSSSSR RRRRR RREKDR+ LR+RKKSRSHSKR RRHRRSSSDSLSSSDSESDYSR++SSS+SEPE SGRSKRHK+N+R K+DK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS++HHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

1.8e-64

90.71

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS  TS SSDSSSSSSR RRRRRTRREKDR+ LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSSESEPE S RSKRHKKN+R KKDK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS++HHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

1.0e-67

91.8

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS ATS++SDSSSSSSR RRRRR+RR+KDR+ LRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSS+SEPE SGRSKRHKKN+R KKDK
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSK+HHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1EV15 serine/arginine-rich splicing factor 11 isoform X1

5.0e-62

89.62

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS A+ Y+SDSSSSSSR RRRRRTRREKDRN LRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSS+SEPE+SGRSKRHKKN+  K  K
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSK+ HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1F093 NKAP family protein isoform X2

1.9e-61

89.07

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS A+ Y+SDSSSSSSR RRRRRTRREKDRN LRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSS+SEPE+SGRSKRHKKN+  KK  
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         RERSK+ HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

1.9e-61

89.07

Show/hide

Query:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        MAASSS A+ Y+SDSSSSSSR RRRRRTRREKDR+ LRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSS+SEPE+SGRSKRHKKN+  K  K
Subjt:  MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSK+ HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

2.0e-34

61.75

Show/hide

Query:  AASSSLATSYSSDSSSSSSRLRRRRRTRR-EKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        A+SSS ++  SSDSS S  R + RR  RR ++DR+ L++RKKSRS SK+RRR R+ SSDS       SD S SDSSSES      +S+RHKK+E+ KK K
Subjt:  AASSSLATSYSSDSSSSSSRLRRRRRTRR-EKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ++ERSK+H HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein

2.0e-34

61.75

Show/hide

Query:  AASSSLATSYSSDSSSSSSRLRRRRRTRR-EKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK
        A+SSS ++  SSDSS S  R + RR  RR ++DR+ L++RKKSRS SK+RRR R+ SSDS       SD S SDSSSES      +S+RHKK+E+ KK K
Subjt:  AASSSLATSYSSDSSSSSSRLRRRRRTRR-EKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDK

Query:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ++ERSK+H HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  ERERSKTHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCGTCTTCGTTGGCGACATCCTACTCTTCCGATTCATCATCTTCTTCTTCTCGTCTTCGCCGCCGCCGGAGAACTCGCCGTGAAAAAGATCGAAACGGCCT
TAGGATTCGCAAGAAATCTCGCTCTCATTCTAAACGCCGTCGCAGACACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGACTACTCTCGAAGTG
ATAGTTCTTCTGAAAGCGAGCCTGAAGTGTCAGGACGGTCAAAGCGGCATAAGAAGAATGAGAGAGTGAAGAAGGATAAGGAGAGGGAGCGAAGTAAGACTCATCACCAT
AAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGAAGGACGACGGTGCTCGACGGAG
TGCTGTCTCTGGCAAAAAGATATTGTTAAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACT
AA

mRNA sequence

Show/hide mRNA sequence

TTTAAATATTTTGCTAACAAACACCCCATTGAGCCCTTTCCAAAACCATATTCGCACTCTTTTTGCAATCGATGGCGGCCTCGTCTTCGTTGGCGACATCCTACTCTTCC
GATTCATCATCTTCTTCTTCTCGTCTTCGCCGCCGCCGGAGAACTCGCCGTGAAAAAGATCGAAACGGCCTTAGGATTCGCAAGAAATCTCGCTCTCATTCTAAACGCCG
TCGCAGACACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGACTACTCTCGAAGTGATAGTTCTTCTGAAAGCGAGCCTGAAGTGTCAGGACGGT
CAAAGCGGCATAAGAAGAATGAGAGAGTGAAGAAGGATAAGGAGAGGGAGCGAAGTAAGACTCATCACCATAAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAA
GAGAGAAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGAAGGACGACGGTGCTCGACGGAGTGCTGTCTCTGGCAAAAAGATATTGTTAAAACTTGATAA
ATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAATGGCTGACTTTGAAATGAAGGAAAGAAGGAAATGATA
GAATGGAATTGTTTGCTGCTGCATGAGACATGGTTGTGTTGATTAAGTTGTGCTTAATAACTTTCTTCCCTTAATGTTTTGATGCATATGGATTGAGATCTATTTTAATT
CCTTATGAAAAGGAATTGAAATTTTACTGAAAAATAATTTAGCCTGTTTGATTTTCTCTAAATAACCATTTTGATTTATGTTATGGATTGAGATGGGATGAATGATTGAT
TGATTACCAGTTTTAATGATTATGGTAC

Protein sequence

Show/hide protein sequence

MAASSSLATSYSSDSSSSSSRLRRRRRTRREKDRNGLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSESEPEVSGRSKRHKKNERVKKDKERERSKTHHH
KRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sed0008945 (gene) of Chayote v1 genome