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Sed0008972 (gene) of Chayote v1 genome

Gene IDSed0008972
OrganismSechium edule (Chayote v1)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Genome locationLG05:44537637..44545439
RNA-Seq ExpressionSed0008972
SyntenySed0008972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605077.1 Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3592.05Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKNSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

KAG7035086.1 hypothetical protein SDJN02_01881 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3490.91Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKN+ETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

XP_022946978.1 uncharacterized protein LOC111450996 [Cucurbita moschata]7.5e-3490.91Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPI SCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKNSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

XP_023006871.1 uncharacterized protein LOC111499535 [Cucurbita maxima]8.8e-3592.05Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKNSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

XP_023513344.1 uncharacterized protein LOC111777852 [Cucurbita pepo subsp. pepo]4.4e-3489.77Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQKDK  AAANPPIPSCRKKK+E+ TF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVAD+NSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

TrEMBL top hitse value%identityAlignment
A0A1S3CDL9 uncharacterized protein LOC1034996746.2e-3488.64Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K   AANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVAD+NSET+GVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

A0A5A7TRS7 Uncharacterized protein6.2e-3488.64Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K   AANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVAD+NSET+GVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

A0A6J1G5B9 uncharacterized protein LOC1114509963.6e-3490.91Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPI SCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKNSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

A0A6J1J859 uncharacterized protein LOC1114843286.2e-3488.64Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        ME+QKDK  AAANPPIPSCRKKK+E+ TF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVAD+NSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

A0A6J1KX05 uncharacterized protein LOC1114995354.3e-3592.05Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE
        MEQQK+K  AAANPPIPSCRKKK+EEATF+EDLKDHIDEFIHASMDEHKSCFKKTINKMF MSKVVADKNSETSGVESSL LRTTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.1.7e-1247.83Show/hide
Query:  KQPAAANPPIP-----SCRKK-KSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKM---FCMSKVVADKNSETSG-VESSLHLRTTVSE
        K+    NPP P     SCRK+ K + ATF  +LKDH+DEFIHASMDEHK+CFK T++K+   F  ++ VA+K  E    VE    L+T V++
Subjt:  KQPAAANPPIP-----SCRKK-KSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKM---FCMSKVVADKNSETSG-VESSLHLRTTVSE

AT3G05570.1 unknown protein1.7e-2059.14Show/hide
Query:  MEQQKDKQPAAANPPIP---SCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETS--GVESSLHLRTTVSE
        ME QK +   A NPP P   SCRKK  ++A F+ED+KDHID+FI+ASMD+HK+CF KTI KMF +SK VADK    +  GVES L L+TTVS+
Subjt:  MEQQKDKQPAAANPPIP---SCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETS--GVESSLHLRTTVSE

AT4G39235.1 unknown protein1.1e-2262.92Show/hide
Query:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNS-ETSGVESSLHLRTTVSE
        ME Q ++ P    P + SCRKK  ++ATF ED+KDHID+FIHASMDEHKSCF+KTI KMF +SK VA+K + E  GVES L L+TTVSE
Subjt:  MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNS-ETSGVESSLHLRTTVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAACAAAAGGATAAACAACCAGCTGCTGCAAATCCCCCCATCCCTTCTTGTCGAAAGAAGAAGAGCGAAGAAGCTACATTCATGGAGGATTTGAAGGATCACAT
CGACGAGTTCATTCACGCATCAATGGACGAACACAAATCGTGCTTCAAGAAAACCATTAACAAGATGTTCTGTATGTCAAAAGTTGTGGCAGATAAGAATTCGGAGACGA
GTGGAGTTGAAAGTTCTTTGCATCTTCGAACAACAGTATCAGAATAA
mRNA sequenceShow/hide mRNA sequence
GTTTATCAAACACTAATTTATTCTGACTTCTCATCCTTTTCCTTCCCACCCTAACCAAACAAGCTCTAAAGAAAAAGAAATAAAGAAAAGGATATCTTCTTTCTGTCGCG
CGAACGATCCCCTCACCGCCCAGCCTTCCGTTTTGCGTAGCTCAGCCGCCGCCGCCGCCGCCATCGTGAAGCAGGCTGATTTGCGTGGGTGTTCGAGAGTCAGCCGAGCG
GTTTTCTTTTACCCGATCTGATCGCCAGCGGTTTGTAGAGCTTCTCTTGCGATTCCTCGCTCTTACTGTAGCTGTTAAATTCAATGGAACAACAAAAGGATAAACAACCA
GCTGCTGCAAATCCCCCCATCCCTTCTTGTCGAAAGAAGAAGAGCGAAGAAGCTACATTCATGGAGGATTTGAAGGATCACATCGACGAGTTCATTCACGCATCAATGGA
CGAACACAAATCGTGCTTCAAGAAAACCATTAACAAGATGTTCTGTATGTCAAAAGTTGTGGCAGATAAGAATTCGGAGACGAGTGGAGTTGAAAGTTCTTTGCATCTTC
GAACAACAGTATCAGAATAAATTCTCTTTTGTCCTTTGTGCAAGGATAGTTTGTCTGCATCTTGAACCAACCAACTCCATGTAGATTTTACTGTTGGTTTTCCTTGTTCA
GCTTTCGAAAAATGTTATATTTTGAGGTTTTAACACTCAACCAATACTGGTCTTTGGATTTTCTTTCTTGCTTTCTAACCTCTTTCATAATGAGCAGTTTCTTTATGAGG
TCTTAA
Protein sequenceShow/hide protein sequence
MEQQKDKQPAAANPPIPSCRKKKSEEATFMEDLKDHIDEFIHASMDEHKSCFKKTINKMFCMSKVVADKNSETSGVESSLHLRTTVSE