; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008990 (gene) of Chayote v1 genome

Gene IDSed0008990
OrganismSechium edule (Chayote v1)
DescriptionLateral organ boundaries (LOB) domain family protein
Genome locationLG01:11844777..11845257
RNA-Seq ExpressionSed0008990
SyntenySed0008990
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055253.1 elongated petiolule 1 [Cucumis melo var. makuwa]4.0e-5369.82Show/hide
Query:  MESTTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQ
        M STT   +YYSPCAACKFLRRKCL GCVFAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC  AI FLQKQ+Q
Subjt:  MESTTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQ

Query:  RLQKELDAAKAHLFLYSCTDFSAPFSSQ-PQIISP--DPLIW-----NNNNLYDDVCANNSSVYFNGGI
        RLQKELDAAKA LFLYSCTDFS PF  Q PQII+    PLIW     NNNN +DD+  NN S+YFNGGI
Subjt:  RLQKELDAAKAHLFLYSCTDFSAPFSSQ-PQIISP--DPLIW-----NNNNLYDDVCANNSSVYFNGGI

XP_022924080.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata]1.2e-5471.97Show/hide
Query:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK
        T T +YYSPCAACKFLRRKC+ GC+FAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC AAI FLQKQ+QRLQ 
Subjt:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK

Query:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        ELDAAKA L LYSCTDFS PFS QPQIISP PL+WN+N    D+ + NSSVYFNGGI
Subjt:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

XP_022994675.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima]1.1e-5372.33Show/hide
Query:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL
        S T+T +YYSPCAACKFLRRKC+ GCV+APYFPPE+P+KFANVHKVFGASNVAKLLN                  EARI+DPVYGC  AI FLQKQ+QRL
Subjt:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL

Query:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        QKELDAAKA L L+S TDFSAPFSSQPQIISP P+IWN+NN YD V A NSS+YFNGGI
Subjt:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

XP_023000702.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima]1.1e-5371.34Show/hide
Query:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK
        T T +YYSPCAACKFLRRKC+ GC+FAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC AAI FLQKQ+QRLQ 
Subjt:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK

Query:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        ELDAAKA L LYSCTDFS PFS Q QIISP PL+WN+N    D+ + NSSVYFNGGI
Subjt:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

XP_023519026.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]3.6e-5471.97Show/hide
Query:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK
        T T  YYSPCAACKFLRRKC+ GC+FAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC AAI FLQKQ+QRLQ 
Subjt:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK

Query:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        ELDAAKA L LYSCTDFS PFS QPQIISP PL+WN+N    D+ + NSSVYFNGGI
Subjt:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

TrEMBL top hitse value%identityAlignment
A0A5D3BJ87 Elongated petiolule 11.9e-5369.82Show/hide
Query:  MESTTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQ
        M STT   +YYSPCAACKFLRRKCL GCVFAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC  AI FLQKQ+Q
Subjt:  MESTTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQ

Query:  RLQKELDAAKAHLFLYSCTDFSAPFSSQ-PQIISP--DPLIW-----NNNNLYDDVCANNSSVYFNGGI
        RLQKELDAAKA LFLYSCTDFS PF  Q PQII+    PLIW     NNNN +DD+  NN S+YFNGGI
Subjt:  RLQKELDAAKAHLFLYSCTDFSAPFSSQ-PQIISP--DPLIW-----NNNNLYDDVCANNSSVYFNGGI

A0A6J1EDS7 protein LATERAL ORGAN BOUNDARIES-like6.0e-5571.97Show/hide
Query:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK
        T T +YYSPCAACKFLRRKC+ GC+FAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC AAI FLQKQ+QRLQ 
Subjt:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK

Query:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        ELDAAKA L LYSCTDFS PFS QPQIISP PL+WN+N    D+ + NSSVYFNGGI
Subjt:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

A0A6J1GT86 protein LATERAL ORGAN BOUNDARIES-like7.4e-5371.07Show/hide
Query:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL
        S T+T +YYSPCAAC+FLRRKC+ GCV+APYFPPE+P+KFANVHKVFGASNVAKLLN                  EARI+DPVYGC  AI  LQKQ+QRL
Subjt:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL

Query:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        QKELDAAKA L L+S TDFSAPFSSQPQIISP P+IWN+NN YD V A NSS+YFNGGI
Subjt:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

A0A6J1K206 protein LATERAL ORGAN BOUNDARIES-like5.1e-5472.33Show/hide
Query:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL
        S T+T +YYSPCAACKFLRRKC+ GCV+APYFPPE+P+KFANVHKVFGASNVAKLLN                  EARI+DPVYGC  AI FLQKQ+QRL
Subjt:  STTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRL

Query:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        QKELDAAKA L L+S TDFSAPFSSQPQIISP P+IWN+NN YD V A NSS+YFNGGI
Subjt:  QKELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

A0A6J1KEE2 protein LATERAL ORGAN BOUNDARIES-like5.1e-5471.34Show/hide
Query:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK
        T T +YYSPCAACKFLRRKC+ GC+FAPYFPPEEP+KFANVHKVFGASNVAKLLN                  EARIRDPVYGC AAI FLQKQ+QRLQ 
Subjt:  TKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQK

Query:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI
        ELDAAKA L LYSCTDFS PFS Q QIISP PL+WN+N    D+ + NSSVYFNGGI
Subjt:  ELDAAKAHLFLYSCTDFSAPFSSQPQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI

SwissProt top hitse value%identityAlignment
O04479 Protein ASYMMETRIC LEAVES 22.3e-2759.05Show/hide
Query:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLNE------------------ARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA
        SPCAACKFLRRKC   CVFAPYFPP++P+KFANVHKVFGASNV KLLNE                   R+RDPVYGC   I  LQ QL++LQ +L  AK+
Subjt:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLNE------------------ARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA

Query:  HLFLY
         L  Y
Subjt:  HLFLY

Q8L8Q3 LOB domain-containing protein 259.4e-2955.86Show/hide
Query:  TQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKEL
        + Y  SPCAACKFLRRKC   CVFAPYFPPEEP KFANVH++FGASNV+K+L+                  EAR++DPVYGC  AI  LQ+Q+ RLQ+EL
Subjt:  TQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKEL

Query:  DAAKAHLFLYS
        +   A L  Y+
Subjt:  DAAKAHLFLYS

Q8LBW3 LOB domain-containing protein 122.5e-2643.54Show/hide
Query:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLNE------------------ARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA
        SPCA+CK LRR+C   C+FAPYFPP++P KFA VHKVFGASNV+K+L E                  AR+RDPVYGC  AI +LQ Q+ +LQ +L  A+A
Subjt:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLNE------------------ARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA

Query:  HLFLYSCTDFSAPFSSQPQIISPD----PLIWNNNNLYDDVCANNSS
         +      +      S  Q++  D     L+ NNNN+ +    NN++
Subjt:  HLFLYSCTDFSAPFSSQPQIISPD----PLIWNNNNLYDDVCANNSS

Q9FKZ3 LOB domain-containing protein 362.0e-2652Show/hide
Query:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA
        SPCAACKFLRRKC   CVFAPYFPP++P+KFA VHKVFGASNVAKLLN                  EAR+RDPVYGC   I  LQ +L+++  +L+ AK 
Subjt:  SPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKA

Query:  HLFLYSCTDFSAPFSSQPQIISPDP
         L  Y       P   QP  +S  P
Subjt:  HLFLYSCTDFSAPFSSQPQIISPDP

Q9FML4 Protein LATERAL ORGAN BOUNDARIES1.1e-3458.46Show/hide
Query:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA
        Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN                  EAR+RDPVYGC  AI +LQ+Q+ RLQKELDAA
Subjt:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA

Query:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL
         A L  Y  S +   AP +    +  P PL
Subjt:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL

Arabidopsis top hitse value%identityAlignment
AT3G27650.1 LOB domain-containing protein 256.7e-3055.86Show/hide
Query:  TQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKEL
        + Y  SPCAACKFLRRKC   CVFAPYFPPEEP KFANVH++FGASNV+K+L+                  EAR++DPVYGC  AI  LQ+Q+ RLQ+EL
Subjt:  TQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKEL

Query:  DAAKAHLFLYS
        +   A L  Y+
Subjt:  DAAKAHLFLYS

AT5G63090.1 Lateral organ boundaries (LOB) domain family protein8.1e-3658.46Show/hide
Query:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA
        Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN                  EAR+RDPVYGC  AI +LQ+Q+ RLQKELDAA
Subjt:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA

Query:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL
         A L  Y  S +   AP +    +  P PL
Subjt:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL

AT5G63090.2 Lateral organ boundaries (LOB) domain family protein8.1e-3658.46Show/hide
Query:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA
        Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN                  EAR+RDPVYGC  AI +LQ+Q+ RLQKELDAA
Subjt:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA

Query:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL
         A L  Y  S +   AP +    +  P PL
Subjt:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL

AT5G63090.3 Lateral organ boundaries (LOB) domain family protein8.1e-3658.46Show/hide
Query:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA
        Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN                  EAR+RDPVYGC  AI +LQ+Q+ RLQKELDAA
Subjt:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA

Query:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL
         A L  Y  S +   AP +    +  P PL
Subjt:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL

AT5G63090.4 Lateral organ boundaries (LOB) domain family protein8.1e-3658.46Show/hide
Query:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA
        Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN                  EAR+RDPVYGC  AI +LQ+Q+ RLQKELDAA
Subjt:  YYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLN------------------EARIRDPVYGCSAAIYFLQKQLQRLQKELDAA

Query:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL
         A L  Y  S +   AP +    +  P PL
Subjt:  KAHLFLY--SCTDFSAPFSSQPQIISPDPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAACAACAAAAACACAATATTATTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCTTAGGAGGCTGTGTGTTTGCACCATATTTCCCACCAGA
GGAACCTCGAAAATTCGCCAACGTCCACAAGGTTTTCGGAGCAAGCAACGTTGCGAAGCTCCTAAACGAAGCCAGAATCCGAGATCCTGTTTATGGGTGCAGTGCTGCAA
TTTACTTCCTTCAAAAACAGCTCCAAAGGCTCCAAAAGGAACTTGATGCTGCTAAAGCTCACCTTTTTCTCTACTCTTGCACTGATTTTTCAGCTCCCTTTTCATCCCAG
CCTCAGATTATTAGTCCTGATCCACTGATTTGGAATAATAACAATCTTTATGATGATGTTTGTGCTAATAATTCTTCTGTGTATTTTAATGGAGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAACAACAAAAACACAATATTATTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCTTAGGAGGCTGTGTGTTTGCACCATATTTCCCACCAGA
GGAACCTCGAAAATTCGCCAACGTCCACAAGGTTTTCGGAGCAAGCAACGTTGCGAAGCTCCTAAACGAAGCCAGAATCCGAGATCCTGTTTATGGGTGCAGTGCTGCAA
TTTACTTCCTTCAAAAACAGCTCCAAAGGCTCCAAAAGGAACTTGATGCTGCTAAAGCTCACCTTTTTCTCTACTCTTGCACTGATTTTTCAGCTCCCTTTTCATCCCAG
CCTCAGATTATTAGTCCTGATCCACTGATTTGGAATAATAACAATCTTTATGATGATGTTTGTGCTAATAATTCTTCTGTGTATTTTAATGGAGGAATTTGA
Protein sequenceShow/hide protein sequence
MESTTKTQYYYSPCAACKFLRRKCLGGCVFAPYFPPEEPRKFANVHKVFGASNVAKLLNEARIRDPVYGCSAAIYFLQKQLQRLQKELDAAKAHLFLYSCTDFSAPFSSQ
PQIISPDPLIWNNNNLYDDVCANNSSVYFNGGI