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Sed0009014 (gene) of Chayote v1 genome

Gene IDSed0009014
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 33
Genome locationLG04:37708847..37709333
RNA-Seq ExpressionSed0009014
SyntenySed0009014
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]2.3e-1569.44Show/hide
Query:  LVLLVCSFISETRLL---------SSSVNSKNELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
        L+LL+CS ISE+RLL         SSS N KNELF KN +E+ KFIIEEKEKLG H VSKRLSPGGPDPRHH
Subjt:  LVLLVCSFISETRLL---------SSSVNSKNELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein1.1e-1569.44Show/hide
Query:  LVLLVCSFISETRLL---------SSSVNSKNELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
        L+LL+CS ISE+RLL         SSS N KNELF KN +E+ KFIIEEKEKLG H VSKRLSPGGPDPRHH
Subjt:  LVLLVCSFISETRLL---------SSSVNSKNELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
A0A072V9Z0 CLAVATA3/ESR (CLE)-related protein 337.1e-0441.77Show/hide
Query:  MACLRKMLFRAALVLLVCSFI--SETRLLSSSVNSKN--ELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
        MA  R + F    VLL  S +   + R L SS++S N    F ++VK+V K I+  K+ LG+   + RLSP GPDP HH
Subjt:  MACLRKMLFRAALVLLVCSFI--SETRLLSSSVNSKN--ELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 32.5e-0449.12Show/hide
Query:  ISETRLLSSSVNSK--NELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH
        ++E R   SS   K   ELFE+ +KE+      E+  LG+ + SKRLSPGGPDPRHH
Subjt:  ISETRLLSSSVNSK--NELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCTTCGAAAGATGTTGTTCCGGGCCGCGCTCGTTTTGCTCGTGTGTTCTTTCATTTCTGAAACTCGCTTGCTTTCGTCTTCTGTGAATTCGAAAAACGAGTT
ATTCGAAAAGAATGTCAAAGAAGTGTTTAAGTTTATCATTGAAGAGAAAGAGAAGCTTGGAAGCCATATTGTGTCAAAAAGACTCAGCCCTGGAGGACCTGATCCACGCC
ATCATTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAATCTGTTTTCTTTGATGGCTTGTCTTCGAAAGATGTTGTTCCGGGCCGCGCTCGTTTTGCTCGTGTGTTCTTTCATTTCTGAAACTCGCTTGCTTTCGTCTTCTG
TGAATTCGAAAAACGAGTTATTCGAAAAGAATGTCAAAGAAGTGTTTAAGTTTATCATTGAAGAGAAAGAGAAGCTTGGAAGCCATATTGTGTCAAAAAGACTCAGCCCT
GGAGGACCTGATCCACGCCATCATTGATTATTGCCTTTTTTTTTGTTTTGTTTTGTGTGTTTCATTTTTAGACATCTTTCAATACTGTCTTTGGTTTTTTTTTTGGAATT
GTAAGTTTAATTGAGAGAGAATTATCTTTGTGGGATTTGTAGAAATAATGAATTCTGTTTATTTCTATTCTATACAAATCTATATTTTGTCATAATTAACTTAGAGTTCT
CATTTTGTTTAGTACGTGTAAAGAGTAAACGTGTTAGTGACAACCGG
Protein sequenceShow/hide protein sequence
MACLRKMLFRAALVLLVCSFISETRLLSSSVNSKNELFEKNVKEVFKFIIEEKEKLGSHIVSKRLSPGGPDPRHH